Lcal024298.1
Basic Information
- Insect
- Lasioglossum calceatum
- Gene Symbol
- Mblk-1_1
- Assembly
- GCA_963966675.1
- Location
- OZ016556.1:3996983-4010472[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.6e-18 1.3e-14 54.2 0.1 1 45 564 609 564 609 0.96 2 2 2.6e-18 4.1e-15 55.8 0.0 1 43 1019 1062 1019 1064 0.94
Sequence Information
- Coding Sequence
- ATGGGCCGTAGGAGATGGAAGCAATATCAGGACACTCTGTACAGCGGTACTCGCAGCAGCGAATCAGTGACGGCACAGCCCCACCACCGGCTCTACCCGGCATTTTCGTCGTCCTGCGACCCGGTGCCCGGCAACTTGGAACAAATTGGGCCGCGCACGCTTCATCCCGCGTCCACCTCGCTACCCACAACGATAACGACAACGACGAGCACGGTGTCGGCGGCTACAACCACCACcaccagcaacaacaacaacaacaacaacagcaacagcaacgcgGCGGTAACAACGGCGACGACGGCGTCGACGACAGGCTTGGTCAAGCAGGAAAGCCTGCAGAGGCACCCCCTGCAAAACCATCACCACCACCAGGACCACCACCGTCATTATCACCAGTCGGAGGACCAGCGTCGTTTGAGGCCGGACGAGGTCAAGGTAGAGCTCGGGGAGGACGAGTTCCCGAACGGAGTCGCTCGCGAGGAATCGGTAACCAAGGGAACGGAGACATCGACGCCGATTACGGTTACGacggcaacgacgacgacggcaacgacgacgacgacgacgacagcaacgacgacgacggcggcgaCCACGGGAACGACCAGCATCGCCACCATCACCACAATCAGCACCGCGACCGGCACGATACCGACGATCGCGTCGACGAACGCGACGGCAACAATGACCACCGGAACCACCACGATTCCCACCAGGCGAAGAAGCAAACGCCAAAAGAACGACGGAGACGGTGCCACCGACGACAGAGAGGACGACGAAGAaaacgaggacgaggaggacgCAAGGTGTCAGAACGAAGCGGAGAAGAGGCTCAAGCTCGATCAGGATGCCGACAGGCCCGTCAGTCCTCTCAGAAGGGAAAAGGATCGAGCTGCGAGGGACTATCCGACTGCCAACACCACCGACACGGAAGGGACCAAGGAACGAACGGAGGAAGTCGCGTTGGTGCGGACACCGGTGACGCAGGGCTTGTTGAGAgtgaagaaggaggaggagttACAAGAAGCACCGAGTTCTGGAGGCGGCCCAACGATATTAACGACACCGGCTCCGGATTCGGATGGGACCAGGTCAGGGTTGTCGTGTCGGGAGGTTGACACGGCGGCTAGGAACACGGTAGCGCCGTATCTGATCGGAGGCAGGCGCACCAGCCCACCACCCGAAGACTGGAAGCCGAACGACAAGTGTTACTTTTGCCTGGACGGCAAGCTGCCGCACGATGACCAACCGCCCCTCAGCCCGCAGAGCGACAGCAGCAGCAGCTCGCGATCGGCCGAGTCACCGATGTCGGTCCAGGTGGACCCGATGGCGGCTTCAGTGGTCGCGGCCCTTAGCGGCACCTACCCCACCTTGCTGCCCCAATGGTGTCTACCACCTAGGGAAGCGCCTCTGGTCGGGGTGCAAGCTCACCAGGACAGCGCGACGCCAGTCGATCAGCCGCTCGACCTCTCGGCCAAACCCAAAAATTCTCAGGACAACAACATATCCCTTTTGGAGCAACAGAAAATACCTCTAAGGATGCCGGCAGGTATCGACCCCAAGAGTATCTTTAATTCGTGTTACCGCGCGAAACCGCGGGTCGGGCCGGTGGCTGTGACGGCGGCACAAGCTGCGGCAGGCGTCGGTGGTGTCCCCGTGGTGGGTGCCGGGGGTGGCCGGAGGGCCTACACCGAGGAGGAGCTGCAGGCCGCCCTCAGGGACATCCAGAGCGGAAAGCTCGGCACGAGAAGGGCGGCGGTCATCTACGGAATACCGCGTAGCACCCTGCGCAACAAGGTCTACAAGCTTGCGATGGAGCGCGAAAGGGACGCGTCCCTGACTAGCACCCACTCACACCCTCACGAGCCCGGCGCCccagccaccaccaccaccaccatcaccaccaccaccacaactactactactactacaacAACACCACCAAATACGACCCAAAACGCCTCCGCGACCACTCCGCCCCCGCAAGTGGACGAGTTTAACACACGGCCGGTCGGTCTTGGCGAGGTTGCAAGACTCGAGGTGGACGACAAGGAACTGTCCGGGGCGGAAGAGGAGAAAGAAGTCGAGAAGGCGCTGCTGAAGCCGTTGTTGTCTTTCGAAGATCTTGTCAGGTTCTCCGCCCTCGAAGGTGGCGGCGGGGACTCTCTGAGGAGTTTGCTGCAACGGGGACAGGAAACGGGAACGGAGTGGCCAGGCCTGGAACACGCGAACATCGGTCCGTACATTCAGAAGATGCTCGCGGCGGCTGCACCGTTCAAAGGCATGGAGACGCAGGACTACCGTATCCCGGAGGTGATGAGGCGGCTGATGAGCGAGGACAAGAGGCTAAACAAGAGCGTAAACGGGGACCAGTCGCAGCCGTGTCACCAGCAGTTTCATCACCAGCAGCAGTCGCACGCGCAGCACTCGTCGCACTCGCAGGCCTCAGGCGGTACGGCGTCGCAgacgcaacaacaacaacagcaacagcaacgggGCCCGATCACGAACGACGACTTCAACCCGAACATCGAGGAGGAGGCGAGCGACAGCGCCCAGGGCCGAGCGATTCTAAAGATTCCGTCCTACAAGCCCGCGAACACGCCGGGCTGCTCGAGCAAGAACGGCGAACCGACCTCCGCGGCGTTCGCGCAGGGATTCGCCACCGCTGCCTCCAGCCCGGGCCTCCTCGAGAGAGCGAGCCCGGCGTTCTCCGGCACCAGCAGCCCGACCAACTCGCTCGTGGGGAAGACGGTGGCCGTCAACTTCCGCGATGTGATCGCCAAGAGCATCAGCGTTAAGTTCCAGGAGACCCAGCAGGTGCCGGCGGCCGCCGGACTCACCGGCTGCCAGTCGAGCGGCGTCGTACAGTCCCAGCAGACGATCATGACGGACCCGAGTCCGTTCAAACGGGGCCGGTACACACCGCCGCAGCCCCCCACGCAACAGTCCCAGTCGCAACCCAAGCCCCAGCAGTCCCAGGACGCGAACAAACCGAAACCAGCCACCGGCGGCAAGGGAACCAGACCGAAGCGCGGCAAGTACCGAAACTACGACAGGGACAGCCTGGTCGAGGCCGTCAGGGCCGTGCAGCGCGGCGAAATGAGCGTGCATCGCGCGGGCAGCTACTACGGAGTGCCACACTCCACCCTCGAGTACAAAGTCAAGGAACGACACCTCATGAGGCCAAGGAAGAGGGACCAGAAGCAGACGGACGATAAGACGAAGGAGACGGCGGTGGCGACGGGAGCGGCCGCGAACATGCGGCCCGGCACCGCGGACAAGAAGCCGCAACTGAAACCGCAGAAGCCGTTCACGCCGCCGGCGGGTATCGCGGGACCGAACGGGCTGAAGATGCCGCCGTTCATGGAGGGCATGCCTCACTTGCCGTTCGGGCCGTTCAACTTTTGGAACCCGACGCCGTTCATGCCGTCGCCGTTCATGGCCGGGGCGCCGAACGTGCCGACGATCCTGCCGGAGCAGTACTTCGCGACGAGCAGGATGCGTGGGCTGCAGGAACAACAGAGGAGCGCGGCGATGgtgcaacagcagcaacaacaacaacaacaacagcagcaacagcatcCACAGAGGGATAGGGATGGTATCGGCGCGTCGACAGCGACCACGGAGTCGTCGCCGGGAACCTCGAACTCCCGGGGCACGCCGATGTCGAAGGCGGCTCGCGAAGCCACCGAGGGTTTGTACGACGGCTCGGCAGCGAACGGCAGTTTCCTGGACAGCCTGATCAGGTCTAGCCTGGAGACGGGAATCCCAAGGGACCAGAGGGCGATCACCGAGACGAGGGGCAGTCAGCCTGCGTCGTCCTCGCAGCAACAGCTCCCGGAGACGATGAGGAGTAAAGCGTTGATCGACCAGTTGTGCCGAAACTCTAGGAGAACGCCGGTGCCTCGGCTGGCCCAGGACAGCAGCGAGGACGAGAGCTACAGGGGACCATCGACGGCGGGAAGACCAGTCCCGGAGAGGCCGGAACGCGTGCCCACCGTCGACCTGAGCCCGTCACCGTCGGACAGGTGTCGCGTTGACGACGCCAGCGACCGGCTCGCCTCACCGCCAACGCCTCTCTCGGTCTCAAGGGCCGGGAGTAGGGACGAGGACAGTGCTCGCGACTCGAGGGCCGATCGCAGCAGCAGGGAGCGCGAGGTCCACAACGGCGGACAGGAGGATCGCGATCGAAAGCCTCTGACGAGCGGCGGCGGCCAGCAACAGCAGTCGTCGTTGTCAACGTCGCAGCAATCGTCGCAACAGCAGCCGTCGTCGCAGTCGCAGCTGAATCACTACCCGGACTTGCTCTACGCCGTATCAACTGACAAAAAAAGTGCCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGAAGActcagcaacaacaacagcagcaacaacaacagcagcaacaacctGCGCAACCGAAAGAGTTTGCTGCGGTGAGCGGACTGGTTGTGCAACTGCAGCGGGGCTACAACTCCGGGAGCAACAGATCCGGCGAGCAGACCAACAACCAGCAGTCGGCCGAGCAACGCGGCCCCGTCATCGGTATGGAAGACACCGTCGAGCAGTAG
- Protein Sequence
- MGRRRWKQYQDTLYSGTRSSESVTAQPHHRLYPAFSSSCDPVPGNLEQIGPRTLHPASTSLPTTITTTTSTVSAATTTTTSNNNNNNNSNSNAAVTTATTASTTGLVKQESLQRHPLQNHHHHQDHHRHYHQSEDQRRLRPDEVKVELGEDEFPNGVAREESVTKGTETSTPITVTTATTTTATTTTTTTATTTTAATTGTTSIATITTISTATGTIPTIASTNATATMTTGTTTIPTRRRSKRQKNDGDGATDDREDDEENEDEEDARCQNEAEKRLKLDQDADRPVSPLRREKDRAARDYPTANTTDTEGTKERTEEVALVRTPVTQGLLRVKKEEELQEAPSSGGGPTILTTPAPDSDGTRSGLSCREVDTAARNTVAPYLIGGRRTSPPPEDWKPNDKCYFCLDGKLPHDDQPPLSPQSDSSSSSRSAESPMSVQVDPMAASVVAALSGTYPTLLPQWCLPPREAPLVGVQAHQDSATPVDQPLDLSAKPKNSQDNNISLLEQQKIPLRMPAGIDPKSIFNSCYRAKPRVGPVAVTAAQAAAGVGGVPVVGAGGGRRAYTEEELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLAMERERDASLTSTHSHPHEPGAPATTTTTITTTTTTTTTTTTTPPNTTQNASATTPPPQVDEFNTRPVGLGEVARLEVDDKELSGAEEEKEVEKALLKPLLSFEDLVRFSALEGGGGDSLRSLLQRGQETGTEWPGLEHANIGPYIQKMLAAAAPFKGMETQDYRIPEVMRRLMSEDKRLNKSVNGDQSQPCHQQFHHQQQSHAQHSSHSQASGGTASQTQQQQQQQQRGPITNDDFNPNIEEEASDSAQGRAILKIPSYKPANTPGCSSKNGEPTSAAFAQGFATAASSPGLLERASPAFSGTSSPTNSLVGKTVAVNFRDVIAKSISVKFQETQQVPAAAGLTGCQSSGVVQSQQTIMTDPSPFKRGRYTPPQPPTQQSQSQPKPQQSQDANKPKPATGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQTDDKTKETAVATGAAANMRPGTADKKPQLKPQKPFTPPAGIAGPNGLKMPPFMEGMPHLPFGPFNFWNPTPFMPSPFMAGAPNVPTILPEQYFATSRMRGLQEQQRSAAMVQQQQQQQQQQQQQHPQRDRDGIGASTATTESSPGTSNSRGTPMSKAAREATEGLYDGSAANGSFLDSLIRSSLETGIPRDQRAITETRGSQPASSSQQQLPETMRSKALIDQLCRNSRRTPVPRLAQDSSEDESYRGPSTAGRPVPERPERVPTVDLSPSPSDRCRVDDASDRLASPPTPLSVSRAGSRDEDSARDSRADRSSREREVHNGGQEDRDRKPLTSGGGQQQQSSLSTSQQSSQQQPSSQSQLNHYPDLLYAVSTDKKSACDSKLIVDHSSQKTQQQQQQQQQQQQQPAQPKEFAAVSGLVVQLQRGYNSGSNRSGEQTNNQQSAEQRGPVIGMEDTVEQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00865231;
- 90% Identity
- iTF_00762467;
- 80% Identity
- -