Basic Information

Gene Symbol
Arid4b
Assembly
GCA_963966675.1
Location
OZ016546.1:17259510-17266566[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.5e-28 2.6e-24 86.0 0.1 1 89 324 411 324 411 0.95
2 2 1.4 4.2e+03 -1.2 0.1 28 63 1354 1389 1337 1403 0.68

Sequence Information

Coding Sequence
ATGTCTCAGAAATCGGCAGGCTGTCATGAACGTAGCGGACTCCGTTTCGAAAACGTGGGAGACGATCCGCCGTACCTATCAGTAGGTACGGAGGTTAGTGCTAAGTACAAGGGTGCCTTCTGCGAAGCAAAGATAAGAAAAGTAGTGCGATCGGTTAAATGCAGAGTATCTTATAAACAAGGTTTGGGTACTGCGACTGTAGCTGACGACCAGATAAAAGGAACTTTAAGAGTAGGTGCATCCGTTGAAGCTAGACATGCTGATAAGAAAGAATTTGTGGAAGCAACGATCACCAAAATCCAAGATTGCAGTCAATATACTGTAGTTTTCGACGATGGAGATATTACAACGTTAAGAAGAACTGCGCTATGTTTGAAGAGTGGACGGCATTTTGCAGAGAGTGAAACCTTGGACCAACTCCCTTTAACGCATCCAGAACATTTTGGGAATCCAGTAATTGGGGGTAGAAGGGGACGACGGTCTAGACAAGCGCAAGATGAAAGTAGCGATGATGAAGATAGTCCTCCACGAGGAACTCGTGACTCGGGTTCTAGCGGTACAGGGAAAGAAGGTATGGAGACAGAACCAGAGATTGGACGAGTCGTATGTGTGGAACTTggagataaaaagaaaaaggataACTGGTTCCCTGGGTTAGTGGTTGCACCAACTGCACAAGACACAGTGAGGATTCGAGTGAGAGATGACTATCTTGTTAGATCATTCAAAGATGCACGATATTATACAGTTCCGAAGAAAGAAGCCACTGAATTCACAAAAGAACTTGTCAACAAAGTTGAGAATAGTACATTGAAGGTTGCGGTAGAAAAGGCACTGCTATTTTTAGAGAAGAATGAGTTACCTCCCCATTGGGATAGGGATTCTCTTTTTGGACATTCTGTATCGAGTGGAAATAGTGACTCTGATGGAGAGCTTGATTCGGATAGTTCAGATGATGAGCCGCGCGAAGAAAAAGATCACTTTGTGGCGCAACTATATAAATTTATGGATGATCGTGGAACACCTATCAATAATTGCCCAATGATCGGATCCGAAGACATAGACTTGTACAGGTTATTTCGAGCTGTTTATAAATTGGGTGGTTATAATCGCGTAACGAATCAAAACCAATGGAAACTGATAACGCGTCGTTTAAGCTTTACAATGCAAAATTCTCCGTCTACGCACAATTTGGTTAAGCAGGCCTACAAAAAATTCCTACATTCGTTTGAAGATTTTTACAGAAAATTAGGTTGTACAATGGTGAATCATCCAAGAGGCACTATACGCAAACAACGTCCCGGTAGAAGTCTGATTAGAGATAAAGACAGAAATACGCCTGTACCACCACAAGTGACGGTcgttaaaaatgaaaaagaggAGGAAGACAAGAAAGTGATAGAGGAtgagaaaaaggagaagaaagaaataaaaaaggagCCGGTGAAGGAGGAAGAggtgaaaataaagaagaaggaTGAGTTTGAGGAAAGTGGCAGTGGCCAGGAAAGCGATGTGAACGTGGAAGGTGAAGCAGAATCATCCAGCAGTGAAAAGTCTCAAAAAATTTCAACATCGTTGGCGTTACAAAACAGAGGTAAGTCTAAAACTAAAGAGGAGTCAAAGAAAAAGGTAATAGAGAAGAAGAAAAACGAGCCTAAAAAGCAAGAGAAAAAAGATGATAAAGCGAAGGAAGAGGATGCTACTAAAACGAGATCTAAATCCAAAGACGATACTGTTAAAAAAACCTCTTCTGAAACTAGGGAAACGAGGACTCCATCTCGAGAATCGGACAAGAAAACGCTGACCAAACAGAGGCGTTTAACCGACGAAGAATTGAAAAGACGAGGGAGAAAACGTAAAGAGTACGAGGCCGAGAAGTCACGTTCCGATGAACAATTAGCAGAATCTGCTCCTTGCTACAAGGGTCCTGTAGAATTAGGAGACAGATTAAAAGTATATTACGGACCCACTCATGAATCGAAAGTCACGTATGAAGCGAAGGTTATCGATATGGAGAGGGATGGCACAGAACCGATGTATCTGGTTCATTACACTGGATGGAACACAAGATACGACGAATGGATCAAGGCGTCGAGAATAGCGCAAAACTTTACGCAAGCTCAGGGTAGAGTTAAACGTGTTAAAGCTAGTTCACGACCACAAACTCCCAGTACGAatttatctaataatgtaaacaaatcGTCGAAAATTGTCTCGAATACAAGTTCAAACGCGTCCCAAAGTCGTCGTCGAGCACAAAGTGTAGCCCCAACAACGACGGTTAGCTCCTCGATTACAATGAAGGAAGTCAAGAAAGATGAGAAGGAGAAAGATAGGGAGACATCTCAGCCAGTTAGATCTACGACTCCACTGTCTGCTACAAGTTCCAGCTCCAGAACTAAGAGTCCAGCGACCCCAGCGACTAATCGTCAAACAAGAACGACAAGAAACAATGATGCGCCTGGTATAGAACACAGACGACGCACGAGAAGGACGTCTGGACATACAGACATATCAATCGCGTCGGAAACTGAAGACAGCGAGACGTGTGATTCTGATGCCACAGAACCTGAACAAACAAGGACCAAATCTAAAGGTGCCGACGACAGGAAACGCAGAGAGGCCAAATGTCGAGCCGAGGATAGAATAAAACCAGACGAGACTAGTGACGGTGAGGAAGATAAAGATAACTTGGAAGAGCCACGCAGAGGTAAACGTTTGAGGAGAACGATTGGTAAATTACAGGGTATCAAGTCGGAACCGGATAGCGATGAGGAACAGCCTAAAGGTCGAGATTTCGACTTGAATCAAATACGATCGGAACTGAAAGGTTTCGACAAGGCAGTGAAATTAGAGCTTGTTAGAGTTGAGCCTGATCCAGAGGATGAAATCAAAATAGAAGAAAAGGAAAATGCGGTTCTAGCTTCGCCGAAATTAGATAAAAATTTGGAACCTAAATTAGAAACTACTCCTGAGCCGAAAGCGACAGAGAGTACAGAAGACATATATGAATTCAAAGAACCAGAGCCGTTTGAATTTGAAGTACGTAACAAACGAGACACCAGTGGAGATAAAGATAAAGTAAAGAAGAGGGTATTCGAGGAAGAACCGAAAAGCCCGAAAAAGAAGCAGAAAATGATTGTATCGCCAATTATAAAAGAAACCAAGCCGGACATCGATGATTCAAGAAAGAAACCGAAAAAATTGTTTAGTAAACGGATCGATGAAATTACAGAGAATCAACCTACTCACAAACCGCCGCAGCCTGCGACATCATCGAGTACGTGTGAAGAAGCATTTGATAAACTTTGCGAATCACCAACGTTTAATCAAGTGAAAGCTGCACCTATCGTCGAAGAAACAGGTAAAATAACAAATGGTATAGATTTGTTATTCAGTGATTTACCTGGCGACGATGATGGTACTCACGATGATTCTGAGGATCGACTAATAATATCAGAGGCAGAGGTTTCAGAAGCAGAACAAGAGAACTTATTTACTTATCAGCAAGAAATATTTTCTACCAATGATATGATGAACGACTCGTTAGAATCGTCTAAAGAAGATACAAGTCCACAGGTTGAAACTATAAGAGAAGAATTACTATCGACAAGTTTGAACAAGCCTGAGGTGCCCCCGGAGCAAAAACCAACTATTAAGATGTCCCCATTACAACACAGACAATCTCCAGAATTAAAATCACTCGATACTAAATTATTAGATATTGCTCCTGTCTCGTCTCCGATTGTACCAGTTCCAGCACCGATTAGTGCAAGATTACCAGCCACGTCTACAATAGAGGAGAAGCTCTCAGCGGCGATGGCTTTCCGTAATAAAatcaaagaaattaaaaaagaagacgAGGTTCCCGAAGTCATATGGAAACCTTCAAAAGAAATTCCGAAAAAGCTGGATACTATAATTGTACAAAAGAATAAGGAAGAGCAAAGCGGGCCTAAGGTAGATATCGAAAGTAAAAAGCGCGAAGAAGAAGATATTCCGCCGAATAACGAAGAACCGTGTAGAGAGATAATGCGAGTAGTCATCAAACAGAAAGACGAGGAGCTTCAACAATTGAAGTTGAAGAAAGAGGTGGAAACAAAAACGGAACACAAAAAGGTACAAGAGCAAGGTACCAGTGAAATAGTATGGAAGCACGTTGAAACTGAAGAATCGAAAAAAGTGGAAGATGAATTTAAGGAACACGATTttaaggagaaagagaaagaaaagcgtaaaaagatAGTTACTCAAGACATGGATTCTGCAGACAGTAGTGACTCCGAGCAGAGGCTAGTAATAGATAACGAAGAACCTCAAGATGCAAAAACACCCTCGAACTTCGATGTAAAATTACGAGCGGAGTTAGATAGACTTCAAGATACACAGGAAAGGCATTCAAAATTACAAATACAAAAATCCACACAACAATTGAAACATCAACAACAAGAGTGTATTATAGAATGCAAACCGGAGAGCAGCATGTCTGTTACAATTATGAAAGCAGATGAAGAGGGTGAGGCAATTAGTTCTTTACTATGCGAAGAAGAAATACCAGGTTCACCTGCACCTGTATCTGAAAACATCGAACAAATAAATGCTGGTCCGTCGTGTTCTCCACCAAAAGTCGAAACATCTGAAACCAGTATAGTACTTATGGAAATGCCTTTCGCGAGTGCTCCTACGTCAGGTCAAAGTACAACCAGCAGTACCGTTGTCACTTTGACAATGGCACTACCAAAAACGGTCGAAACATCTGTTCCAGTTTCTTTACCAATGCAACCAAATCCTGCTCTAGGTGTGAGACAGCAATCGCATCATCAACATTTACCTGCACTAATGCCTGCCCAAAGACGGGAAAGCAATGAAGCAGCACCTGTAATGGACAATACTCCACCGACTACACCAGACTCTAGTATTTCCAATATCTCTGGTTCTCCAAGGGAAGAAAGAACAGGTGGTTCATCGCCAACGTCGGAAGATAACTTGAAACTACATCGTGATAGTTCTGAAGCAGACAACGATAGCGGTGGTAAAGGTCCTGCATTCAGTGAAGACGATACGCTACCAAATGCCGAAGGTAATTCCACCGATAGAATATTGAAGCCACCTGCAAAACGTTCTGTGGAGGAATCTCAGTCCCCTAAGAAGCGTAAGAGGAGTCGAAAACATTCAGAATGTGATAAGAACACCTCGAAAAAAAGTGCAAGGCATAGTGGCAGGCATGGTAGACACGGAGCTGGAAGTGACAGCGACGATACAAGCGAAGGCTCCAATCTGTGTGGAGCTAACTCAACGTCAACTAACAACAATCATACGAATATGACCACCACCGTGACCGATCTTAGTAACTATTCATCGAGATCACCTCGACCgacaaaatacaatttctatgtGGAATTAGATCCCGAATTGGATGGGAGTCAAAGGATAGCTGTATTACAACAAAAATTAGCCGAATTGCGTAAAACATATAATGCTGTGAAGGTTGAATTGGCTGCTATAGAAAGACGCAGAAAAAAATTGAGGAGAAGAGAACGGGAagCCATAAAGGCAGCTAAAGCAGAAATGCAACAAGCCTGTTCGTGA
Protein Sequence
MSQKSAGCHERSGLRFENVGDDPPYLSVGTEVSAKYKGAFCEAKIRKVVRSVKCRVSYKQGLGTATVADDQIKGTLRVGASVEARHADKKEFVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFGNPVIGGRRGRRSRQAQDESSDDEDSPPRGTRDSGSSGTGKEGMETEPEIGRVVCVELGDKKKKDNWFPGLVVAPTAQDTVRIRVRDDYLVRSFKDARYYTVPKKEATEFTKELVNKVENSTLKVAVEKALLFLEKNELPPHWDRDSLFGHSVSSGNSDSDGELDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINNCPMIGSEDIDLYRLFRAVYKLGGYNRVTNQNQWKLITRRLSFTMQNSPSTHNLVKQAYKKFLHSFEDFYRKLGCTMVNHPRGTIRKQRPGRSLIRDKDRNTPVPPQVTVVKNEKEEEDKKVIEDEKKEKKEIKKEPVKEEEVKIKKKDEFEESGSGQESDVNVEGEAESSSSEKSQKISTSLALQNRGKSKTKEESKKKVIEKKKNEPKKQEKKDDKAKEEDATKTRSKSKDDTVKKTSSETRETRTPSRESDKKTLTKQRRLTDEELKRRGRKRKEYEAEKSRSDEQLAESAPCYKGPVELGDRLKVYYGPTHESKVTYEAKVIDMERDGTEPMYLVHYTGWNTRYDEWIKASRIAQNFTQAQGRVKRVKASSRPQTPSTNLSNNVNKSSKIVSNTSSNASQSRRRAQSVAPTTTVSSSITMKEVKKDEKEKDRETSQPVRSTTPLSATSSSSRTKSPATPATNRQTRTTRNNDAPGIEHRRRTRRTSGHTDISIASETEDSETCDSDATEPEQTRTKSKGADDRKRREAKCRAEDRIKPDETSDGEEDKDNLEEPRRGKRLRRTIGKLQGIKSEPDSDEEQPKGRDFDLNQIRSELKGFDKAVKLELVRVEPDPEDEIKIEEKENAVLASPKLDKNLEPKLETTPEPKATESTEDIYEFKEPEPFEFEVRNKRDTSGDKDKVKKRVFEEEPKSPKKKQKMIVSPIIKETKPDIDDSRKKPKKLFSKRIDEITENQPTHKPPQPATSSSTCEEAFDKLCESPTFNQVKAAPIVEETGKITNGIDLLFSDLPGDDDGTHDDSEDRLIISEAEVSEAEQENLFTYQQEIFSTNDMMNDSLESSKEDTSPQVETIREELLSTSLNKPEVPPEQKPTIKMSPLQHRQSPELKSLDTKLLDIAPVSSPIVPVPAPISARLPATSTIEEKLSAAMAFRNKIKEIKKEDEVPEVIWKPSKEIPKKLDTIIVQKNKEEQSGPKVDIESKKREEEDIPPNNEEPCREIMRVVIKQKDEELQQLKLKKEVETKTEHKKVQEQGTSEIVWKHVETEESKKVEDEFKEHDFKEKEKEKRKKIVTQDMDSADSSDSEQRLVIDNEEPQDAKTPSNFDVKLRAELDRLQDTQERHSKLQIQKSTQQLKHQQQECIIECKPESSMSVTIMKADEEGEAISSLLCEEEIPGSPAPVSENIEQINAGPSCSPPKVETSETSIVLMEMPFASAPTSGQSTTSSTVVTLTMALPKTVETSVPVSLPMQPNPALGVRQQSHHQHLPALMPAQRRESNEAAPVMDNTPPTTPDSSISNISGSPREERTGGSSPTSEDNLKLHRDSSEADNDSGGKGPAFSEDDTLPNAEGNSTDRILKPPAKRSVEESQSPKKRKRSRKHSECDKNTSKKSARHSGRHGRHGAGSDSDDTSEGSNLCGANSTSTNNNHTNMTTTVTDLSNYSSRSPRPTKYNFYVELDPELDGSQRIAVLQQKLAELRKTYNAVKVELAAIERRRKKLRRREREAIKAAKAEMQQACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00863745;
90% Identity
iTF_00965838;
80% Identity
-