Basic Information

Insect: Lapara coniferarum
Gene Symbol: -
Assembly: GCA_949316025.1
Location: OX438926.1:15380444-15388121[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 4.9 4.1e+02 2.6 0.8 1 23 54 77 54 77 0.95

2 21 0.18 15 7.2 3.7 1 23 84 107 84 107 0.97

3 21 4.5 3.8e+02 2.7 4.3 1 23 190 212 190 212 0.97

4 21 0.0031 0.26 12.7 1.2 2 23 218 239 217 239 0.97

5 21 1.3 1.1e+02 4.5 0.8 1 23 245 267 245 268 0.94

6 21 0.12 10 7.7 3.4 2 22 498 518 497 518 0.96

7 21 4.2 3.5e+02 2.8 1.0 1 23 616 638 616 638 0.82

8 21 0.64 54 5.4 0.3 2 23 774 795 773 795 0.96

9 21 0.046 3.9 9.0 0.2 2 23 869 890 868 890 0.97

10 21 0.39 33 6.1 0.2 2 23 899 920 898 920 0.96

11 21 0.14 12 7.5 3.4 1 23 958 980 958 980 0.95

12 21 0.00029 0.025 15.9 4.0 1 23 988 1010 988 1010 0.99

13 21 0.54 45 5.6 2.7 1 23 1095 1117 1095 1117 0.98

14 21 0.19 16 7.0 1.4 1 23 1173 1195 1173 1195 0.93

15 21 0.16 13 7.3 0.1 1 23 1201 1223 1201 1223 0.97

16 21 0.0043 0.36 12.3 0.3 1 23 1293 1315 1293 1315 0.95

17 21 0.016 1.4 10.4 1.1 1 23 1321 1343 1321 1343 0.96

18 21 0.0082 0.69 11.4 2.6 1 23 1433 1455 1433 1455 0.97

19 21 0.0002 0.017 16.4 1.4 1 23 1461 1483 1461 1483 0.99

20 21 2.3 1.9e+02 3.7 2.0 1 23 1574 1596 1574 1596 0.96

21 21 0.0034 0.29 12.6 3.7 1 23 1607 1629 1607 1629 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	4.9	4.1e+02	2.6	0.8	1	23	54	77	54	77	0.95
2	21	0.18	15	7.2	3.7	1	23	84	107	84	107	0.97
3	21	4.5	3.8e+02	2.7	4.3	1	23	190	212	190	212	0.97
4	21	0.0031	0.26	12.7	1.2	2	23	218	239	217	239	0.97
5	21	1.3	1.1e+02	4.5	0.8	1	23	245	267	245	268	0.94
6	21	0.12	10	7.7	3.4	2	22	498	518	497	518	0.96
7	21	4.2	3.5e+02	2.8	1.0	1	23	616	638	616	638	0.82
8	21	0.64	54	5.4	0.3	2	23	774	795	773	795	0.96
9	21	0.046	3.9	9.0	0.2	2	23	869	890	868	890	0.97
10	21	0.39	33	6.1	0.2	2	23	899	920	898	920	0.96
11	21	0.14	12	7.5	3.4	1	23	958	980	958	980	0.95
12	21	0.00029	0.025	15.9	4.0	1	23	988	1010	988	1010	0.99
13	21	0.54	45	5.6	2.7	1	23	1095	1117	1095	1117	0.98
14	21	0.19	16	7.0	1.4	1	23	1173	1195	1173	1195	0.93
15	21	0.16	13	7.3	0.1	1	23	1201	1223	1201	1223	0.97
16	21	0.0043	0.36	12.3	0.3	1	23	1293	1315	1293	1315	0.95
17	21	0.016	1.4	10.4	1.1	1	23	1321	1343	1321	1343	0.96
18	21	0.0082	0.69	11.4	2.6	1	23	1433	1455	1433	1455	0.97
19	21	0.0002	0.017	16.4	1.4	1	23	1461	1483	1461	1483	0.99
20	21	2.3	1.9e+02	3.7	2.0	1	23	1574	1596	1574	1596	0.96
21	21	0.0034	0.29	12.6	3.7	1	23	1607	1629	1607	1629	0.98

Sequence Information

Coding Sequence: ATGCTCCAGCAgatgtcctcgccgtcgagcgCACAATTAGGCGAGGTCGTGATTATCGTGCGCCCCTTCGAAGGCCGCGTCTACGGCGACGTGTCTTCGGGGGCCTCTTCGGATGCTGCCGAAGATTCTGAATTGCCGCATTGCAAGATAAGAAGAAACTATAGCTGCATGAAGTGCACTTACTACACGCAAAATCCGCGCGCTTATCTTATTCACACACGCGACGTTCACTTCGTAAAATTGAAGATTTTTGATTGCCCACGTTGCTTATACGCTTCGAGACACCATCAGAAATTATTGAGGCACATGAAAATGGTTCACGGAGGATCAACTTCCGAGGCATCCACTAAAATAGAACAAGAAACTTCAACGCCGGTATGCGACACCGGAGATATCTCGGAACGGATGGAAGACATGGTAGAGGAAATCGAAGACAATGAAGACATACAGATGGATGTGGATGAAATTAATGAAGAACAACCAGAGCGTTCTGATGATGCTGAAGTCGAAATTGAGAGAATTCCTGATCGAGGTGCATtagatacacaaaaaaataaggGTAACTTCTTCTCGTGTGACAAGTGCAATTACGTGACACATTTACGCGCAAGGTTCACCAAACATGTCAAATATCATTCTATGCCGATGATAAAATGCACCACATGTGATTTTCGCACACCTTACAAGTGGAACTTGGATCGTCACATGAAAAATCACGGCGGCAGCGGAAGTTTCCCCTGCTCTATGTGCAATTTTACAGCAGATATCAAACAAAGTTTAACAGTTCACGAAATGAATCATCACACGCCGCTAGTGGGCTATACCGTCGCAAGTCGCCGCCGCAATCGCGTCGGCGCGAGCGACCTATCCCTCGCCGAAGCGGCCAACGCGCTGCTCCCTAAGGAGGAAGAAGGGAGCAGCGATTCACGATCCTCGCATTCGGCCTCGGAAATGGGCCATCAATCCTCTGAAAAAGAAATAATGGCATCAAACAGTGACTCTAATGATGCATCAGTGTCGGAATCTGGATTAAAAGATCAACAGTTTTCAGAACAAACTCATTCAACCAACCCACTCGATTCGTCACAAAAACAATGTAAGAAAACTCCAAGACCCATTCCTCAGCTTATACCACTTAATGCATCAACACCCAATCAAAGTAAAACTTCGCCTGGAGAACCACcagcaaaaaaattcaaagaatcaacaaatgaaacaataaatacaaacaCAGAGAGTAAATCAGATTGCCAACCATTTACACCATTGATTAATACAAAAGAAACAGGAGCACGAAAGAAAAATGAATCATTTTTTGATAGATTAAAAGAAAGGTTGCTCACCGAAACTGGAGAAAATGGTTCGCTAACATGCAAGAATTGCGGCTTTGAAAGTAAATGCTTATCAGAACACTCCGTTCATGAAAAAAATTGTTCTTCATTAGGAAATCGTAGCACCACAAACACTTTAATGTCTAGTTTAAGTTCGACTCGTTGTCAGAACTGTAGACATAGATGCAAATCAAGCGCAGATTTACTTGTTCACATGAAAACGTGCATAAAAGCCGAAAAAACCGAAGATGCAACATTTGAAGATCCAAAAAGTATAGAGAATAGTGAAGTAGGGTCCAAAACGGAAAAAGAAATAGAACCACACCCCATGGAAAACGTAGTTTTTGTTTGGAACAATATAAATCATGATACGACCAAATTTGATACGCCGTTGGATATCAATATCAATGACGATTCTACGCTACCAGAAATGACAAGAAGTTATGAAAATGATACAGTTGATGAAAACGAAAGTATGAATTTATCACCAAGTCAAGCTGTtggaaaaaatgtatttaaatgtcCGCATTGTCCTTTCTGGGCCTCTACGGCATCCAGATTTCATGTTCATATTGTcggacatttaaataaaaagccGTTTGAATGTTCTTTATGCAAATATAAGTCTAATTGGAGGTGGGACATTACGAAACATATTAAACTGAAATCTGCCAGAGACCCTGATCACAATGATGCCAAAGTGCTGATGACCGACGAAACTGGCAGAAGAAATTACAGTAAATATAGCAAGTTTTTAGCAATGCCAGTATTAAATGACAATGGTGAGAATGAATTTCATTACTTGGACTCCAACACAGCCGTCGATGCTTCGATGGAAGTCGACGAGTCGTTCAGTGACGCGAACGACGCAACTAACACATCAACCGAAATGCAACCACTCAATCTCCAGACACAACAAAGCGAACTAAAAACTGATCTACTAGATATGAGACACGCTGATAATAAAAAGGCGAAGAAAACATTGTGGAAATGCAAAAAGTGTAATTACCGAGATCCATCAAAAGAGGCGCTGTTAGAGCATGTACGTGAACACTCGAGAGTAGAAGGTAGTGAAGATGATCCTAAAAAGAAACCTGAAAACACACCGGATCCTTCAGACTTGGCATACCGGTGCGGTCACTGCAATCAGTTGTCAAACTGGAAACACGTAATACAGCGCCATTGCCGATTGAAGCATGAAGGTGTCATTAAAGTAATAACTACAGTCAAACCAAAACCGGACCCATCAGCCATGAATGACTCGAACAATGACAGATGCCCGAAATGCCCGTACCGAGCAACCGATAAGAACGTTCTTTTAACTCATATCCAGCAACACCAGCCATCTTCTCATGCTATACTCAAGTGCTACTTCTGTCCATACTATGTTAAAGAGGAATATGAATTAGCACAACACTTGCAAATTCACGGCGTCACGGATCCAGAAGACTATATTTCTAAAGCCATGGGTTGCAGATCTCCCTTGCCAGATCCGCCAACTATACTACCTCAAGTGATTCACTCAGGTAGTACTAAAAGGCACAGATGTACAGAATGTCCTTACGAGACTAATAGCAAATCCCAATTCATGTACCATGAACAGTTCCATAGACTGCCCCCGGACACTCCCTATAAATGTCCTGAGTGTAACTACAGTGTATCCAAACGACACTTACTTCACCAACATTTAAGAGTACATGGTATTATGCCAAAGAAAAATGAAACAGAGGCAGAATTGGAAGCCACGCCAACGTctcaaaaaacagaaaatagtAATGACGTATCTATCAACACCTTAGATGAAATACCATTTGTATGGGTTTCGGCAAAAAATGAAtttcataaaatgtataaatgtcGTTACTGCTCGTATGTAAATTCCCAAAAGTGTAAAATACCCAACCATGAAAAAATTCACTGTTTCACTTTTGAAAATAGTGATGTGACGGTGTACAAATGTTTGGAATGCAAATTTACGTGCGATAACTCTGTAAGATTAGCCGAGCATTCGAAATCTCATGGTGAAATATACGGTCGAATTTATTGCCCAGTCGAAGATGATACTCCAGATGAAGAGCAAGTTTCAAAATTACGTAAAGTAATTGAACTTGAAAAATCTAATTTTGCAGATGTAACGATTAAAGAAGAATATACAAATAATGACaataaggaaataaaaattttacactTTTGTGCTAAATGCCCTGCAAGATATTTTACTGAAAGTGAATTAAAAGTGCATGAGAACTTCCACGAATCAACTTATGCATATAGATGTAAAAATTGTGATTTCGCAGTTCCAGAAGAAGATGAACTAGTATTACATCATATTGTGCACTCAGATGAATACCATACCAAAACAAAAATGCTTAAATTTGTCCATAACTTGCACCCTGCATATAAAGAGCCTCGATTAGAACTAGTTCAATACCAAGATACCTTAGAAGTAGTGTGGGTAGCGAATACTATCAAGAATAATGAAAATGAACATAATGTTGAAATTATGACTATTAAGAAACACGAGCCAAAACATGCACCCAAACAATACATTTGCAAAGAATGTCCGGCCAAATTTTTCAAAAGTTCTGCACTAAGTTACCACATGGGTTTACACGGGGGAGAAGGAGAGCACAAGTGTAAAAAATGCTCGTACGCTGTAAAGAATGTCGGAAATTTAGCAAAACACGAACTCCTACATGAACGAGAGAACAAAGTAAGCAATTGTGATTATGAATCCGGCGAAGATATGGACTATAAAAATGTTCCACTCTCAGGAACCGACCTATTTCAGAGAAAAACTGAAGCACAAAAAAGAGTATTAATTGATAAAGATAAGTTGGTTAAACCCAATGACCATTTTCCACCAGTGCTTCAAGCCGACCCACAATTCGGTTATCTTATGCATGGTAATCCAGAATTTATTTAtccaacatatttaaaaaatggacGCCAAAAAGAAAAACGCTACAAATGCCACAAATGTCCTTCCGCATTCGAAAAAAGGGAGCAATATAAAATCCACCTCTCTTTGCACGGATCGAAACAGCGATATAAATGTGAGCTCTGTGATTACTCTGTGAAATATTATGCGAATTATGTTCAACACATGCGGAAACATCAAATGAACGACGAAGCTCAAGCTGAGAGAAAAAAAGGATGTAGTGGTTTTTCAGAATCTGAAAGTCACGACATTAAGCAGGAAGATAGTTCTGATAATATAAAGCTAGCTATTAAAACTATGCCAAGAGGAACGCCTAGAAGTGACTTCCAACAATTTTCGATAAGAGACCAACAAACCCTACGATTATTACAGCGTAGGAGATCTATAAATAATTCTGGAAAAGAGACAAACACATCAGAATCATCCCCAACAAAAGAACGCAAACTGCATATGTGTTTATTATGTCCATATACAAACCAACGTCAAGATGCTTTGAGCAACCACTACAAGCGCCACGATGATACCGATGTACTCACTTCGGGCAACCATAAATGTTCTTACTGTGACTTGGTGGTCGTCCAGTCTCACTTTCTACGAGAACATTTGAAAACACATTTCAACTATCACAAGACTTTAACTCCTGAATGCTTCGTGGCAAACGAAGACGTCAGCTTTACCATAAAAAGAATGGATGAAACAAGTGAGCCAGTTGATCtcaaattaaattttcaaaatataaattataagtgCAATGAAAAAGAGAAATTCTTTGTCAAAATGAACACAGGAGAATTATTggtagaataa
Protein Sequence: MLQQMSSPSSAQLGEVVIIVRPFEGRVYGDVSSGASSDAAEDSELPHCKIRRNYSCMKCTYYTQNPRAYLIHTRDVHFVKLKIFDCPRCLYASRHHQKLLRHMKMVHGGSTSEASTKIEQETSTPVCDTGDISERMEDMVEEIEDNEDIQMDVDEINEEQPERSDDAEVEIERIPDRGALDTQKNKGNFFSCDKCNYVTHLRARFTKHVKYHSMPMIKCTTCDFRTPYKWNLDRHMKNHGGSGSFPCSMCNFTADIKQSLTVHEMNHHTPLVGYTVASRRRNRVGASDLSLAEAANALLPKEEEGSSDSRSSHSASEMGHQSSEKEIMASNSDSNDASVSESGLKDQQFSEQTHSTNPLDSSQKQCKKTPRPIPQLIPLNASTPNQSKTSPGEPPAKKFKESTNETINTNTESKSDCQPFTPLINTKETGARKKNESFFDRLKERLLTETGENGSLTCKNCGFESKCLSEHSVHEKNCSSLGNRSTTNTLMSSLSSTRCQNCRHRCKSSADLLVHMKTCIKAEKTEDATFEDPKSIENSEVGSKTEKEIEPHPMENVVFVWNNINHDTTKFDTPLDININDDSTLPEMTRSYENDTVDENESMNLSPSQAVGKNVFKCPHCPFWASTASRFHVHIVGHLNKKPFECSLCKYKSNWRWDITKHIKLKSARDPDHNDAKVLMTDETGRRNYSKYSKFLAMPVLNDNGENEFHYLDSNTAVDASMEVDESFSDANDATNTSTEMQPLNLQTQQSELKTDLLDMRHADNKKAKKTLWKCKKCNYRDPSKEALLEHVREHSRVEGSEDDPKKKPENTPDPSDLAYRCGHCNQLSNWKHVIQRHCRLKHEGVIKVITTVKPKPDPSAMNDSNNDRCPKCPYRATDKNVLLTHIQQHQPSSHAILKCYFCPYYVKEEYELAQHLQIHGVTDPEDYISKAMGCRSPLPDPPTILPQVIHSGSTKRHRCTECPYETNSKSQFMYHEQFHRLPPDTPYKCPECNYSVSKRHLLHQHLRVHGIMPKKNETEAELEATPTSQKTENSNDVSINTLDEIPFVWVSAKNEFHKMYKCRYCSYVNSQKCKIPNHEKIHCFTFENSDVTVYKCLECKFTCDNSVRLAEHSKSHGEIYGRIYCPVEDDTPDEEQVSKLRKVIELEKSNFADVTIKEEYTNNDNKEIKILHFCAKCPARYFTESELKVHENFHESTYAYRCKNCDFAVPEEDELVLHHIVHSDEYHTKTKMLKFVHNLHPAYKEPRLELVQYQDTLEVVWVANTIKNNENEHNVEIMTIKKHEPKHAPKQYICKECPAKFFKSSALSYHMGLHGGEGEHKCKKCSYAVKNVGNLAKHELLHERENKVSNCDYESGEDMDYKNVPLSGTDLFQRKTEAQKRVLIDKDKLVKPNDHFPPVLQADPQFGYLMHGNPEFIYPTYLKNGRQKEKRYKCHKCPSAFEKREQYKIHLSLHGSKQRYKCELCDYSVKYYANYVQHMRKHQMNDEAQAERKKGCSGFSESESHDIKQEDSSDNIKLAIKTMPRGTPRSDFQQFSIRDQQTLRLLQRRRSINNSGKETNTSESSPTKERKLHMCLLCPYTNQRQDALSNHYKRHDDTDVLTSGNHKCSYCDLVVVQSHFLREHLKTHFNYHKTLTPECFVANEDVSFTIKRMDETSEPVDLKLNFQNINYKCNEKEKFFVKMNTGELLVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01359347;
90% Identity: iTF_01359347;
80% Identity: -