Basic Information

Insect: Lapara coniferarum
Gene Symbol: stc
Assembly: GCA_949316025.1
Location: OX438920.1:27891634-27905707[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 3.4e+04 -4.3 1.6 15 19 450 454 449 454 0.81

2 13 0.048 8.1e+02 1.1 1.4 2 10 482 490 482 490 0.92

3 13 3.6e-05 0.61 11.1 18.1 4 19 498 513 496 513 0.93

4 13 4.3e-06 0.073 14.0 11.3 1 18 549 566 549 567 0.92

5 13 0.0001 1.7 9.6 11.1 1 18 608 625 608 626 0.98

6 13 1.5e-05 0.25 12.3 12.6 1 19 667 689 667 689 0.87

7 13 2 3.4e+04 -5.3 2.2 6 10 719 723 719 723 0.94

8 13 0.0006 10 7.1 7.3 1 11 729 739 729 740 0.95

9 13 0.19 3.2e+03 -0.8 1.3 3 10 743 750 742 756 0.92

10 13 1.4e-06 0.024 15.5 13.9 3 19 758 774 746 774 0.88

11 13 0.012 2e+02 3.0 14.5 9 18 820 829 813 830 0.91

12 13 4.5e-07 0.0077 17.1 11.5 1 17 866 884 866 890 0.85

13 13 0.0001 1.7 9.6 6.0 1 13 896 907 896 908 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	3.4e+04	-4.3	1.6	15	19	450	454	449	454	0.81
2	13	0.048	8.1e+02	1.1	1.4	2	10	482	490	482	490	0.92
3	13	3.6e-05	0.61	11.1	18.1	4	19	498	513	496	513	0.93
4	13	4.3e-06	0.073	14.0	11.3	1	18	549	566	549	567	0.92
5	13	0.0001	1.7	9.6	11.1	1	18	608	625	608	626	0.98
6	13	1.5e-05	0.25	12.3	12.6	1	19	667	689	667	689	0.87
7	13	2	3.4e+04	-5.3	2.2	6	10	719	723	719	723	0.94
8	13	0.0006	10	7.1	7.3	1	11	729	739	729	740	0.95
9	13	0.19	3.2e+03	-0.8	1.3	3	10	743	750	742	756	0.92
10	13	1.4e-06	0.024	15.5	13.9	3	19	758	774	746	774	0.88
11	13	0.012	2e+02	3.0	14.5	9	18	820	829	813	830	0.91
12	13	4.5e-07	0.0077	17.1	11.5	1	17	866	884	866	890	0.85
13	13	0.0001	1.7	9.6	6.0	1	13	896	907	896	908	0.95

Sequence Information

Coding Sequence: ATGTCACAGTGGAATAGCACATACTCTTATAACGACCAATATCAAGCTGGTAACACATGGAACGGTGACATGAATGGCCAATATGTTAATCAACCATATTACCCCAATAGGCAAGACCCTGGTGGACAGTATGTTAGTTTCAATGATTTTTTATCGAGAATGCAGGCCAACAATACTGTGCCTAATAATGTGCAACACTTTCACAATGTTCCTTATGAAAACTACCCTCCAGGGCAGTACAACTATCAAACCATGCCCTCCTCATCCCAAGAGCCTCACCGAGAAAATTACAATTACAGCACAAATTCAACAGCAATGCCTAACAGTGCAGAATCTTACCATGGTCAAAGGCAGTATAATGTGAATCCTATATACGCAAATGACTTGATACTTAAATCCAACCTTACACCAACAGCTACTGAGTTTGTTCCAAAAAGTATGTTAAAAACACCATCAAACAATCAAAATGTGTCTGAGGCTCCCAGCTCCTGTAATGATGTCCATGAAACCGTAAATACTTCAAGCAATTCATCAGAAACTAACTGGAGAGAAAGACCACAAAGCTCCCATAAAAATGGTGACACAAACGTCAAAGAGCAGAGCACAAGTAGCAGGTCACAGAGAAACAATAGAAATTATGAAAGTGGCAGTAGGAACAGAGAGACAAATTATACTGAAAATAAAAGTAACGAATTATCTCATGAGAGCTACAGGCACAATGAGTCAAGGAGCAGGAAGAATGACTCGAGTAGCCGTTATCATGACAACCCTCGTAACTCTGAGCCAAGTAATCACAGTCAAGAGTCTAGTTATCAAAATTCTGATAATGATAGGTCACATAACTCAAATCGTAATGATAAAAGAGGGCaatctaaattaaataatagatCAAGAGTGAAAGATTCGGATGTACGCACATTCTATAATAGTTCAGTATCCAAGGATAGTCAAGATGTAAGGAACAGCAGGAATGAAGGCTCCAGTAGGCAAAAGAATTGGGCAGGATCCCAACGACTCAGGGGGGTAGACAGAAGTAACCCTGATGATGAACAATATGCAAATAGCTACGTTCATCAAAAAGATGATAAACTAGACAGGGTCAAATCAGAAAATGCTTCCAGTCCTATtagatttaaaagtaaaaatgcAGATCAAGcacAAAAGGAGATGACTCAACGTGAACGCCTGACAGAACAACTAGACAAAGGCACGTTAGAATGTTTAGTGTGCTGTGAGCGTGTGAAACAAATAGACCCTGTGTGGTCATGTGGAAATTGTTACCATGTACTGCATCTCAAGTGCATTAGGAAATGGGCGCAAAGCAGTACTGTGGAGGGCAAATGGCGTTGTCCTGCTTGCCAGAACCCAAACGAAGAGATCCCTTCGGACTACCGATGCATGTGCGGCGCGATGCGGTCGCCGGAGTACCAGCGCGGCTCAACTGGCGCGCACACTTGTGGCAAGGCGTGCAAGCGGCCACGCAGTTGCCCGCATCCTTGCACCCTGCTCTGCCACCCGGGGCCATGCCCGCCATGCCAAGCTACTGTAAACAAACAATGTGGTTGCGGCGCAGAAACCCGATCCATTCTGTGCAGCAGCAAGCTTCCGCAATTGTGCGGACGTGTCTGCCAACGCACTTTGGAATGCAATGTGCACGAGTGTGCAAAGGAGTGCCACGAAGGGCCTTGTGACACTTGTGCGGAGATGGTTACACAAGTGTGCTACTGTCCTGCGGCGCGCGCACGCTCGGTGCCGTGTACGGCGCAGTCGAGTGGGCGCGCGGCGTGGTCGTGCGGCGCGGAGTGCGCGCGCGTGCTGGCGTGCGGCGCGCACGTGTGTCGCGCGTCCTGCCACGCGCCGCCCTGCCGACCCTGCGCGCTGCTGCCCGACAGCGTGCTCACGTGCCCCTGCGGCAAGACCAAGATTCAGAGAGACAAGCGAAAATCTTGCACAGACCCTATTCCCTTGTGCGGGAACATCTGCGCTAAACCGTTGTCGTGTGGTCCAACCGGCGATAAACACTTCTGCAAGCTCAATTGTCATGAAGGTCCATGCCCTGTATGTCCTGATAAGACTCTTCTACAATGTCGGTGCGGCCACTCGAGCCGCGAGGTGCCTTGCGCTGATCTTCCTGAAATGTTGAACAATGTGCTGTGCCAGAAAAAATGCAACAAGAAACTATCGTGCGGTCGTCACAAGTGTCGCTCGGTATGCTGCGCGTCGTCGACGCACCGTTGCGGCGTGGTGTGCGGGCGGCTGCAGTCGTGCCAGCTGCACCGCTGCGAGGAGTTCTGCCACACGGGCCGGTGCGCGCCGTGTCCGCGGCTCAGCTTCGACGAGCTGCACTGCGAGTGCGGCGCGGAGGTGCTGCTGCCGCCGGTGCGCTGCGGTGCTCGCCCGCCGCCCTGCACGGCGCCCTGCCGCCGGCCCCGTCCGTGCCAACACCCGCCGCACCACTCCTGCCACTCCGGAGACTGTCCACCGTGTGTTGTGCTCACTACTAAACGCTGCCATGGTAATCATGAGGAACGAAAAACAATTCCTTGTTCTCAAGAAGAGTTCTCGTGCGGTCTGCCTTGCGGAAAGCCACTGCCTTGCGGCAAGCACAATTGTATCAAGACGTGCCACAAGGGGCTTTGTGATGCTGGAAAATGCACGCAGCCGTGCGCGGAGAAGCGTCCCGGGTGCGGCCACCCGTGCGCGGCGCCGTGCCACTCGGGCGCGGCGGAGGGCAGCGCGGCGGCGACGTGCCCCAGCGCTGCGCCCTGCCGCCGCCTCGTGCGCGCCACGTGCCAGTGCGGCCGCCGCAGCGCCGAGCGCGCCTGCTGCGACAACGCGCGCGACTACGACAGGATGGTGAGCGCACTAGCTGCCACTAAGATGCAAGACGGCGGTTCCGTCGACTTAGTCGATGTCCAACGGCCTACGAACGTGCTCAAAACCTTGGAGTGCGAGGAAGAGTGTCGCGCGGAGGCACGCGCACGCCGGCTGGCGCTGGCGCTGCAGTTGCGCAACCCCGACGTGTCGAGCAAGCTGGCGCCGCGGTACAGCGAGCACGTGCGCGCCACCGCCCAGCGCGAGCCCGCCTTCGCGCTGCACGTGCACGACAAGCTCACCGAGCTCGTGCAGCTCGCCAAGAAGTCAAAACAAAAGACACGTTCACACTCGTTCCCGTCGATGAACTGGCAGAAGCGTCAGTTCATCCACGAGATGTGCGAGCACTTCGGCTGCGAGAGTGTGGCGTACGACGCCGAGCCCAACCGCAACGTCGTGGCCACGGCGGACAGGGAGAAGTCGTGGCTGCCGGCGATGAGCGTGCTGGAGGTGCTGGCGCGCGAGGCGGGCAAGCGTCGCGTGCCGCCGCCCGTGCTGCGCGCctccgcgcccgcgcccgcctcCGCCTCCGCCGCTACcatcgccgccgccgccgccaacAAATCTAGTGGAAGTGGTTGGGCGACGCTGACTTCAACGAACGCATGGGCCGCCCGCAGCCAGCCCAAGCCGCAGCCACAACCCACATCGGACGCTAAAATCGACTACTTCGACAACCCGCCCGACAACTAG
Protein Sequence: MSQWNSTYSYNDQYQAGNTWNGDMNGQYVNQPYYPNRQDPGGQYVSFNDFLSRMQANNTVPNNVQHFHNVPYENYPPGQYNYQTMPSSSQEPHRENYNYSTNSTAMPNSAESYHGQRQYNVNPIYANDLILKSNLTPTATEFVPKSMLKTPSNNQNVSEAPSSCNDVHETVNTSSNSSETNWRERPQSSHKNGDTNVKEQSTSSRSQRNNRNYESGSRNRETNYTENKSNELSHESYRHNESRSRKNDSSSRYHDNPRNSEPSNHSQESSYQNSDNDRSHNSNRNDKRGQSKLNNRSRVKDSDVRTFYNSSVSKDSQDVRNSRNEGSSRQKNWAGSQRLRGVDRSNPDDEQYANSYVHQKDDKLDRVKSENASSPIRFKSKNADQAQKEMTQRERLTEQLDKGTLECLVCCERVKQIDPVWSCGNCYHVLHLKCIRKWAQSSTVEGKWRCPACQNPNEEIPSDYRCMCGAMRSPEYQRGSTGAHTCGKACKRPRSCPHPCTLLCHPGPCPPCQATVNKQCGCGAETRSILCSSKLPQLCGRVCQRTLECNVHECAKECHEGPCDTCAEMVTQVCYCPAARARSVPCTAQSSGRAAWSCGAECARVLACGAHVCRASCHAPPCRPCALLPDSVLTCPCGKTKIQRDKRKSCTDPIPLCGNICAKPLSCGPTGDKHFCKLNCHEGPCPVCPDKTLLQCRCGHSSREVPCADLPEMLNNVLCQKKCNKKLSCGRHKCRSVCCASSTHRCGVVCGRLQSCQLHRCEEFCHTGRCAPCPRLSFDELHCECGAEVLLPPVRCGARPPPCTAPCRRPRPCQHPPHHSCHSGDCPPCVVLTTKRCHGNHEERKTIPCSQEEFSCGLPCGKPLPCGKHNCIKTCHKGLCDAGKCTQPCAEKRPGCGHPCAAPCHSGAAEGSAAATCPSAAPCRRLVRATCQCGRRSAERACCDNARDYDRMVSALAATKMQDGGSVDLVDVQRPTNVLKTLECEEECRAEARARRLALALQLRNPDVSSKLAPRYSEHVRATAQREPAFALHVHDKLTELVQLAKKSKQKTRSHSFPSMNWQKRQFIHEMCEHFGCESVAYDAEPNRNVVATADREKSWLPAMSVLEVLAREAGKRRVPPPVLRASAPAPASASAATIAAAAANKSSGSGWATLTSTNAWAARSQPKPQPQPTSDAKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01359405;
90% Identity: iTF_01359405;
80% Identity: -