Basic Information

Insect: Lasioglossum calceatum
Gene Symbol: -
Assembly: GCA_963966675.1
Location: OZ016549.1:8884391-8893773[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0004 0.043 14.9 0.7 2 19 468 485 467 489 0.89

2 17 8.4e-06 0.00092 20.1 2.1 1 23 495 517 495 517 0.98

3 17 0.00035 0.039 15.0 0.1 3 23 525 546 523 546 0.94

4 17 1.1 1.2e+02 4.0 1.2 1 23 553 576 553 576 0.97

5 17 9.7e-05 0.011 16.8 0.8 1 23 580 602 580 602 0.97

6 17 0.0032 0.35 12.0 0.5 1 23 608 630 608 630 0.98

7 17 0.00019 0.021 15.9 2.3 1 23 636 658 636 658 0.96

8 17 0.003 0.32 12.1 0.1 1 17 663 679 663 680 0.90

9 17 1.1 1.2e+02 4.1 1.7 1 23 1197 1220 1197 1220 0.97

10 17 0.00013 0.015 16.4 1.2 3 23 1228 1248 1226 1248 0.97

11 17 0.11 12 7.2 2.5 1 23 1254 1277 1254 1277 0.92

12 17 1.5e-05 0.0016 19.4 0.4 3 23 1285 1305 1283 1305 0.96

13 17 0.53 58 5.0 0.8 2 23 1312 1334 1311 1334 0.94

14 17 0.00059 0.065 14.3 3.5 1 23 1338 1360 1338 1360 0.98

15 17 0.027 2.9 9.1 0.7 1 23 1365 1387 1365 1387 0.98

16 17 5.2e-07 5.6e-05 24.0 0.7 1 23 1393 1415 1393 1415 0.97

17 17 6.8e-05 0.0074 17.3 1.5 1 21 1420 1440 1420 1441 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0004	0.043	14.9	0.7	2	19	468	485	467	489	0.89
2	17	8.4e-06	0.00092	20.1	2.1	1	23	495	517	495	517	0.98
3	17	0.00035	0.039	15.0	0.1	3	23	525	546	523	546	0.94
4	17	1.1	1.2e+02	4.0	1.2	1	23	553	576	553	576	0.97
5	17	9.7e-05	0.011	16.8	0.8	1	23	580	602	580	602	0.97
6	17	0.0032	0.35	12.0	0.5	1	23	608	630	608	630	0.98
7	17	0.00019	0.021	15.9	2.3	1	23	636	658	636	658	0.96
8	17	0.003	0.32	12.1	0.1	1	17	663	679	663	680	0.90
9	17	1.1	1.2e+02	4.1	1.7	1	23	1197	1220	1197	1220	0.97
10	17	0.00013	0.015	16.4	1.2	3	23	1228	1248	1226	1248	0.97
11	17	0.11	12	7.2	2.5	1	23	1254	1277	1254	1277	0.92
12	17	1.5e-05	0.0016	19.4	0.4	3	23	1285	1305	1283	1305	0.96
13	17	0.53	58	5.0	0.8	2	23	1312	1334	1311	1334	0.94
14	17	0.00059	0.065	14.3	3.5	1	23	1338	1360	1338	1360	0.98
15	17	0.027	2.9	9.1	0.7	1	23	1365	1387	1365	1387	0.98
16	17	5.2e-07	5.6e-05	24.0	0.7	1	23	1393	1415	1393	1415	0.97
17	17	6.8e-05	0.0074	17.3	1.5	1	21	1420	1440	1420	1441	0.95

Sequence Information

Coding Sequence: ATGGAGCTGGGGGAGGGACAGGCGAGAATTTGTCGACTTTGTGGCCAGTACGATAGCATGTACATCGACGTATTCAGCGATGAAGGCACCAAAAGACTTTTAGGCCTGAAAATCCATTCGAAAATCAACATTCTGATAGATGAGAGGGATCCTCTGCCCAAGGCGATCTGTGTTCAGTGTCTGGGCAAGCTCGAATTCGTTTGCGACTTCCAAGAGGAGTGTCTTCGCACCCAACAAGTGTTACGCGATCGATACAATCTACCATCCTTAACAGAGATTGCTGAAGTAAAGACTGAAGAAACAGCACCAAGCACATCGacaaacaataacaacaacgacATCGACAAAAACCTTAATCCTCCAGCCAAGGGAAGTGTTAAAGAAGTAGCACAACGCGTTTCGAAAACGACAGCGAAGACTCAGAGAAATTTACGAAGTCAACATCAAGCGAACAGTCACAGTAATGGTATCACTAGCAGCAGCAGTAACAGTAACAATAATGGCAATGGTATCAGTAACGAAGCTGCTAAAGATCAAACCACCGCTGAAAGCACAACAGAGGATAATACAGACAATATCGAAATTGTTCAGAGCATTGGAAATACACCCACGAGATGGCTCAGAAGTAGGCAAAACACAGAAACTACTTTGACGAATGAAGCAACAACCAATATACCGATCGCGAATAGGCTTAGAAGTCACGTTAGTACCGCTGCAGAGATAAGCGTGAATAGTCCTCGCAGTAATTCCAGCGAGACCAGTGGAAAACAACAAGATCCTAACACCATACAAATCCCAACGTCCGCTTTGAACAAGCTTCTGACCATTGTGTCGAATTCGCCAAACATAGAAGTGTCCGCAAAGGAATCGAGAAACCAAAGCATCGACACGGAAGATATCAGTTTCACGGTCGAATTGTGTAAAAAGGAGAGCGACGACATTGAGACGGTACGAGCCAGAGTATTTCCAGATCAAGGCTCGTGTTTGGTAGACCAGTCTATCGTTGGTCTTCTACAAAATCAAAGTTGCGTAGAGGTGAACAGTATAATAAACACTATCCTCAGTAGCAGTGTAAAGAATGGTAGTTCGACAAAGTCAAAGGATTCGGCCGAATTTGAGCAAAAATGGCGGGCTTCTCAGAACCCGGAACAACTGTTCAAGATCGATGGAGAGGAGATTCGCGTGGACGACAATGTGGAACACATCGTGACGGATAGTCAGAATGGTTACTCGTGCAAGCTGTGTTGTAAATTCTACGAACGTAAAGACAAATGTATGGTTCACGTGAAGACACATCTAGGGATCAAacagtacacgtgtattttatgCAACGCGAAATTCGTATGCAAGTCCGACGTGATGAAACATATACGGTGCTCGCACACCAATCCTAGACCGATACAGTGTCCAAAATGTCCAAAGAGGTTCAAATCCAAGTTTTATCTAATGGAGCACGACAACGTGCACAAAGGCGTGAGGCCGTACGCTTGCCCGGATTGCGGTCAGAGTTACCATCACAAAGTATCGTTGCAGATACACATGAAATCGCATTTACCCCCACAGAACTTAGCTTGCGAGTATTGCGGTAAAGTGTTCCCGTATCGTACGAGACTGTTGAGTCACATCGCCAGCGTTCACCTGAAAAATCGTCGGAACTTCAGGTGCCGATTTTGCTACAATCTCTATTCGAGTCTTGCGGTTTTAAACGAACACATTAAAACGCGTCACGCGACTACCTACACTTGCGAAGTGTGTACCAAAACGTTCAAAGTCGCGTCAAAATACAAGGCTCACGTGTTGCAGCACACCAACCCTAAGCCTTTCGTGTGCACCGTTTGTAACAATAGATACGCGTCGAAAGCATTCCTGAACGAGCATCTACTGAAACACGAAGGGCTGAGGAAACATATTTGCCAAAAGTGTGGCGCGAGATTTGCCCAAGCTAGTCACTTGGCCGCGCATCGGCACGTGCACGGCGAAAAGAAGCACGCTTGTCCGGAATGCGGGCGAAAATTTAACAGACGCGACAACATGAAGATAAAGGAGAACGACGGATTGCCGCACGTTGTTTGCTTGCGGTGCATTGGCGCGTTGGAGTTCTTGTGTGACTTTTACAGCTGTTGTCAGCTCACCCAAAACAAACTCTCCTTGTCGGAGGAAGCTAGCAAATACTCATCGGAGAATACACCTAGAAGAATACCGCAGCAGGAAAACGATGCGGAATCTAACAAGGAGAATGTTCTGCCATCtgcaaacgaaacgaaacgaagagGCAAAGTTGCATCGCCCACCAAGAAGGACCAGGCTACAAATGAAAACACATTGGACGATAGAAAACAGTCGGCTACGAACAACGCGATTGTTCAGGATCAAAATTTGAAGGACGAACAAAGCAACGACAATGCTTTAACACGCGGAAATCCGTTGTTGATGAAGGATATCTCGAAGAAAGGGTCGAAATCCTTGAACAGCTGTACAGTTTCAATGAAAAAAGACGAAGCGAACGATAAAATAGCTTTAGTAGAACCAAAACGACCCGCAAGAGGCCGGAAACCTCAATTACAGAAACTTAGAGAAGTTTGTGTGTCCTCGAATAGAATGAAAGAATCTCAGAAAGGTTCTGATGAGACGGAACGCGATGGGAATCAACGTAAGAGAAAGTGTCTGGGTACAATTTGCACGAACGGTATATCGAACGTAACCAAGAACGCTGCGATCTTGTCCAATCCGCAAATCGAGCTGCCATTGGAGAATAAAGTAGCAACGATAGCGACGATACCGTCGAGTAAACGCTATATTGAAAATGATGATGCGAATAAAGATTTAATCGGCGACGTAGCGGAGGTGACTTTGAAGGACGAGTCTTCAAACGAGGAAAGAAAAGAGGAGGGCCCCACAAAAAGCAAAGCGATATCTGTAATCGTGAAGCAAGAGAAAGCAGACGTAGAAGTAATTTCACAAGAAACTGGTAAACCGAATCAACTGGTTTGGATTCCAAATGAGATGCTGACAGAGGGACAACCGATCGATCAGGAACAAGAAATTGACCTGGACTTATCGTTACGGCTGAGTCCTGAATTGGACGATGATACGGAAACTTCTGATGTCGTCACTGCTCGTACCGATTCAAACGATTCAAACGATTCAAGCGATTCAAACGATTCAAGCGATTCAAGCGATTCAGACGATTCAGACGATTCAGACTATACCGACGATACCGAGCAGCCGAAAACAAATCTGCCGTCCGTAGAACAAACTCGCGCGACCGTTATAAGATCGTCGCGGGAAAGTCCTGTACCGGTAGTCGTTAAACCGGATGAGACCAGCAATATCGATGGTACCAAAAATAATTCGAGATCCGATTTACAGTTTTCCCGGGGTAAGATTTCCGAATTGATAAGCGAGAAGCAAAAAGAAGAGATCGAGACTTATTATAGAATTGATATGTCTGCCGTTAATGCGGAAGAAGTACAAAGAAATTTGACGGTAACCGACAAGAAGAACATTCGTTGCAACATCTGCGGAAGTTTTTATCTTCGGATGGACAAGTGTCAGGTACATATTTGGGGCCACTTGCAGATGAAACCGTTCCAATGCAAAGCGTGCGACTTCGCTACGGTAACTGTTAGCAACGTTCGTTGCCATATCAGGAAGAGTCATTTAAAGATCAAACCGTTTGGATGTAAACTTTGCGGAAAGAGTTACTCCACTTGCGGGTTATTGATGCAACATATTAATGGCCACACAGGAAACCGTCCATTTGAGTGTAAGATTTGCGATTTTCGTTGCGCGACTCGACAAATGCTAAGCTATCACAGCAGTGTTAATCACAAACCACTCAAGgaaatcaattgtaaaattTGTGGCATAGAATTCTATTCGAGAAGCAAATTACGCACGCACATGCTCGTTCATAAGAAAGATAAAGTGGTCATGTGTAAACTATGTTCCGCTTATCTATCAAACGCGAAAGCATTGGAAACACACCACAAGAACCTTCACATGCAAGACTATGTCTGTAACATATGTGGCAAACATATGAAATCGAAAAAAGCCTTGCACAATCATCAAAACGTACATTCTACGGGAAAGTACAAGTGTACTTTATGCCCAAATGTGTACAAGAGCAGTCAAATACTGAAGGAGCATCTCTTGAAGCACGAAGGAATTAGGAAGTACAGGTGCAGTGATTGTGGCAAGACATTCGGACAACAGTCTCACTTGGCTGCTCACAAGGCAGTGCACAGCGGTGTTAGATTCTATTGTCCTGGATGCGAGAAATCTTTCAATCGTCACGACAACATGAAGATACATACGAAACGGTGTAAACCGTTCCTCGCAAATCCAGAACTGAAGAAGCTCTtaataaagaaagaaaggagTTCTTCGACTAGCAAAATAAACAAGTCAATCGAAGATACGACCAGTAAGGATTCTTCATCGTTGAATTTCGAAAGTTTCTTCGAGAAAGAGACCGGCAATGAAGAGATATCGATAAAGACTGTAAACGACAAAGAAGAGACTGCAATGAAATTAGGGTTGAATATCTCTTGCATCGAATCCCCGGATAAATCGTGGATTCGCGATAATGTGTATCAAGAGATTTGGGATCGGAAAGTTTCCAATTGCTTCTTGATGGAAGCGTGGCTAGAATCGATACAATCTCTGCACGTGCGCAAATCCCATTACGACAGTGCCGAACAGTACAAATTAGTAGAGTTCATTACTATTCAATGA
Protein Sequence: MELGEGQARICRLCGQYDSMYIDVFSDEGTKRLLGLKIHSKINILIDERDPLPKAICVQCLGKLEFVCDFQEECLRTQQVLRDRYNLPSLTEIAEVKTEETAPSTSTNNNNNDIDKNLNPPAKGSVKEVAQRVSKTTAKTQRNLRSQHQANSHSNGITSSSSNSNNNGNGISNEAAKDQTTAESTTEDNTDNIEIVQSIGNTPTRWLRSRQNTETTLTNEATTNIPIANRLRSHVSTAAEISVNSPRSNSSETSGKQQDPNTIQIPTSALNKLLTIVSNSPNIEVSAKESRNQSIDTEDISFTVELCKKESDDIETVRARVFPDQGSCLVDQSIVGLLQNQSCVEVNSIINTILSSSVKNGSSTKSKDSAEFEQKWRASQNPEQLFKIDGEEIRVDDNVEHIVTDSQNGYSCKLCCKFYERKDKCMVHVKTHLGIKQYTCILCNAKFVCKSDVMKHIRCSHTNPRPIQCPKCPKRFKSKFYLMEHDNVHKGVRPYACPDCGQSYHHKVSLQIHMKSHLPPQNLACEYCGKVFPYRTRLLSHIASVHLKNRRNFRCRFCYNLYSSLAVLNEHIKTRHATTYTCEVCTKTFKVASKYKAHVLQHTNPKPFVCTVCNNRYASKAFLNEHLLKHEGLRKHICQKCGARFAQASHLAAHRHVHGEKKHACPECGRKFNRRDNMKIKENDGLPHVVCLRCIGALEFLCDFYSCCQLTQNKLSLSEEASKYSSENTPRRIPQQENDAESNKENVLPSANETKRRGKVASPTKKDQATNENTLDDRKQSATNNAIVQDQNLKDEQSNDNALTRGNPLLMKDISKKGSKSLNSCTVSMKKDEANDKIALVEPKRPARGRKPQLQKLREVCVSSNRMKESQKGSDETERDGNQRKRKCLGTICTNGISNVTKNAAILSNPQIELPLENKVATIATIPSSKRYIENDDANKDLIGDVAEVTLKDESSNEERKEEGPTKSKAISVIVKQEKADVEVISQETGKPNQLVWIPNEMLTEGQPIDQEQEIDLDLSLRLSPELDDDTETSDVVTARTDSNDSNDSSDSNDSSDSSDSDDSDDSDYTDDTEQPKTNLPSVEQTRATVIRSSRESPVPVVVKPDETSNIDGTKNNSRSDLQFSRGKISELISEKQKEEIETYYRIDMSAVNAEEVQRNLTVTDKKNIRCNICGSFYLRMDKCQVHIWGHLQMKPFQCKACDFATVTVSNVRCHIRKSHLKIKPFGCKLCGKSYSTCGLLMQHINGHTGNRPFECKICDFRCATRQMLSYHSSVNHKPLKEINCKICGIEFYSRSKLRTHMLVHKKDKVVMCKLCSAYLSNAKALETHHKNLHMQDYVCNICGKHMKSKKALHNHQNVHSTGKYKCTLCPNVYKSSQILKEHLLKHEGIRKYRCSDCGKTFGQQSHLAAHKAVHSGVRFYCPGCEKSFNRHDNMKIHTKRCKPFLANPELKKLLIKKERSSSTSKINKSIEDTTSKDSSSLNFESFFEKETGNEEISIKTVNDKEETAMKLGLNISCIESPDKSWIRDNVYQEIWDRKVSNCFLMEAWLESIQSLHVRKSHYDSAEQYKLVEFITIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00863429;
90% Identity: iTF_00863429;
80% Identity: -