Basic Information

Insect: Lapara coniferarum
Gene Symbol: -
Assembly: GCA_949316025.1
Location: OX438930.1:24311983-24323757[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.096 8.1 8.0 2.2 1 23 1915 1938 1915 1938 0.95

2 9 3.7 3.1e+02 3.0 1.4 3 23 1965 1986 1963 1986 0.89

3 9 0.81 69 5.1 2.2 3 23 2013 2033 2012 2033 0.92

4 9 0.029 2.4 9.7 1.6 1 23 2037 2059 2037 2059 0.93

5 9 0.00054 0.045 15.1 0.2 2 23 2066 2088 2065 2088 0.96

6 9 3.2 2.7e+02 3.2 2.4 3 23 2095 2116 2093 2116 0.94

7 9 0.00015 0.012 16.9 2.5 2 23 2124 2146 2123 2146 0.96

8 9 0.00017 0.014 16.7 0.6 1 23 2155 2177 2155 2177 0.98

9 9 3.2e-05 0.0027 18.9 1.0 1 23 2183 2205 2183 2205 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.096	8.1	8.0	2.2	1	23	1915	1938	1915	1938	0.95
2	9	3.7	3.1e+02	3.0	1.4	3	23	1965	1986	1963	1986	0.89
3	9	0.81	69	5.1	2.2	3	23	2013	2033	2012	2033	0.92
4	9	0.029	2.4	9.7	1.6	1	23	2037	2059	2037	2059	0.93
5	9	0.00054	0.045	15.1	0.2	2	23	2066	2088	2065	2088	0.96
6	9	3.2	2.7e+02	3.2	2.4	3	23	2095	2116	2093	2116	0.94
7	9	0.00015	0.012	16.9	2.5	2	23	2124	2146	2123	2146	0.96
8	9	0.00017	0.014	16.7	0.6	1	23	2155	2177	2155	2177	0.98
9	9	3.2e-05	0.0027	18.9	1.0	1	23	2183	2205	2183	2205	0.98

Sequence Information

Coding Sequence: ATGCCGACAACACGAAGCAACAAGAGCGCTGCGCAACCAGAAGCAACGATGCCTTCAGTTCCAGTCACCGCGGCGGCCACGACCACGACCGACACGCCATCGGGCTCGACGGTTACCACGACGTGGACGCACGGTACGACGACGACTGCGACGACCGCGACCGAGACTCAACGGGCACCGGGGCAGGGGGTAACCCCTCGGGCCATGTCTGTAAGGGCTGGGAGTTTGGCGCGATCACAgaacaagaaaaagaagaaggaaCTGGAAGCGAGGGCAGAACTGGCAAGAATCGAGCTTCAAGTGGCGCAAGCGGCAGCGGCACAAGCGAGGGCGCAGTTGGAACTTTTGCAGCTTGACGATGATGAAGATTCCCTCGTTGATGAAGAACTCTCCGACAAGGAAGATGACGTGTCACAATGGGTGGAGGCTACGGTGAAGACGCCCGGGCAGGGGCGAACGGATATGGCACCGCCAACCACCGAACCCGCACCCTCGAAGGAACATAAGAGTGACACGCAACATTTAACTGACGCAATCATCAAGGCGATTGCGACCGCGAGGCCCGGAACGACGACGCCATCCTTCCTGCACGACCTACCTGCATTCGACGGGAACTCTGGGGAATGGACCGCATTCAAGACGGTGTATGAAGACACGGCACCGCTTTTCACCTGCACGCAGAATATGGCCCGGCTGAGGAAAGCGATCAAGGGACTAGCCAGGGACACTGTGAAGAGCGCGCTGTATTCCGACTGCAAACCGGAAGATGTCTTGGAAGCACTGCGCCGCCGCTTCGGGAGACCAGATGCGCTGGTTCTGGCAGAATTGGAGAAATTGAAAAATCTGCCGAAGTTGAACGACAACGCCCGCGACGTGTGTATATTCGCCAGCCACGTGAACAACACCGTCGCCGCCGTAAGGGGCTTGAAGAAGCCACAGTACCTGCAATCTCCGGAGATGTTGAAGCACATCGTGGACAAGATGCCTGCAATCATCCGCTATCGGTGGTACGACTTCGCGGCCGACAGGGAGCCGGAAGATCCTGACctgctgatgataatgaagttcCTCAACAGGGAAGCGGACCGATGCGGACCATATGCAATGCAAGAAGTGGGATCCACAAGGAAGCAAGCTCCGGTGAGGCAGGCGGCCCATACTGCAACGGAACCCGAAGAACCGAAAACAAGAAAAACCGAATGCGGCCACTGCGAAGGAGAACATCGGATGCTCGAATGCTCGAAGTTCGCTCAAGCCCCCGTCAAGGAACGCTGGGAATCGGTGAAGAAGAGCAGATTATGCTTCAAGTGTCTTCAAGGCCGGCATCGCAAGGAGACCTGCAGAGCGCCTGGGTGCAAGAAGTGCAAACGCTGGCATCATCAGCTGCTTCATGAAGATCGTGAAGAGCCAGAGAAGAAAGAGGTCACCAGCAACGTGCGCTCCGCTGTCAACTTCGCTGCCGACAGAAGAGCTTATTTGAAGATCGCTCCGATAGAGGTGTATGGACCCAAGGGGTCACTGAAGATTCTGGCGCTACTCGACGAGGGGTCAACGGTTACGCTGCTGGACTCTACGGTGGCTGAAGCGGTCGGGCTCCGGGGGCCACAAGAAAGGCTCACATTAGAAACTGTGGGCGgaacaaaagtaacgaaaatggATTCGATGAAACTCGACTTCGAGATCAGAGGCGTTCATCAACAGAAGAGTCGAGCGGTGAAAGGCGCGAGGACGATAGATGACATCCACCTCACACCTCAGAAGATAGAACAGGAACGCGTTAAGAAGTGCGCTCACCTCCGCAACCTTGTGAAGCAATTGATTTACGAAGATGAACCTCCGAAGATGCTGATCGGACAAGATAATTGGGAGCTGATCGTCTCGAAGAGTACCAAGAAGGGTCCAAGCGGTCAGCCGGTGGCATCGTTCACGCTTCTCGGATGGGTTCTGCACGGGTTCGACGGGGGGAGCTCGAGACCGGTGCACAATTTAACGTGCGCTCATGTCTCGGCTCGAGAAGATGAATTGGACGCGCTAATCAAGAACCATTTTGCAGTGGAATCGCTCGGGGTGATGCCGCGACGGCCTACAACCGACGCGGACGGACAGGCGTTGAAGATTTTAGAAGAAACGAGCCGTCAGCTGCCGAACGGTCGTTACGAAGTCGGGCTCGTGTGGAAGAGCGCCGATGAGAAGCTGCCGGATAACTTCAAGTCTGCAGAAACGCGCCTGAGAACAATCGAAAAGAAGCTCGACCGAGACCCCGACCTGAAAGAAGATTACGGGAAGCAGATCAAGAATCTCATCGACAGCGGTTACGCGGAAGAGGCGAGTCGCAGCTCACAATCCGCAAGAAAATGGTACCTGCCACATTTCACCGTCACGCATCCGACCAAGAAGAAACGTCGTTTGGTGTTCGACGCTGCAGCGAAGTTCGACGGGAAGAGTTTGAACGACGCGTTGCTGTCCGGGCCAGATCTGCTTCAGTCGCTCTTCGGAGTGCTACTGAGGTTCCGGCAGTGGCCCATTGCTGTGGCGGCGGACATCAAGGAAATGTTCCTGCAAGTGAAGATGAAGGAAGAGGATCGTGACAGCCTACGTTTCCTGTGGAGAGGCGACAGGCGGACAGGACCACCACAAGAGTACCGGATGTCTTCCCTAATCTTCGGCGCCGCCTGTTCACCGAGTGCTGCAATCTTTGTGAAAAACAAGAACGCGGCGCAATTTGAAGAACAGTATCCCGAAGCGGCGCGCGCGGTGGTGCGCAATCATTACATGGATGATTATCTTCACAGTTTCAGAACCAACAGCGAGGCGATCAAGATAGCAAAAGAGGTCGACATCATTCACCGCGCCGCCAAGTTCGAGCTACGCGGATGGGTCTCCAACGATCGGAAGGTGCTGGCAGCGCTCGGACAGCAACCCGAGCGCAACGAAGTCGAGCTGGGATCCAAGGAAGAGAAGACTCTGGGCCTGCGCTGGTTCACTGCTGAGGACGAAATGGGGTTCCGGACGAACATGCGAAACGTGAGCGAAGAGGTCGCAAGCCGAGGGAAAACTCCCACCAAGAGGGAGGTCACGAGCGCTGTGATGTCTACATTCGACCCGCTGGGGTTAGCCGCcccagtgttaatccagggaaaGCGGCTCATTCAAGACATATGGAAGAGCGGCGTCGGATGGGACGAAGACATCAAGCCGGAAGAGGAACGAGCCTGGGACGCATATCTAACTCATTTGACTCTTCTCAGGGAACTCCGATTGCCAAGGTGCGTCGCCCGCAGCTGCCACGAGGGGGAGCTGCACGTGTTCTGCGACGCGAGCGAGACGGCGTACGCGTGCGCCGCGTATTGGAGGCAACGGCGCGACGACGGAAGCTACGAAGTCGCGCTCCTGGCGGGCAAAGCCAGGGTCACTCCGCTGAAGCCGGTCTCAATCCCGAGACTGGAGCTGCAGGCGGCTCTGCTGGCAACACGGATGGCGCAGGCGGTGCGAGAAGAATTGGACATGGCCATCGGCGGGGTGACATACTGGACGGACTCCAGCACCGTGCTCTCCTGGATCAAGACGGACCCCAGAACATTCAAGCCCTTCGTCGCGCACAGACTAGCGGAAATCGAAGACACATCAAAACCGCAACAATGGCGCTGGGTACCTACGAAGCAAAACCCGGCCGACGACGCGACGAGAGCCGTGCCAAAGGACTTCGATAACAATCATCGTTGGTTCACGGGTCCTGAGTTCCTGCGAAGCGGAGAAGACGCGTGGCCGCGGGCGCGCGATTTCAAGGCAGAACATACGGGTGAAGAAAAGGAGTGCCGCGTCGCCGCTACAGTCACCGCAACGGGCGAATTCATCACACCTGCGCCAGAGAAGTTTTCCAAGTGGACACGGCTGGTGAGGGCGACCGCAAGAGTACTGCAGTTCATCCAACTGTGTCGAAGAGGGCAACCGGTCAACGTCAGCCGCAAAACCGAAGCACAAGATCCCACTTGGAAgcgaaataagaaaaaatgtaccGACGGCGGGAAGCAAGTTACTACGCGCCAACCCGCGAGAAGCTTCCAGCCTTTAGATCCAGAGCTCGTCGAGGCGGCGGAGCGCCTACTTCTAAAGAGGTGTCAAGCAGAAGACTTCGGGCGGGAAATCGGCCTGCTGAAGCAAAAGAAACCCCTCGAGAAGAGCagcaaattaagaaaattggcaGTCTTGTACGAAAACGAATTGATAAGAGTACACGGGCGGAtcgacgcggcagtgaacatcgCAACACAATACAAGAGGCCGGTGATCCTGGATAGCCGCAACCACATCGCAAGACTCATCATACAGCATTACCATGAACACTTCAATCATGGTAACCACGCGACGGTCATGAACGAGCTGCGGCAGAAGTACTGGGTGGTGGGCCTGCGGTCGGCGGTGCGACACATCGTGCGTCGGTGCCAGTGGTGCAAAGTGTACCGCAGTGCGCCACAACAACCTCCAGTGGGCGATCTACCTAACGAGAGGCTGCGTCACGGCGAGCCACCATTCACTCACTCGGGGGTCGACTACTTCGGCCCCATGACAGTCACCGTCGGACGAAGACACGAGAAGAGATGGGGAGTGCTCTTCACATGCCTGACAACAAGGGCAGTCCACGTCGAGCTAGCTTCGTCACTCTCGACCGACTCTATGATCCTGGCGCTGAGACGGATGGCGGCGAGAAGAGGCATGCCGAAAACCCTGTTCAGCGATAACGGCACGAATTTCGTCGGCGCGAACAAGGAGTTGCAAGAGGCGGCAGAGACGCTGAAGAAAGAAGAGCTGGCGGGAGCTGCCGACGAGTTGGGCGTGCGGTGGAAATTCATTCCGCCCGGCGCGCCTAACATGGGCGGTGCGTGGGAGCGCCTGGTCCGCTCGGTGAAGACGGCCCTGGCGGCGACGCTCCGAGAGAGGCATCCTCCAGAAGAAGTTCTCCACACACTCATCGCGGAGGCGGAGCACGTGGTGAACTCGCGCCCACTCATCACCGGGGAAGAGAACCCGGCGGAAGAAGCACTAACCCCAAACCATTTTTTAATAGGCAGATCGTGTGGTGCTGGGCGCATCGGTGCCTTCGCGGACAATGACCTGTCCGGGAGGCGGTCATGGCGGACGGCGCAACGGCTCGCTGACCACTTCTGGAGCCGGTGGGTGAAGGAGTACCTCCCCACGCTCCTGCCACGGAAGATCGACGGTCGGGCGAGCGACCGCGACCTACGGTGCGGTGACGTCGTCCTCATTGTGGACTCCAGCCTGCCACGCTGCGTCTGGCCGAGGGGCCAGATCATCGGCGCGCATCCGGGACCCGACGGCCGGACCAGAGTCGTCGAGGTGCGCACAGCGAACGGCGTGCTACGACGGCCGAGCTCCAAGGCGGTGCTGCTGGTTCCGGCAGCGTCACCAGGACAGGACCGGAGTGCTGCGCACGAGGGGGAGgatgttggcgacgcgccggctcccattagccgcgtgccgacccctcagaacaataATGTTGCAATAGAATCAACATTAACAGAGAATGAACAAATTGTTGCACAACCAAGTtcttacaacaaggaaaatgaggaaaatataaagaatgTAAAAAAGAATCCGAAAgaaaaattaagcaaacaaggtgAAAAACGTTATGCCAATTATCTGAAACCACGATTAAATGTCTGTGTGCTTCTGGAGAATTCTACACTAATGCCTTTCAAAGCGGATAAAGGATGTTTCCTTTGTTTCTACTGCGTCAAACCGTTCGCCTTATTCGACGAGTTGAAACAGCACACAATGACGTGTCATGCAAACGTCTCCTCCAAGGACATTATGAAGCGACTCTATAAGCCGGAAAGAGTCAGGGCTGAGGCGAGCAATATTAATTGCAAGATATGTCATCACAAACTGGACACTGTCAATAGCCTTGTGGCACATTTGGTTCAAAGACACGACATACAATTCAGTGACCATGCGAGGAAGCCGGTCGACTGCATTATTGCGTACGACTTAAGCGACGGTAAAAACAGATGCATCATCTGCAGAAAAGAGTTCTTTTTCTTCAAATCTTTGTCTAAACACATGAATGAGCATACCACCAATTATGTGTGCCCCACATGTGGCAAGTGCTTTTTGTTGCCGAAAAGATTGCAGACTCATAAAAACGCACACAAAGCCGGACCATCCGTGGAATGCGAGCAGTGCGGAAAGAAGATAAAGAACGAGTACTTGCTTAAAGTCCACATTCGTAACGTTCACAATAAACCTAAGTACGGGTGCACTGTTTGCAACTTAAAGTTTTGCACGTTCAGAGATAGACTGGCGCATTTGGATAAAAGTCACGGGATGAAGACGACCAATTTGAAATGTTCGCAATGCGACAAGTCGTTTAAGTTGCCGCAGACACTGAGCGCTCACATGAGACACACACATATGAATATACGGAACGATGGCCACTACCCCTGCAACCTGTGCTCCAGAGTGTTCAACAAGAAGACCGGTCTGAAGACACATTTATTGGTGCATACAAAAGAGAGGAATTTTGAGTGTTACGTGTGTAACAAAAAATTCGGTCGAAACTCTACGTTGTCGGAGCACCTGCGCATCCACGCGGAGGAGCGCTGCGGGGCGCGGGGCGTGCCGCGCGGGCACAAGTGCAGGCCGCACGGCGCACGCGCACGTCGCTGTGCACCACAAAGGCTCACACATTAA
Protein Sequence: MPTTRSNKSAAQPEATMPSVPVTAAATTTTDTPSGSTVTTTWTHGTTTTATTATETQRAPGQGVTPRAMSVRAGSLARSQNKKKKKELEARAELARIELQVAQAAAAQARAQLELLQLDDDEDSLVDEELSDKEDDVSQWVEATVKTPGQGRTDMAPPTTEPAPSKEHKSDTQHLTDAIIKAIATARPGTTTPSFLHDLPAFDGNSGEWTAFKTVYEDTAPLFTCTQNMARLRKAIKGLARDTVKSALYSDCKPEDVLEALRRRFGRPDALVLAELEKLKNLPKLNDNARDVCIFASHVNNTVAAVRGLKKPQYLQSPEMLKHIVDKMPAIIRYRWYDFAADREPEDPDLLMIMKFLNREADRCGPYAMQEVGSTRKQAPVRQAAHTATEPEEPKTRKTECGHCEGEHRMLECSKFAQAPVKERWESVKKSRLCFKCLQGRHRKETCRAPGCKKCKRWHHQLLHEDREEPEKKEVTSNVRSAVNFAADRRAYLKIAPIEVYGPKGSLKILALLDEGSTVTLLDSTVAEAVGLRGPQERLTLETVGGTKVTKMDSMKLDFEIRGVHQQKSRAVKGARTIDDIHLTPQKIEQERVKKCAHLRNLVKQLIYEDEPPKMLIGQDNWELIVSKSTKKGPSGQPVASFTLLGWVLHGFDGGSSRPVHNLTCAHVSAREDELDALIKNHFAVESLGVMPRRPTTDADGQALKILEETSRQLPNGRYEVGLVWKSADEKLPDNFKSAETRLRTIEKKLDRDPDLKEDYGKQIKNLIDSGYAEEASRSSQSARKWYLPHFTVTHPTKKKRRLVFDAAAKFDGKSLNDALLSGPDLLQSLFGVLLRFRQWPIAVAADIKEMFLQVKMKEEDRDSLRFLWRGDRRTGPPQEYRMSSLIFGAACSPSAAIFVKNKNAAQFEEQYPEAARAVVRNHYMDDYLHSFRTNSEAIKIAKEVDIIHRAAKFELRGWVSNDRKVLAALGQQPERNEVELGSKEEKTLGLRWFTAEDEMGFRTNMRNVSEEVASRGKTPTKREVTSAVMSTFDPLGLAAPVLIQGKRLIQDIWKSGVGWDEDIKPEEERAWDAYLTHLTLLRELRLPRCVARSCHEGELHVFCDASETAYACAAYWRQRRDDGSYEVALLAGKARVTPLKPVSIPRLELQAALLATRMAQAVREELDMAIGGVTYWTDSSTVLSWIKTDPRTFKPFVAHRLAEIEDTSKPQQWRWVPTKQNPADDATRAVPKDFDNNHRWFTGPEFLRSGEDAWPRARDFKAEHTGEEKECRVAATVTATGEFITPAPEKFSKWTRLVRATARVLQFIQLCRRGQPVNVSRKTEAQDPTWKRNKKKCTDGGKQVTTRQPARSFQPLDPELVEAAERLLLKRCQAEDFGREIGLLKQKKPLEKSSKLRKLAVLYENELIRVHGRIDAAVNIATQYKRPVILDSRNHIARLIIQHYHEHFNHGNHATVMNELRQKYWVVGLRSAVRHIVRRCQWCKVYRSAPQQPPVGDLPNERLRHGEPPFTHSGVDYFGPMTVTVGRRHEKRWGVLFTCLTTRAVHVELASSLSTDSMILALRRMAARRGMPKTLFSDNGTNFVGANKELQEAAETLKKEELAGAADELGVRWKFIPPGAPNMGGAWERLVRSVKTALAATLRERHPPEEVLHTLIAEAEHVVNSRPLITGEENPAEEALTPNHFLIGRSCGAGRIGAFADNDLSGRRSWRTAQRLADHFWSRWVKEYLPTLLPRKIDGRASDRDLRCGDVVLIVDSSLPRCVWPRGQIIGAHPGPDGRTRVVEVRTANGVLRRPSSKAVLLVPAASPGQDRSAAHEGEDVGDAPAPISRVPTPQNNNVAIESTLTENEQIVAQPSSYNKENEENIKNVKKNPKEKLSKQGEKRYANYLKPRLNVCVLLENSTLMPFKADKGCFLCFYCVKPFALFDELKQHTMTCHANVSSKDIMKRLYKPERVRAEASNINCKICHHKLDTVNSLVAHLVQRHDIQFSDHARKPVDCIIAYDLSDGKNRCIICRKEFFFFKSLSKHMNEHTTNYVCPTCGKCFLLPKRLQTHKNAHKAGPSVECEQCGKKIKNEYLLKVHIRNVHNKPKYGCTVCNLKFCTFRDRLAHLDKSHGMKTTNLKCSQCDKSFKLPQTLSAHMRHTHMNIRNDGHYPCNLCSRVFNKKTGLKTHLLVHTKERNFECYVCNKKFGRNSTLSEHLRIHAEERCGARGVPRGHKCRPHGARARRCAPQRLTH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -