Basic Information

Insect: Lasioglossum calceatum
Gene Symbol: ken
Assembly: GCA_963966675.1
Location: OZ016546.1:8274865-8277480[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0015 0.16 13.1 4.6 1 20 68 87 68 89 0.94

2 15 0.0058 0.64 11.2 0.7 1 23 136 159 136 159 0.92

3 15 0.0005 0.055 14.5 1.8 1 23 191 213 191 213 0.98

4 15 1.9e-05 0.0021 19.0 1.6 1 23 219 242 219 242 0.96

5 15 2.2e-06 0.00024 22.0 0.3 1 23 248 270 248 270 0.98

6 15 8.5e-08 9.3e-06 26.4 1.0 1 23 276 298 276 298 0.99

7 15 4.2e-06 0.00046 21.1 0.5 1 23 304 326 304 326 0.98

8 15 8e-06 0.00087 20.2 1.6 1 23 332 354 332 354 0.96

9 15 1.5e-06 0.00016 22.5 1.4 1 23 410 432 410 432 0.98

10 15 5.9e-05 0.0065 17.5 2.5 1 23 438 461 438 461 0.96

11 15 0.0023 0.26 12.4 1.5 1 23 467 489 467 489 0.98

12 15 2.6e-05 0.0028 18.6 4.0 1 23 495 517 495 517 0.95

13 15 0.00032 0.035 15.2 4.8 1 23 523 545 523 545 0.95

14 15 0.00044 0.048 14.7 2.1 3 23 555 575 553 575 0.97

15 15 0.00034 0.037 15.1 0.3 1 23 582 605 582 605 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0015	0.16	13.1	4.6	1	20	68	87	68	89	0.94
2	15	0.0058	0.64	11.2	0.7	1	23	136	159	136	159	0.92
3	15	0.0005	0.055	14.5	1.8	1	23	191	213	191	213	0.98
4	15	1.9e-05	0.0021	19.0	1.6	1	23	219	242	219	242	0.96
5	15	2.2e-06	0.00024	22.0	0.3	1	23	248	270	248	270	0.98
6	15	8.5e-08	9.3e-06	26.4	1.0	1	23	276	298	276	298	0.99
7	15	4.2e-06	0.00046	21.1	0.5	1	23	304	326	304	326	0.98
8	15	8e-06	0.00087	20.2	1.6	1	23	332	354	332	354	0.96
9	15	1.5e-06	0.00016	22.5	1.4	1	23	410	432	410	432	0.98
10	15	5.9e-05	0.0065	17.5	2.5	1	23	438	461	438	461	0.96
11	15	0.0023	0.26	12.4	1.5	1	23	467	489	467	489	0.98
12	15	2.6e-05	0.0028	18.6	4.0	1	23	495	517	495	517	0.95
13	15	0.00032	0.035	15.2	4.8	1	23	523	545	523	545	0.95
14	15	0.00044	0.048	14.7	2.1	3	23	555	575	553	575	0.97
15	15	0.00034	0.037	15.1	0.3	1	23	582	605	582	605	0.96

Sequence Information

Coding Sequence: ATGACAGCGACGCGCTCGAATAATATTATTCAAACCAATAACAAATGTACAGCTCCGCAGAGACTCGTCGAGGCTAGACGCGCGACAAAACAAACTCACGAAGAGGAGGAGAGTACAGACTCGTCCAGCGATTCCGATAGTTCGGACGAACCTAACGCGACACCCATGCTTCCTTCCAAAGTCGTAGAACACAACGGTCCTCACAGGTGCACCACATGTCAGAGAAGTTTCAAAAGAGAATGTCACTTGGCCCGACACGCGGCCAAATGTTCGAACAGCGTAGACAGTATCGAAGATCGCGAAAGTATATCAAAGGACTCCGAGAACGAGGTCGAGGCCAAGATGAACGACGAAAGAGAAGACTGGACATCGTACAAGAAGTGCAAGAGGAAGCGTCACGAGACGCACCCGTGCATGTACTGCGACTATGTCTCCAAGAAGAAGAAGCTGCTGGAGGTGCACTTGGCGGAGTCGCATTCGGAATTCGTCGGCAAGAAAAACCGGAAACTGAGATGCGTTGACAGAGAGCTGGTGACACGTGCCAGAATGGAAGTCGACGGCAAAGTGTACTACCATTGCGACCAATGCGGGAAAAATCTATACTCGCCGTACACGTTTTTCTGGCACGTGCGAATACACACTGGCGAACGGTCCTATACGTGCCACCTGTGCGGCAAACAGTTCCGAGTAAACCAGGGTCTGGCTAGACATCTCAAGGACACCCACGCTGGGATAAAAAACTTCCCCTGTGACATCTGCGGCCGGATGTTCACCACGAAACGCAACGCGGAGGATCACAGACGTATACACACCGGCGAACGGCCGTACGTCTGCAACGTCTGCGGGAAATCGTTCAAACAAAAGGCCTCGCTGTTCGTGCACAATCGGACGCACACGGATGTGTTCCCGTTCAAGTGCAACTACTGCGGGCAAAGCTTTCGTACGAGGCCACCACTCGCGGTTCACATAACGAAACACACCGGCGAGAAACCGCACGCGTGCGACATTTGCGGCCGACGATTCCGCATCAAGTACGAGCTCAAGCGACACCGGTTGATACACTTCGACGAGAAACCGTGTAGAGATCGACCGCGAGCGGTATCGAACGCCGGTTTGGGGGGTCGCACCCGTGAATCGAAAAAGGCTCGATCGAGTCGAAAAAGACGCACGGTGGAGGAGAGGGAGGAACTGGTCCGCTCGAAAATTAGGAAGAACGGGGTGACGTGTTACAGATGCGACGATTGTGGGAAAACGTTGTCCACAGCTTTCAACTTGACGACCCATCGATACACTCATACCGGGGAGAGACCGTACGCGTGTCGGGTCTGCCGGAAGAGCTTCTGCACGACGTCCGGTTTGAATAGGCACTCTCGCGTCGTCCACGGTGGAATTAAGCGATTCTCCTGCGACATATGTGGCCGTTGCTTGGCTTCGAAAGTCTCACGAGACGAGCACAGACGTACGCACACCGGTGAAAAACCGCACGTTTGCGAGACCTGCGGGAAATCGTTTAAACAGAAGGCATCTCTGCACGTTCACAGACTGTTCCATTCGAAACTGCCCCGGCACCGATGCCCCTTGTGCGATCGTTGCTTTCCGCGAAAGCAGGAGTTAGATAAGCACGTTCACGGCCACGGTCGGGTTGATCAGAGGCCGTACGGCTGCGAAGTCTGCGGCAAACGGTTCCTAAGCAAAGGCTGCCTGAACCGCCATAAAAGGGTCCACGAGGGTCGCGGGAAGCCGTACGTTTGTCCCGTGTGCGACGCGAGATTCGGCCAGGAGCGTTACCTGAAGAGCCACGCGAAGAACTACCACCGGTCCCCATCGGTTTCGCTGGAATGA
Protein Sequence: MTATRSNNIIQTNNKCTAPQRLVEARRATKQTHEEEESTDSSSDSDSSDEPNATPMLPSKVVEHNGPHRCTTCQRSFKRECHLARHAAKCSNSVDSIEDRESISKDSENEVEAKMNDEREDWTSYKKCKRKRHETHPCMYCDYVSKKKKLLEVHLAESHSEFVGKKNRKLRCVDRELVTRARMEVDGKVYYHCDQCGKNLYSPYTFFWHVRIHTGERSYTCHLCGKQFRVNQGLARHLKDTHAGIKNFPCDICGRMFTTKRNAEDHRRIHTGERPYVCNVCGKSFKQKASLFVHNRTHTDVFPFKCNYCGQSFRTRPPLAVHITKHTGEKPHACDICGRRFRIKYELKRHRLIHFDEKPCRDRPRAVSNAGLGGRTRESKKARSSRKRRTVEEREELVRSKIRKNGVTCYRCDDCGKTLSTAFNLTTHRYTHTGERPYACRVCRKSFCTTSGLNRHSRVVHGGIKRFSCDICGRCLASKVSRDEHRRTHTGEKPHVCETCGKSFKQKASLHVHRLFHSKLPRHRCPLCDRCFPRKQELDKHVHGHGRVDQRPYGCEVCGKRFLSKGCLNRHKRVHEGRGKPYVCPVCDARFGQERYLKSHAKNYHRSPSVSLE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -