Lcal020001.1
Basic Information
- Insect
- Lasioglossum calceatum
- Gene Symbol
- -
- Assembly
- GCA_963966675.1
- Location
- OZ016550.1:14351922-14352665[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.09 85 3.9 0.1 16 44 105 133 102 136 0.86 2 2 4.6e-07 0.00044 20.8 0.8 36 64 168 196 166 197 0.93
Sequence Information
- Coding Sequence
- ATGTCGACTATCGCGGCCGGGACAAATCCCGGTGGCGGTGGCCGGCCCGACGCGCCGGGCCCCCTCCTCGCGGGGGTGGGAGGTCTCCACGGCCCGGTGGACGACCGGATGTCCCTGGCGTCGAATAAGACTCCGGGGAGCAAGAGGACATGGACGCCATCCGTGGGGGAGTCTGTCCCCCCCGGGGAGAACAAGAGGCCCCGCGACGAGGGCGCACCCTCTGTTGAGGAGTGCCAGCTCGAACTGCGGGACCTCCTCCCCGGGGAGATCGCCGCCGAGGTGGTTGCCGCCAGCCGTGCGGTCGAGGCCACCGCCCTCAGGAGCCGCAATATGAAGGGGACGTATGTGCGGGCCCTGCAGGGCGCGGCGCACCGGGTTGAGGCTGCGATGAGGGAGCTGGAGGGGAGGGGGTGGCAGggagcctcctcctcctcctccgctggtCCCGGCGTCGCGCCCCCTGGGGGGTCAGCCGGTGAGCTGCCTGCAGCCCTCTGGAAGAGGGTGCAGGCGGAAAACCGTACCCTCAGGGAGGAGAACGCGTCGCTGAAACGCGAGATGGAGGAGTTGAGGGACTCCCTGACCGCCATCCGTggggagatgatggcgatgaagaggcAGCAGGCCGCCCCGGTGCCTGTCCCCTCTTCGtcgccgcctctcgccgcggatGCGGTCCCCTCGAGGCGTTCGCCGCCCCCTCCTCTCCTGGGAGTGGCGCCTTCGGGGGTGCGGTCCTTCTGA
- Protein Sequence
- MSTIAAGTNPGGGGRPDAPGPLLAGVGGLHGPVDDRMSLASNKTPGSKRTWTPSVGESVPPGENKRPRDEGAPSVEECQLELRDLLPGEIAAEVVAASRAVEATALRSRNMKGTYVRALQGAAHRVEAAMRELEGRGWQGASSSSSAGPGVAPPGGSAGELPAALWKRVQAENRTLREENASLKREMEELRDSLTAIRGEMMAMKRQQAAPVPVPSSSPPLAADAVPSRRSPPPPLLGVAPSGVRSF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00860892;
- 90% Identity
- iTF_00860892;
- 80% Identity
- -