Basic Information

Gene Symbol
JARID2
Assembly
GCA_028455805.1
Location
CM052193.1:9200847-9208892[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.7e-23 2.5e-19 69.6 0.1 6 89 1316 1397 1312 1397 0.93

Sequence Information

Coding Sequence
ATGGTGCTAAGTCGAAATGATAAAAGAAAAAGAAAAGAAGGAGATCTGGTGGATCTTATGGAACCACTATCAGAGTCTCCAAAGAGAACCAAAATACGTGCACAAAGAAAATTTGCACAAGGTGCAACTGCAGTATTCAATCCGTCGCATACTCCAATTAAGGACAAAGAAAAAGTCAAACCACCGATTACAACGGAATTAATAACACATAAACGACCGAATACAGTGGATTTCTTGACATTTTTATGCTTCAGAGGAAAATCAATTTTACCTTCAAGTTTGAATTTCTTCAATGTCAGCAACAAAGAAGAAAAACAAAATGCCAAAACAATGCGTGTATCGACAGACAAAGTTACATCTTCGTCCAGTACATCCACCGACAATCAAAAACCAGATCCAAGTCAGAAAACTATCACCAAGACAAAATCAATTATTACAGATAAAAAGAATAACACGTTACAAAAAAGTATTAATAAATACAAGACCACAACGTCTACTGTGCAAGCGCTTAAGAAAAAGTATCAAGGACAACGTCTAGCCAAGCAAAGAATAAAAAATAAGTTCAAAACATCTTGTGTTATGAGAACAAGGTCTTGTACAGAGAGAACACTTTTAAAGTCTACGAATAAACTGGCGCTAAGGAAATTTCTGCCAAGGATCGAAACCAAAAGACTTGGTTTACGGAGTAGTGTGCTTACAGATAAGACAAAGAAAACTTTTCCAAAAGTGAAACCTATGCCATTAAAACCAAAGAAAAAAGCTCTTGTAAAACAGAAAAACAGCGATACATCTGAATCAGAATCTACATCCGAAGAGGAAGAAGAGGAGCAACCTTCAGAAAAATCAGTACCACAATTAAAACGTACAGTACAAAAAACTGTTCAGAAAAAAATCTGTACAAGAAGCAAATCCGAAATGAGAAGAATTACTCGTTCCCATAGTGGAACAGTTTCCCCAAAAAATCTTTGTAGAAGACCATCTAGAAAAACTAAAGAAGCAGCAGCAGAATACATGGAAATTCTAGGAAGAAAACTTGTGAGTCCGGACTTGGAAAATGATGATAATGTCTCTATGGATAGTTTTCCAGAACTGCCAAATGCACGCAAAATTGCACAAACTGAAAGTGAAATTAAAGCCAAAGTGAAACAGCCAATTACAAAAACAATTAATAAAACTAAAGATGGTAAGATTACCTCCATCCAAAGCGCATCTAATAAACGACCAGACAAAACTAGAACTAGCAAAATTACCTTTAAAAGTAAACGACTAATAAGAGTTCAAAGATATTGTGAAATAGATACTGACGAGGAATCTGTTAGTTTCAATGAAACCAGTAACACAAGACCAGTCACAAGAAGAAGCTTAGGAAAACTAAATAAACCTGTTAGTAGATCTCTTAGGTCTTCTTCTAAGACTGTAGTCACGCGGATGGAAATTCAAAACAATGTTAACATTAAATCAAAATCTCAGGTTCAAAATAATCTAAGGTTCAACAAGGAAAAATTTATAATGAAACGTAAACGAGAACAAAATTTTAATAAATTATCGTCTGAAAAAACCAGTGGATCAAAGCAAAAAGTAACTAAAAATACTGTTAATGAAAATACAGATTCTGATGAAGAAACGTTAGatgacaataatgcaaataaagttgtagagcatacagacgaacattctgtaaagatCGATCTTTCGAAAGCATCAGATGATGAGGAATCTTTTCGGGGGTTTTCAAAGAAAGCAATATCAAAAGTATTGAACTCCTGTCAGACGCACGTTAATGCTAATCTTCTTGTTACTGAAAAATCCGTTGAAAAGTTGGAAATAATTGAAACAGAAAAAGTGGAGAACATAGATACACCTAAAGAAACTGAAATTAAGGATAAATCTTTAGCAATTAAAAATTCTTTCCCTGCTGCGAATGTATCAAATGACGAATGTAATAAATCTGAGATAGGTCAAAAAATGAAATCGGAAGTGTTCAATGAATTGGAGTCACAAACAACATTGATAACCAGTACAGAAAAAGAATATCTTCATAAAACAGAAATTTCTTCTACAAACGTTGTAGACATGTCTCTATCAACGTTACATGTAAGAAAAGAAAAAGTAAACATGTCAACCGAACAGATTGAGAAATGGTTGAATGAAAGTTCCCTTGCCAAAGAAGAGAGCAAGTTAGAAATGGAAAATGTATCCATGTTTAAGTATGAAATGTGTGAGAAAAAGAGCGATGTCTCGCATTTATCTATTTCAACGAAAATTCAGCATTTAGTAAGGCCAGTGAATGTCACGCTTTCGAAATTAACAGAGAAAGCAAGCATGAAAGATCGTTTAAGTGTACAGAACAAATATGTCCCTATTAAAATAGTGGATTTACAATCTGTTGATGCAAAACAAGAAAATGAATCGACCAGTGGTGTTAACAAAAATAATGCAGACCTTAAAGAAATAGCTAAAGGAAAAGATACAAAGCCAAATAAAGACTCCAGCCCTGGGGAAGAGAATGACGCAGCATTAAAGTCCGATCACAGTTCAGGAGATGGATCTTCGGAGAAAAAGTTACCGCTAGAAAAGAAATCTATATTTCAACCGAGGAAACCATTTTTACCAAAAGTTAAAGAACGTAAAACAGTAACTCCTAACGCAAATGCATTTTCTCCAGAAAATGAAAGTAGCGTTTATGCGTTTGAAAGTGATACTGAAGTTCCTGTTAATACACCTTTTAGACGTAAAATTCGTGAATCTAATAAGTTATCGAATGCATCACCGGAGAATGACACACATAAAAATGTAGACAAAGTCAACAAAGATGATAGTCAAACATCAGAATCGAAGGAGACTCCTGCTAGTAGTATATCTCCAAAAACTGAAAATAAAATAGTAGAATCGATAAATACATCAAACTCGTTATTAAATATTAATAGGTTCGAGTTACCTAAAAATTTTGCTACCTTAGCCAATATACAAGTTTTACCATTAGATAAATTAACAACAACTTGGAGCAATGTGAACTGTAGTGCTTCGATAGCTGTTCAAGTGAATCTTGATGATAATGCACAAGCGCAAGAACAGACGACAGGGGAAAAAGATGCGAATCAACAAAAAAGCACTGAAACATCTACTCAAACTGAAAGCAGTAATGAAAATGATGATGAAAACGATGGTCAACTATTTTACATACCTTTGCAAGCAGTTACGAGAAATGGACCAAATTTAGTTCAAGGACAACAGTTGATTCAAGGTGTAGCTGTTAAACTTGGTACCGAAGGGCCAAATGGACCTAATCAGAAAGTTCTTTTGAGAGCAAAGTTAGTTACTAAACCGCCATCATCGATTGCACGTTGTCCTCCTATAGGTACAGTGCAACCTACAACACGTACGCCACCAAACTCAACTCTATTATCAGCAGACAATCCATTACCATCTACTTCATCCAGTACAACTTCAGTTATGGCCGCACCAAATTCTGAAATCCCACCATCTTCCCCGTGTAAAAGTGAAACTACACTACGAACATCGAGTAGACAGAGCAGTAGGTCTGTAGCAACAGAAAAATTAACAAAATCTCCAAAAACTTCTAGGGAAAGAAAAACATCTATTGATTCAAATAAGAATGGGAAGAGATTTCAAATTAAATCTAAACAGAAAAATACTGTAATTTGTTCTCCAACAAAGAATGTAACTTTTCCGAGTGCGAAAAATGAAAACAATGAAGCACGCTTAGTGGAAGCACCTACATTTCAGCCTAGTGAGAAAGATTTTCAAGATCCTTTAGAATATATAGACAAAATAAGACCAATCGCAGAGAAATTTGGAATATGTAGAGTTGTGCCACCACCTAATTTTAAGCCGGAATGTAAAGTATCAGACGATATGCGGTTTACCGCGTACAATCAGTATGTACATCGTATGCTTCATAGATGGGGACCTAACGTAAAAGAAATGATGGCTATTAAGAAATATTTAGCTACACAAAGCATAACTCTCACTCAATCGCCTTGGATTGGTGGGATGGAAGTTGATTTGCCTCACTTGTATCAAACAGTTCAAAGTTTAGGTGGATTAAAAGAAGTTATTGAGAAGAAGAAGTGGCAAAAAGTAGCTGATGGTATGAAAATACCAAAGTCTGCTCAGGATCGTGTAACTAAATTAGATGACATTTACTGTAAATATTTATTACCATACGACACATTATCTCCAGAGGAACGAGGTAAATTGTTTGATGAAGTTGAATCAGACTGGATGAAACGAGAAAGCAGAGCATTGCAAAGACAAAACGCACCCGTAAATGATAACGAGGAAGATGAAGAGGACGATAGCTCTGATGAATTTGAAGAATGCATTGTAAAAGGTAGAAATATGCCATTAAATGCTTTCTACCGAATTGCGAGAAATACGCAGCGTATGTGGTTCGGTGAGAACCAGCGATCTGGAAACGAAACTGAGGGTGCCTCCGCTGATGAGGTTGAAAGAGCATTCTGGAAGCATGTTGCAGAAAGGAAGCGACATGTCAGTGTACATGCTGCAAGCATCGATTCTAGCGGTCGTGGTTTTGGATTCTCTGTTGCCAAAAATAGTCCGTTCGCTAGACACCCATGGAATCTTAAAGTGTTTGCTAATAATGCTGGTTCAGTGGTGAGAGCATTAGGCCCAATAATTGGTGTGACTGTGCCAACACTCCATGTTGGCATGCTATTTAGCGCATGTTGTTGGTACCGTGATCCTCACGGTCTTCCATGGATAGAGTATTTACACACGGGTGCCAAGAAAATCTGGTATGGTATACCGGACGAGCATAACAATAACTTTAGGGAAGCACTGTCAAAAATGGTGCCACGATATTGTAAAAATAAAACTATATGGTTACCATCTGACACAGCAATGGTTCCTCCGGAACTATTGGTTAATAATGGAGTATCACTATGTCAAACTGTACAAGAACCAGGCCAATTTATAATTGTATTCCCCAAAGCATTTACATCAAGTATATGTACTGGTTATTTAGTATCTGAAAGTGTTTACTTTGCACAACTGTCTTATTTGGAAACTGCTGAACAAGTGTTTAAAGATATACAAGATAGCTGTGAACCATGTATGTTTTCATTCGAAAGGTTGATATTTAGCATTATTAATGACACCAGATCCCATGTAGATGTAATGAAAAAGATTTTACCAAGTGTGATTAAAATTCGAGAAAAGGAAATAACTTACCGAAAACAATTAAAAGCAGTGGGTCTTACAAATACACAAAGATTAGCATTACCAGATAGTGGAAAACGAAAGAAAGGGAAAAAAGTAAAACAAAACGATGGAGAATTTGAATGCGAAACTTGTAGAGCTAATCTATTTCTTTCATTAGTTAGTAATTCACAAGATGATAGTGTTTATTGTCCACCACATGCATTGCAATTACTTAATAGGAAGAAGCAAGCTATAAAACACTGTACTTTGATATATAGGTACAACGAGGATGAATTGGATGATTTAATTCACATATTAGAAGACAGAATTGAAACCAAATCTAAAAAGACTAATCAAATTAAACAAGCTAAATAA
Protein Sequence
MVLSRNDKRKRKEGDLVDLMEPLSESPKRTKIRAQRKFAQGATAVFNPSHTPIKDKEKVKPPITTELITHKRPNTVDFLTFLCFRGKSILPSSLNFFNVSNKEEKQNAKTMRVSTDKVTSSSSTSTDNQKPDPSQKTITKTKSIITDKKNNTLQKSINKYKTTTSTVQALKKKYQGQRLAKQRIKNKFKTSCVMRTRSCTERTLLKSTNKLALRKFLPRIETKRLGLRSSVLTDKTKKTFPKVKPMPLKPKKKALVKQKNSDTSESESTSEEEEEEQPSEKSVPQLKRTVQKTVQKKICTRSKSEMRRITRSHSGTVSPKNLCRRPSRKTKEAAAEYMEILGRKLVSPDLENDDNVSMDSFPELPNARKIAQTESEIKAKVKQPITKTINKTKDGKITSIQSASNKRPDKTRTSKITFKSKRLIRVQRYCEIDTDEESVSFNETSNTRPVTRRSLGKLNKPVSRSLRSSSKTVVTRMEIQNNVNIKSKSQVQNNLRFNKEKFIMKRKREQNFNKLSSEKTSGSKQKVTKNTVNENTDSDEETLDDNNANKVVEHTDEHSVKIDLSKASDDEESFRGFSKKAISKVLNSCQTHVNANLLVTEKSVEKLEIIETEKVENIDTPKETEIKDKSLAIKNSFPAANVSNDECNKSEIGQKMKSEVFNELESQTTLITSTEKEYLHKTEISSTNVVDMSLSTLHVRKEKVNMSTEQIEKWLNESSLAKEESKLEMENVSMFKYEMCEKKSDVSHLSISTKIQHLVRPVNVTLSKLTEKASMKDRLSVQNKYVPIKIVDLQSVDAKQENESTSGVNKNNADLKEIAKGKDTKPNKDSSPGEENDAALKSDHSSGDGSSEKKLPLEKKSIFQPRKPFLPKVKERKTVTPNANAFSPENESSVYAFESDTEVPVNTPFRRKIRESNKLSNASPENDTHKNVDKVNKDDSQTSESKETPASSISPKTENKIVESINTSNSLLNINRFELPKNFATLANIQVLPLDKLTTTWSNVNCSASIAVQVNLDDNAQAQEQTTGEKDANQQKSTETSTQTESSNENDDENDGQLFYIPLQAVTRNGPNLVQGQQLIQGVAVKLGTEGPNGPNQKVLLRAKLVTKPPSSIARCPPIGTVQPTTRTPPNSTLLSADNPLPSTSSSTTSVMAAPNSEIPPSSPCKSETTLRTSSRQSSRSVATEKLTKSPKTSRERKTSIDSNKNGKRFQIKSKQKNTVICSPTKNVTFPSAKNENNEARLVEAPTFQPSEKDFQDPLEYIDKIRPIAEKFGICRVVPPPNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTQSPWIGGMEVDLPHLYQTVQSLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEERGKLFDEVESDWMKRESRALQRQNAPVNDNEEDEEDDSSDEFEECIVKGRNMPLNAFYRIARNTQRMWFGENQRSGNETEGASADEVERAFWKHVAERKRHVSVHAASIDSSGRGFGFSVAKNSPFARHPWNLKVFANNAGSVVRALGPIIGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNNFREALSKMVPRYCKNKTIWLPSDTAMVPPELLVNNGVSLCQTVQEPGQFIIVFPKAFTSSICTGYLVSESVYFAQLSYLETAEQVFKDIQDSCEPCMFSFERLIFSIINDTRSHVDVMKKILPSVIKIREKEITYRKQLKAVGLTNTQRLALPDSGKRKKGKKVKQNDGEFECETCRANLFLSLVSNSQDDSVYCPPHALQLLNRKKQAIKHCTLIYRYNEDELDDLIHILEDRIETKSKKTNQIKQAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01070844;
90% Identity
iTF_00860917;
80% Identity
-