Basic Information

Insect: Lasioglossum albipes
Gene Symbol: -
Assembly: GCA_000346575.1
Location: KB641039.1:1327995-1334396[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.031 2.5 8.9 0.3 3 20 25 42 23 44 0.92

2 18 0.069 5.5 7.8 3.0 1 23 86 109 86 109 0.94

3 18 1.2e-05 0.00098 19.6 0.3 3 23 117 137 116 137 0.98

4 18 6e-05 0.0048 17.4 3.4 2 23 144 165 143 165 0.96

5 18 1.5e-06 0.00012 22.5 1.2 1 23 171 193 171 193 0.98

6 18 0.014 1.1 10.0 3.2 1 23 240 262 240 262 0.96

7 18 1.1e-06 8.7e-05 22.9 1.9 1 23 695 717 695 717 0.98

8 18 0.0023 0.18 12.4 2.1 1 23 724 747 724 747 0.96

9 18 0.0007 0.056 14.1 0.4 1 23 755 778 755 778 0.96

10 18 7e-05 0.0056 17.2 5.4 1 23 784 806 784 806 0.97

11 18 0.00048 0.039 14.6 1.3 1 21 812 832 812 833 0.95

12 18 1.5e-06 0.00012 22.5 1.2 1 23 836 858 836 858 0.98

13 18 0.014 1.1 10.0 3.2 1 23 905 927 905 927 0.96

14 18 1.1e-06 8.7e-05 22.9 1.9 1 23 1360 1382 1360 1382 0.98

15 18 0.0023 0.18 12.4 2.1 1 23 1389 1412 1389 1412 0.96

16 18 0.0007 0.056 14.1 0.4 1 23 1420 1443 1420 1443 0.96

17 18 7e-05 0.0056 17.2 5.4 1 23 1449 1471 1449 1471 0.97

18 18 0.00029 0.024 15.3 4.2 1 23 1477 1499 1477 1499 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.031	2.5	8.9	0.3	3	20	25	42	23	44	0.92
2	18	0.069	5.5	7.8	3.0	1	23	86	109	86	109	0.94
3	18	1.2e-05	0.00098	19.6	0.3	3	23	117	137	116	137	0.98
4	18	6e-05	0.0048	17.4	3.4	2	23	144	165	143	165	0.96
5	18	1.5e-06	0.00012	22.5	1.2	1	23	171	193	171	193	0.98
6	18	0.014	1.1	10.0	3.2	1	23	240	262	240	262	0.96
7	18	1.1e-06	8.7e-05	22.9	1.9	1	23	695	717	695	717	0.98
8	18	0.0023	0.18	12.4	2.1	1	23	724	747	724	747	0.96
9	18	0.0007	0.056	14.1	0.4	1	23	755	778	755	778	0.96
10	18	7e-05	0.0056	17.2	5.4	1	23	784	806	784	806	0.97
11	18	0.00048	0.039	14.6	1.3	1	21	812	832	812	833	0.95
12	18	1.5e-06	0.00012	22.5	1.2	1	23	836	858	836	858	0.98
13	18	0.014	1.1	10.0	3.2	1	23	905	927	905	927	0.96
14	18	1.1e-06	8.7e-05	22.9	1.9	1	23	1360	1382	1360	1382	0.98
15	18	0.0023	0.18	12.4	2.1	1	23	1389	1412	1389	1412	0.96
16	18	0.0007	0.056	14.1	0.4	1	23	1420	1443	1420	1443	0.96
17	18	7e-05	0.0056	17.2	5.4	1	23	1449	1471	1449	1471	0.97
18	18	0.00029	0.024	15.3	4.2	1	23	1477	1499	1477	1499	0.98

Sequence Information

Coding Sequence: ATGTCAATCGGTATTAATTTACAAGAAAGTTACAGGAATGATGTAACTGAAATGCAATTCACAAATCTCGCCTGTCCAATCTGTGACTTCTTGTTTACAAATAAGGAAGAATTCTATGATCATCTGCATAATTATACTGGAGATGGATTGTTGAAACAATTTTTAAAGATTGACATAAACAGCGAATCTCAGACGGAAGTAAAACATTGCGACCAAGAACAATCTGATAAATTGCATGAGAACATAGCAAGGCCTTTCAAGTGTCAACAATGCGACTTAACATTCGACCGAGCTTCTCAACACGATTACCATTACCGAAGTATACATTTAGGTGAGAAATCACAGCTTTGCGAAATCTGTGGCAAAGGTTTCTTCAGGAAAGCTGACCTACGAACGCACTTAAATATTCATTTGGGAACCAACACTTGCATTTGCGAAGTTTGCGGGAGAAAGTTTAACCACATATCCAATCTGATCAGGCATAGTAGAATGCATGCTGGGATAAAACCGTACCCATGCTCGATTTGTAGCAAACGCTTCACACAGATTAGCTCTCTTGCCAGACACAAGCGTACTCACGTGAAACCGAAGAAGGATGTGCACGAGGCGCAAAGTAATAGCGCTAATACCACTGCTGAGAAGAAAGATCACACGCTAAGCAAGAATAAGTCTGTTGAAGGTAACGCACTTGCTCAACAAAAGATTCTTAAAAGACAACACTATTGTAAGACCTGCGGTGAGAGTTTCAGTTTAGTTTTACATTTGCGGGAACACGAGAGCACTCATTCAAAGAATACAACCAGTTCAGAGTGCAAGAATAACGAAATGAAGAATTCAGTGCTCGAGGAGAATTTTGATTTCTTCGAGAACGAGGAAAATATGAAAAGAGTATTGCCATTGGAAACGATCATTTATATCACGTCAGAACAGTTGAAGAAAATTAATTTGGAAAACTTCGAGAACAGTAAGGATCACATTGCGCAAGAACATTTTTGCGATGATATCCACGAGAAAATTCCATTAACCGAGGAATTAGCTGATTCCGAGAAACTGATATCCAATAATGAAATACTTCAGAATGTACTGTATGTGTGCGAAATGGATGAACCTTCTCTGAAAAGCAAATTGAATACGAAATTCTCGAACAATCAGGAGTATTTATCATGTTCGCAAACGTATGAACTGGATTTACAGAAATCAGAAGTACCACAGAATTATAACGCTTCAGCAAACATTTCTCTGAATGTTACCGATATGTTCCAAAAGATAGATTTATCGGAATCGAGTATCGATGAACACGATAAGCTCGATTTGACTATTCAAAATCACCAAGAGATAAATGTGGAGGAAACCGCAAAGGTTGCTGAGGATATAAATGATGAAAATGCTACGAATCAAGAAGAATCGATGCTACGTTTAGTACAGACAGAAACAGGGGAACAATTCTATGAATTTTTAATTAATAATCTAGTAGAAAAACTACCGAACATACAGTCTGTGAAAACGTCCGAAAATAAAGAGGAGACTACAGATATTTCCGAGAATGTAGGAAACATGAACGAAGACGTCCATCCTGAACAAAATATAAGGGACGATATACCCAGTGATCTAAATTATACGCAATACGAACTACAAGGAGAAGAGAAAAATTTCGCTGCGAGTCAGATCTTATTGGATCCACAAAATGATTTTGATAAATACGTGGAAACGAATTTCGAAGTTTTTGAACGATTAAACTATGACGACAGTTCCGAAAGATTTCTGAAATTCGTGGAAAACGAGGGAGTTGAAAATCAAAGCTCGAAAATGTTAGAGTGCAAAGACAACGATCAGCTTCTACAATTTCAAAGTTTCAGTCAAATCGATTCCATCCAAGAGAATGAGAAGAGCAACATAATTAACAACAGTGAACAGACGCTTTTAACTTCTCTTAACGACGATATACAATGTGAAATTAATACAGATAATGACCAAATTATTAACGAAGGGGAGACACAGGTACAAATTGACGATACCATTAATAATGACAAACAAGAGGATCAACAAGAAGATTTGAAAAAGTCCAAAGTATATCTGTTAAAATTCCAGTGTACTGTATGCGAGAAATCATTCTCGACCAGTTACAACTATAAACAACATATAGGTACACATTTTGCAGATCAGCAAAAGTTTCATTGCAAAGAATGCAAAATGTCCTTCGCTTGGAAATCTACGTTAAACAAACATATCGCTAGTAACCACAGACCGGAAGGTCCTCAAAAGTTTGCATGCGACATGTGCCAAAAAATTTACAATACTTCTTCGCAAGTAAATGAGCACGTGAAACGAGATCACCTGAAACAGAGGAATCACGTGTGTTCTCATTGTGGTAAATCGTTTTTCAAAAAGTACGACTTGAAAATACACAATAGAATCCACACGGATGAAAGACCGTACGTTTGTCCTGCTTGTGGGAAAAGGTTCCATCATAGAAGTCATATTATTCGTCACGAACGGATAAAACCGTACCCATGCTCGATTTGTAGCAAACGCTTCACACAGATTAGCTCTCTTGCCAGACACAAGCGTACTCACGTGAAACCGAAGAAGGATGTGCACGAGGCGCAAAGTAATAGCGCTAATACCACTGCTGAGAAGAAAGATCACACGCTAAGCAAGAATAAGTCTGTTGAAGGTAACGCACTTGCTCAACAAAAGATTCTTAAAAGACAACACTATTGTAAGACCTGCGGTGAGAGTTTCAGTTTAGTTTTACATTTGCGGGAACACGAGAGCACTCATTCAAAGAATACAACCAGTTCAGAGTGCAAGAATAACGAAATGAAGAATTCAGTGCTCGAGGAGAATTTTGATTTCTTCGAGAACGAGGAAAATATGAAAAGAGTATTGCCATTGGAAACGATCATTTATATCACGTCAGAACAGTTGAAGAAAATTAATTTGGAAAACTTCGAGAACAGTAAGGATCACATTGCGCAAGAACATTTTTGCGATGATATCCACGAGAAAATTCCATTAACCGAGGAATTAGCTGATTCCGAGAAACTGATATCCAATAATGAAATACTTCAGAATGTACTGTATGTGTGCGAAATGGATGAACCTTCTCTGAAAAGCAAATTGAATACGAAATTCTCGAACAATCAGGAGTATTTATCATGTTCGCAAACGTATGAACTGGATTTACAGAAATCAGAAGTACCACAGAATTATAACGCTTCAGCAAACATTTCTCTGAATGTTACCGATATGTTCCAAAAGATAGATTTATCGGAATCGAGTATCGATGAACACGATAAGCTCGATTTGACTATTCAAAATCACCAAGAGATAAATGTGGAGGAAACCGCAAAGGTTGCTGAGGATATAAATGATGAAAATGCTACGAATCAAGAAGAATCGATGCTACGTTTAGTACAGACAGAAACAGGGGAACAATTCTATGAATTTTTAATTAATAATCTAGTAGAAAAACTACCGAACATACAGTCTGTGAAAACGTCCGAAAATAAAGAGGAGACTACAGATATTTCCGAGAATGTAGGAAACATGAACGAAGACGTCCATCCTGAACAAAATATAAGGGACGATATACCCAGTGATCTAAATTATACGCAATACGAACTACAAGGAGAAGAGAAAAATTTCGCTGCGAGTCAGATCTTATTGGATCCACAAAATGATTTTGATAAATACGTGGAAACGAATTTCGAAGTTTTTGAACGATTAAACTATGACGACAGTTCCGAAAGATTTCTGAAATTCGTGGAAAACGAGGGAGTTGAAAATCAAAGCTCGAAAATGTTAGAGTGCAAAGACAACGATCAGCTTCTACAATTTCAAAGTTTCAGTCAAATCGATTCCATCCAAGAGAATGAGAAGAGCAACATAATTAACAACAGTGAACAGACGCTTTTAACTTCTCTTAACGACGATATACAATGTGAAATTAATACAGATAATGACCAAATTATTAACGAAGGGGAGACACAGGTACAAATTGACGATACCATTAATAATGACAAACAAGAGGATCAACAAGAAGATTTGAAAAAGTCCAAAGTATATCTGTTAAAATTCCAGTGTACTGTATGCGAGAAATCATTCTCGACCAGTTACAACTATAAACAACATATAGGTACACATTTTGCAGATCAGCAAAAGTTTCATTGCAAAGAATGCAAAATGTCCTTCGCTTGGAAATCTACGTTAAACAAACATATCGCTAGTAACCACAGACCGGAAGGTCCTCAAAAGTTTGCATGCGACATGTGCCAAAAAATTTACAATACTTCTTCGCAAGTAAATGAGCACGTGAAACGAGATCACCTGAAACAGAGGAATCACGTGTGTTCTCATTGTGGTAAATCGTTTTTCAAAAAGTACGACTTGAAAATACACAATAGAATCCACACGGATGAAAGACCGTACGTTTGTCCTGCTTGTGGGAAAAGGTTCCATCATAGAAGTCATATTATTCGTCACGAACGTATACACTTCTAG
Protein Sequence: MSIGINLQESYRNDVTEMQFTNLACPICDFLFTNKEEFYDHLHNYTGDGLLKQFLKIDINSESQTEVKHCDQEQSDKLHENIARPFKCQQCDLTFDRASQHDYHYRSIHLGEKSQLCEICGKGFFRKADLRTHLNIHLGTNTCICEVCGRKFNHISNLIRHSRMHAGIKPYPCSICSKRFTQISSLARHKRTHVKPKKDVHEAQSNSANTTAEKKDHTLSKNKSVEGNALAQQKILKRQHYCKTCGESFSLVLHLREHESTHSKNTTSSECKNNEMKNSVLEENFDFFENEENMKRVLPLETIIYITSEQLKKINLENFENSKDHIAQEHFCDDIHEKIPLTEELADSEKLISNNEILQNVLYVCEMDEPSLKSKLNTKFSNNQEYLSCSQTYELDLQKSEVPQNYNASANISLNVTDMFQKIDLSESSIDEHDKLDLTIQNHQEINVEETAKVAEDINDENATNQEESMLRLVQTETGEQFYEFLINNLVEKLPNIQSVKTSENKEETTDISENVGNMNEDVHPEQNIRDDIPSDLNYTQYELQGEEKNFAASQILLDPQNDFDKYVETNFEVFERLNYDDSSERFLKFVENEGVENQSSKMLECKDNDQLLQFQSFSQIDSIQENEKSNIINNSEQTLLTSLNDDIQCEINTDNDQIINEGETQVQIDDTINNDKQEDQQEDLKKSKVYLLKFQCTVCEKSFSTSYNYKQHIGTHFADQQKFHCKECKMSFAWKSTLNKHIASNHRPEGPQKFACDMCQKIYNTSSQVNEHVKRDHLKQRNHVCSHCGKSFFKKYDLKIHNRIHTDERPYVCPACGKRFHHRSHIIRHERIKPYPCSICSKRFTQISSLARHKRTHVKPKKDVHEAQSNSANTTAEKKDHTLSKNKSVEGNALAQQKILKRQHYCKTCGESFSLVLHLREHESTHSKNTTSSECKNNEMKNSVLEENFDFFENEENMKRVLPLETIIYITSEQLKKINLENFENSKDHIAQEHFCDDIHEKIPLTEELADSEKLISNNEILQNVLYVCEMDEPSLKSKLNTKFSNNQEYLSCSQTYELDLQKSEVPQNYNASANISLNVTDMFQKIDLSESSIDEHDKLDLTIQNHQEINVEETAKVAEDINDENATNQEESMLRLVQTETGEQFYEFLINNLVEKLPNIQSVKTSENKEETTDISENVGNMNEDVHPEQNIRDDIPSDLNYTQYELQGEEKNFAASQILLDPQNDFDKYVETNFEVFERLNYDDSSERFLKFVENEGVENQSSKMLECKDNDQLLQFQSFSQIDSIQENEKSNIINNSEQTLLTSLNDDIQCEINTDNDQIINEGETQVQIDDTINNDKQEDQQEDLKKSKVYLLKFQCTVCEKSFSTSYNYKQHIGTHFADQQKFHCKECKMSFAWKSTLNKHIASNHRPEGPQKFACDMCQKIYNTSSQVNEHVKRDHLKQRNHVCSHCGKSFFKKYDLKIHNRIHTDERPYVCPACGKRFHHRSHIIRHERIHF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -