Lcal021030.1
Basic Information
- Insect
- Lasioglossum calceatum
- Gene Symbol
- SNAPC4
- Assembly
- GCA_963966675.1
- Location
- OZ016552.1:2837793-2840498[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.052 79 4.1 0.1 3 18 168 183 167 184 0.93 2 5 3.5e-12 5.4e-09 36.6 1.1 1 45 272 318 272 319 0.96 3 5 3.8e-08 5.8e-05 23.7 0.3 4 43 327 370 325 373 0.95 4 5 9.5e-14 1.5e-10 41.6 0.0 1 45 379 424 379 425 0.96 5 5 4.5e-11 6.9e-08 33.1 0.1 3 42 434 473 433 476 0.95
Sequence Information
- Coding Sequence
- ATGGATGAGCCAACGGATGACGATGATTTGGAGAAAATCCTATCGTTAGAAATCGATTCTCCCGGACGGGAAAGCGAGCACGATTTTCCGTGTATTTCTCCGGTGGAAAAACCAGTGACGGTCGGTAAGTCGCAAATGTTTCCGAAAGAGTCAACTCAGTCAACGTTTCAAAAGAAACCGGAACATCAAAGGGAAAATATGATTTCGGAATGTAACATTGAGGATTGCGACAAATTATTGAGTTTCAACAGGCAGATCATATCTTTTCTGCTCGATTTAAAGAAACACATAACCTACGCTCTCGAGAAATGTGAAACGAAATTGTCAGTTATAGAGTCCGGCCTTGAGAAACATGCGACCGGAGACAATAGAGCTTTAATTTGCAATGCTGGTATGCCATATTTCAAGGACAGGAATCATTTCTTTGCTCCTAACAACGAGGACGAACTGTTGAAAGAGAATTCTAAGGAATTGCAACTCAGGAATCTTCCCAAAGTAGCACCTTGGACGGTGAAAGAAAGGAACACGCTGCTTAAAGCGATACAGGAAGAAACCGTCGCAGCTTCTATCAAGAGTAACTTTAACGAGCTCGACGAGTCAACGTGCGAGTCAACGTGTGAGTCTTCACAAAAACCCGACAAAAGAACGAAACGCAGAAAGAGAACAGCGACCGATGACCGTGACAATGAGGTGGTCCAGTTGCAAGACAAAGATTTTGACTGGTTTAATATATCGTCTGTTTATTTTGAGGATGTACACTCCCCGCTGGATTGTCGAGTCATGTGGAATGTTTTCCTTCATCCTCGGAATAACAAGAACTCCTGGACAAAGTCGGAAGACATGAAATTAAAAGAGATTGCGAAGAGGTGCAAATATCAGAACTGGGACAGAATCGCGAAGGAGTTGAATACAAATCGTTCCGCTTACCAGTGTCTCATCAGATATAATACGATAAGGAAACTGCAGAAAAATCTTGTATGGAAACCTGAAGAGGACGAGAAACTTTTAAAATTGATCAAAATTTTTCAGATCGGCGACTTTATTCCATGGGGCGAGGTAGCCAGTTGGATGGAGAATAGAACCAAACAACAGATGTACTTCCGATGGACTTATAGTTTGGCGCCGTATCTAATTAAAGGCAGATTTAGCAAATCCGAGGATAATATTTTGAAAGATGCAGTAGCTAAATATGGTACAAATTTTCGTAAAATATCAGCCGCACTGATACCCAACAGGTCGACGGTCCAGCTGCATGATCGCTATCAAACACTGACTCACAGTCAACTCGCAAATTGGAATGTCTGGTCGCTGGAAGAAGATTTAAAGCTAATGGAGCTTTATGAACGTTTCGGTCCGAATTGGTCTAGAATAGCTGAAATGTTTACCTGCAAAACGAGAACGAAGTTGAGACACCGGTACGCTGCTTTACAAAAGTATATTAGCAAAGGTGTATCCATTAACGATTTGCACACGGATAAGAACAGCGAAGTACAACAGGAGACGGGAATCAATTGCGTTAATAAGGGCATGGCGAACAAGGACTGTAGCGAAGACATTGATAAGGAATTGATAAAGTATTTCCATGTAGAAGAAAAGATCAAAAAATCGTTTGGTCACAGAGATCAGCCTTACATGTCCGATGAACTCGTGTGCGATGTGaacaaattatataatattctaCGACAATTAAATGCTCAACTTTCTATTCCCGACGATGCAATTAACAATCCGATGTTAAACGGCAGGCAGAGACAGCTTCTATTCTCGTTGAAGGAATATATGGATATGAAAGACAACAAGGACAGACAACGCATGGTGTTAGACGAGTATAGCTCGCTTATGTTTGGTGTAAATCGCAGTTACGTTGCGGAAATTCCAAGTACAACAAACTACATAGACTGTCGTGTAAATACACAGAGTACCCTTCTAGACGAGAATGCGATAGACTTCGACACTCCAGACGTTGTGGTTTCTCACATCGGTGGCAACGAGCAGGAATTAGAATTTGAGAAGCTCGTTTGTTTGCTTGTGCAGAGTCGTAGTTCAGAAGATAGACGATTAGTGCGAACCACTAAAGGTATTTTGGATCGGAACCACTCTGCTACCAACAGCAGGGACAACAACAATAGAAGCAGCTTGAACTGTAACGTTGTGTCAACGAGAAATATGTCGAACGTTCATCCAAAAGATTCAAGAAACGACGGCAATGTTTTGCTCGTGCAAACCAATGTTCGTGGTCGTATAAATCGTTCAACGTCGTGTTCGCAAAGCGAAAATACGACaagtaatttaaatacattgttcaACGCGTTCGAAACGACACGCGAGTTTCCAGCCACCGTGGAAATACCGAAAGATCCGTATATACCCGCGATCGAATCGACACACTCGACTTTATTCAGTTTTAAGCGTCTCCTCGGTTTGAAACAGAGATTCAACAAAGAACAGAATATTCCACCAAAAGCTCTCACGATGTCGAAGACTTGTCAACGATCGTTGAGTTTATTGGAAACGCGTTtagaacaattatttaaatacccGATCGGTCTGTCGAGGAATTCGTTACCCGAAGTTTATATCATAGATACTTTCTCGTACGACGACATTACATCGCAGAGGAAAGCGTCCGACCCACCGACAATACCAAAACCACGTAAAACGAGAAAGCTTCAAAAATTCGACAAGACTAGAAatggtaataactag
- Protein Sequence
- MDEPTDDDDLEKILSLEIDSPGRESEHDFPCISPVEKPVTVGKSQMFPKESTQSTFQKKPEHQRENMISECNIEDCDKLLSFNRQIISFLLDLKKHITYALEKCETKLSVIESGLEKHATGDNRALICNAGMPYFKDRNHFFAPNNEDELLKENSKELQLRNLPKVAPWTVKERNTLLKAIQEETVAASIKSNFNELDESTCESTCESSQKPDKRTKRRKRTATDDRDNEVVQLQDKDFDWFNISSVYFEDVHSPLDCRVMWNVFLHPRNNKNSWTKSEDMKLKEIAKRCKYQNWDRIAKELNTNRSAYQCLIRYNTIRKLQKNLVWKPEEDEKLLKLIKIFQIGDFIPWGEVASWMENRTKQQMYFRWTYSLAPYLIKGRFSKSEDNILKDAVAKYGTNFRKISAALIPNRSTVQLHDRYQTLTHSQLANWNVWSLEEDLKLMELYERFGPNWSRIAEMFTCKTRTKLRHRYAALQKYISKGVSINDLHTDKNSEVQQETGINCVNKGMANKDCSEDIDKELIKYFHVEEKIKKSFGHRDQPYMSDELVCDVNKLYNILRQLNAQLSIPDDAINNPMLNGRQRQLLFSLKEYMDMKDNKDRQRMVLDEYSSLMFGVNRSYVAEIPSTTNYIDCRVNTQSTLLDENAIDFDTPDVVVSHIGGNEQELEFEKLVCLLVQSRSSEDRRLVRTTKGILDRNHSATNSRDNNNRSSLNCNVVSTRNMSNVHPKDSRNDGNVLLVQTNVRGRINRSTSCSQSENTTSNLNTLFNAFETTREFPATVEIPKDPYIPAIESTHSTLFSFKRLLGLKQRFNKEQNIPPKALTMSKTCQRSLSLLETRLEQLFKYPIGLSRNSLPEVYIIDTFSYDDITSQRKASDPPTIPKPRKTRKLQKFDKTRNGNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00864563;
- 90% Identity
- iTF_00860312;
- 80% Identity
- -