Basic Information

Insect: Lapara coniferarum
Gene Symbol: nfxl1
Assembly: GCA_949316025.1
Location: OX438926.1:35498787-35501243[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 2 3.4e+04 -7.8 5.6 15 19 134 138 133 138 0.81

2 18 0.01 1.8e+02 3.2 0.3 4 10 169 175 168 176 0.97

3 18 3.1e-07 0.0052 17.7 15.9 3 19 186 202 185 202 0.95

4 18 5.7e-08 0.00097 20.0 12.8 3 19 239 255 234 255 0.93

5 18 6.3e-10 1.1e-05 26.2 10.2 1 19 290 308 290 308 0.99

6 18 1.7e-06 0.028 15.3 18.9 3 19 345 361 337 361 0.88

7 18 0.2 3.4e+03 -0.9 0.8 1 5 370 374 370 379 0.79

8 18 2 3.4e+04 -5.3 2.2 5 10 384 389 384 389 0.88

9 18 4.1e-07 0.0069 17.3 17.0 1 18 395 412 395 413 0.97

10 18 8e-09 0.00014 22.7 16.9 1 19 422 440 422 440 0.99

11 18 0.00021 3.6 8.6 6.2 10 19 489 498 487 498 0.91

12 18 0.00057 9.6 7.2 7.7 1 12 508 518 508 518 0.96

13 18 0.31 5.2e+03 -1.5 3.5 14 18 547 551 547 552 0.87

14 18 0.2 3.3e+03 -0.9 0.3 7 11 567 571 567 572 0.82

15 18 4.1e-05 0.69 10.9 4.0 1 11 588 598 588 599 0.97

16 18 0.76 1.3e+04 -2.8 1.5 15 18 608 611 607 612 0.82

17 18 4.1e-05 0.7 10.9 13.0 4 18 625 640 623 641 0.88

18 18 1.4e-06 0.024 15.6 11.5 1 16 682 696 682 701 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	2	3.4e+04	-7.8	5.6	15	19	134	138	133	138	0.81
2	18	0.01	1.8e+02	3.2	0.3	4	10	169	175	168	176	0.97
3	18	3.1e-07	0.0052	17.7	15.9	3	19	186	202	185	202	0.95
4	18	5.7e-08	0.00097	20.0	12.8	3	19	239	255	234	255	0.93
5	18	6.3e-10	1.1e-05	26.2	10.2	1	19	290	308	290	308	0.99
6	18	1.7e-06	0.028	15.3	18.9	3	19	345	361	337	361	0.88
7	18	0.2	3.4e+03	-0.9	0.8	1	5	370	374	370	379	0.79
8	18	2	3.4e+04	-5.3	2.2	5	10	384	389	384	389	0.88
9	18	4.1e-07	0.0069	17.3	17.0	1	18	395	412	395	413	0.97
10	18	8e-09	0.00014	22.7	16.9	1	19	422	440	422	440	0.99
11	18	0.00021	3.6	8.6	6.2	10	19	489	498	487	498	0.91
12	18	0.00057	9.6	7.2	7.7	1	12	508	518	508	518	0.96
13	18	0.31	5.2e+03	-1.5	3.5	14	18	547	551	547	552	0.87
14	18	0.2	3.3e+03	-0.9	0.3	7	11	567	571	567	572	0.82
15	18	4.1e-05	0.69	10.9	4.0	1	11	588	598	588	599	0.97
16	18	0.76	1.3e+04	-2.8	1.5	15	18	608	611	607	612	0.82
17	18	4.1e-05	0.7	10.9	13.0	4	18	625	640	623	641	0.88
18	18	1.4e-06	0.024	15.6	11.5	1	16	682	696	682	701	0.90

Sequence Information

Coding Sequence: atGGCGAGGAGATATAGAGATGCTGCGGCGAAACTGCAGCAAAATGTCCAAAAACATTTGCAGGAAATGAAAGAGCTATCATCGTCGGAAGATGAAGAGCCTTTTGAATCAAGCGTGCTGGAGGGTGTCTTCCAAAGCTACTGGAGAGGTGGCGGGGACTCTCATATGCTCAACAGGACTAAGAACGTTCTCGAAGAAGCCATCAGTGGCCGGTCGATCACATGTCTTATTTGTATCGGGTCCATAAAAAGAGCAGACGCGATATGGAGCTGCGGCCACTGTCACTGTTATTTCCATCTATCTTGCATACAAAAATGGTCGAACGATAGCATTAGTTTACGTAGCGAGGCAAGCCAGGGGCCTGTGACAGTGTTTGTACCTAAAAAAGTGGAGTGGTGCTGTCCGAAGTGCCGACACTCGTACTCAAAAGACGAAATTCCGCGTAAATACAGATGTTTCTGCGAGAAAACTGATGACCCACCATACCATCCATGGTTGATACCACACACCTGTGGTGAAGTTTGTGGTAAGAGATTATCAAGTGGTGATAGCTGTAAGCATAAATGCTTGCTCCTCTGTCATCCTGGACCATGCCCTCCTTGCCCTCAGACAGTCAATGGAATCTGCTTCTGTGAGAAGGAACAAAAGAGAGTGAGATGTAGTGCCGCAAAGTGGTCTTGCGGTCAGCAGTGCAAAAAGACCTTATTATGTCATGCACATAAATGTGAGAACGAGTGCCATGAAGGGGactgtccaccttgcagctACAAAAGTGTCCAACATTGTCAATGTGGTACTGAGAAAATGAAGCGACCATGCAATGATCCTGTATGGAATTGTAAGAAgtcttgtaataaaatgtatacatgTGGGTATCATAAGTGTGAGAGGTTCTGTCATTCTGGAGACTGTGGTGCGTGCCCCAACTCAGGCATGAAGACATGTCCGTGTggagcaaataaaaaatatgttcaatGTCCAGATGTCATGGAAACATGTGTAGGAACATGTGGAAAGTTACATGAAGACTGTGATCACAATTGTCCAGAAAAATGCCACAAAGGTCCATGTCCACCATGTCAAGTACTGGTACAGAAGAAATGTTATTGTGGTACACATACTAGATCACTACCATGCAGTAAAGAGTTTAAATGTGAAACTAAATGCCGAGGCACACGGCCCTGTGGGAAGCACAGCTGTGCCCGCAAATGTTGTAACGGGAACTGCCCACCATGTGAGAAAATATGTGATAAACCTCTTCAATGTGGTCGGCATAAATGTACCAACATATGCCATCATGGCCCATGCTATCCTTGCCCTCTAGAATCGAAAATAACTTGCAGGTGTAAAGAAACATACATTAGAGTTCCATGCGGAAGAGAGAGGTTTGTGAAGCCACCAAAATGTGCACTCCCatgcaaaattaaatacaaatgtgGACATGCTGAGGAAAATAGACATATGTGCCACTTTGGCGACTGCCCCCCATGTAAAGCAATATGCTACAAAACTTATCCTAAATGTGGACATGAATGCAAAGCAGTATGTCACGAATATGTTGCTGTGGTCTTCAAACAGATAGAAAAGCCTGCAACACCTTGGGAAGTGCAACCTCCAAAGACTAAGATTATGAATTTAGACTGCCCTCCATGTGAGACTCCTGTGCAAGTTGTATGTTTAGGGGAGCATGAAACTGAGGAGCAACCGTGTCATGCAGCAACACGTCGATCATGTGGAAGGCAATGCGGCCGCTCGTTGCCTTGTGGCAACCACTCATGTTCTTTAATGTGTCACCTTTTGACTAACAATGTGCTTTCAAGTTGCAGACCTTGTGAAAGAGAATGTATAGTGCCTCGTCCAGAAAAGTGTTTGCATAAATGCTTAATCAGATCATGTCATCCAGGACCCTGCCCCCCATGTGATGTGCTGGAAAGGATTCCATGCTACTGCGGTGTCACGGAACTGTATTTACGCTGCCGAGAGCTGTCAACTGCCACTGAAGACAAACTGTCATGTAAGCAACAGTGCTCTAAAAACTTGGACTGTGGGCACAGATGTCGTAATACCTGCCATTCTGGGCCTTGCAGAAACCAAATCTGCACTAGAAAAACTAAAATACATTGCCCATGCACAAATTTAAAGAAGGAAGCTCTATGTAACCTTGTTAGAAGTGGAGAAGCAAAAGTTGCTTGTGATAAATCATGTGAAGAAAAGAAAATTGCAGCTCAAatagagaaagagaaagaggaaCGCAGACAGAAAGAGTTAGAGGAAGAAAGAAACCGGAGGGAACTTGCAGAATATGAATGGAAGTTAAGCGGCAAAAAGAAGAAGTATAAGGAAAAACGTGTTGTTGTTAGTAAAGATGATAGAAACTGGGTGCAGCGTTACTGGATTcctattttatcaatattaattgtacttattgctgctttatattacatattttatgtgtaa
Protein Sequence: MARRYRDAAAKLQQNVQKHLQEMKELSSSEDEEPFESSVLEGVFQSYWRGGGDSHMLNRTKNVLEEAISGRSITCLICIGSIKRADAIWSCGHCHCYFHLSCIQKWSNDSISLRSEASQGPVTVFVPKKVEWCCPKCRHSYSKDEIPRKYRCFCEKTDDPPYHPWLIPHTCGEVCGKRLSSGDSCKHKCLLLCHPGPCPPCPQTVNGICFCEKEQKRVRCSAAKWSCGQQCKKTLLCHAHKCENECHEGDCPPCSYKSVQHCQCGTEKMKRPCNDPVWNCKKSCNKMYTCGYHKCERFCHSGDCGACPNSGMKTCPCGANKKYVQCPDVMETCVGTCGKLHEDCDHNCPEKCHKGPCPPCQVLVQKKCYCGTHTRSLPCSKEFKCETKCRGTRPCGKHSCARKCCNGNCPPCEKICDKPLQCGRHKCTNICHHGPCYPCPLESKITCRCKETYIRVPCGRERFVKPPKCALPCKIKYKCGHAEENRHMCHFGDCPPCKAICYKTYPKCGHECKAVCHEYVAVVFKQIEKPATPWEVQPPKTKIMNLDCPPCETPVQVVCLGEHETEEQPCHAATRRSCGRQCGRSLPCGNHSCSLMCHLLTNNVLSSCRPCERECIVPRPEKCLHKCLIRSCHPGPCPPCDVLERIPCYCGVTELYLRCRELSTATEDKLSCKQQCSKNLDCGHRCRNTCHSGPCRNQICTRKTKIHCPCTNLKKEALCNLVRSGEAKVACDKSCEEKKIAAQIEKEKEERRQKELEEERNRRELAEYEWKLSGKKKKYKEKRVVVSKDDRNWVQRYWIPILSILIVLIAALYYIFYV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00820620;
90% Identity: iTF_01359404;
80% Identity: -