Lcon013700.1
Basic Information
- Insect
- Lapara coniferarum
- Gene Symbol
- CDC5L
- Assembly
- GCA_949316025.1
- Location
- OX438925.1:6560090-6570190[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.7e-17 7.2e-14 52.5 1.8 2 46 9 54 8 54 0.97 2 2 5.4e-12 8.3e-09 36.3 0.1 1 45 60 103 60 104 0.93
Sequence Information
- Coding Sequence
- ATGCCGCGGATTATGATAAAGGGCGGCGTTTGGCGCAACACCGAGgATGAAATCCTTAAAGCAGCTGTAATGAAATATGGCAAAAATCAATGGTCTCGTATAGCATCATTGCTTCATAGAAAATCTGCCAAACAATGCAAGGCTCGTTGGTACGAGTGGTTGGATCCCAGTATCAAGAAAACAGAATGGTCGCGAGAGGAGGACGAGAAGCTGCTGCATCTGGCGAAACTGATGCCCACTCAGTGGAGGACCATAGCTCCCATCATTGGTCGTACTGCAGCGCAATGTTTGGAGAGATACGAATATTTACTggATCAAGCACAAAAAAAAGAAGAAGGGGAAGATGTAAGTGATGACCCTCGTAAGTTGAAGCCGGGTGAAATTGATCCAAACCCTGAAACAAAGCCCGCCAGGCCTGATCCCAAGGATATGGATGAGGATGAGCTGGAGATGCTGTCGGAAGCTCGAGCTCGTCTGGCCAACACGCAGGGTAAGAAGGCAAAGAGGAAGGCGCGTGAAAAGCAACTGGAGGAGGCGCGCCGCCTCGCTGCCTTGCAGAAGAGGAGGGAACTGAGCGCTGCTGGTATTGCAGTGCCAATCAGGCGAAAGAAAAAGCGTGGTGTAGACTATAACTCAGAGATTCCGTTTGAGAAGAAACCGGCATCAGGTTTCTATGACACATCCACTGAAGTGGTGGATCCAATGGCGCCTGATTTCTCGCGACTTAGACAGCAACATCTCGATGGAGAGTTACTTTCAGAAAAGGAAGAGAGGGAGAGACGCAAAGACAAGCAAAAATTGAAGCAACGCAAGGAAAACGATGTCCCTCAAGCTATGCTTCAAGGGGATCAACCGGCGCGCAAACGAAGCAAACTCGTTCTGCCAGAACCTCAAGTAACTGACcagGAGCTGCAGCAGGTGGTGAAGCTGGGCCGTGCGTCGGAGGCGGCGCGCGAGTCTGCGGCGGTGGCGGGGGCCGGGGCGGGGGCGGGCGGCGCCACGGACGCGCTGCTGGCCGAGTACGCCGTGgcgcccgcgcccgccaccgcgcTGCGCACGCCCGCCATCCAGCACGACCGAATTTTGATGGAAGCTCAGAATGTGATGGCTCTGACACATGTGGACACTCCACTGAAAGGTGGCTTGAACACGCCACTACATGAGAGCGACTTCTCAGGTGCTTTGCCACAGTCTCAAGTAGTCGCCACGCCTAACACTGTTCTAGCTACGCCCTTCAGATCAGCACGCAGCGAAGTATCGACGCCGAGTAGTTTCAATACCCCAAGCCAAGGAGGAACGGGTCAACCAGGCCTTACTCCAGGACTACGTGACAAATTAAGCATAAATCCTGAAGACAGATTGGGTGGTGGGGACACTCCTCAATTAGCTAATCAGATGCAAAAACAACTAAAAGCGTCTGTACGTAACGCGCTTCAGGCCTTGCCGACTCCCAGGAACGATTATGAGATTGTAGTTCCCGACCAAGAGGGAGACGAGGAGAAAGAAAGCACGGCATCTGCTCCTCTGGTGGAAGATCAAGCCGATGCAGACGCTAGATATGCGCAAGAGCAAGAGGAAAAACGTGTGGCGGCGCTGGCGCGGCGTTCGTCGGCAGTGCAGCGCGGGTGCGCGCGGCCGGCGGACGTCAACGCGACCGTCGTGCGCGGCGCCGCCGGACAGCTCACGCCGCTGCAGCAGGCCGAGGAGCTGCTCAAGGCAGAGATGGTCACCATGCTGCACTACGACGCGCTGCGGGACCCGCCGCCAGgCGTTGATAAGAAAAGAGCTGTGCAGCTGCAAGCTTCACATTTGGCATATCTAGAACAACATCCATACGAAGAGTTCTCTCCTGAAGAATTAGCGATTGCCAAACAAGAACTGAAGAAGGAAATGGATGTTGTCAAAACTGGCATGGGACACGGCGAGCTCAGCATAGAGGCTTACACACAAGTGTGGGAAGAGTGTCTTGCACAGGTATTGTTTTTACCTGGCCAAAATAGATATACGCGTGCGAATTTAGCTAGCAAAAAGGACAGATTAGAATCCGCAGAGAAAAGACTGGAACAGAACAGAAATCACATGGCGAAGGAAGCCAAGAAATGTTCTAAGATGGAGAAAAAATTAAGAGTATTAACTGGGGGATATCAGAGTCGCGCAGCATCGCTGATTAAACAATTCCAGGAATTACAAGATCAAATAGAACAGGCTAATTTAGAACTGTCGACATTCAAATTCCTCGCCGAACAAGAGAAAGCCGCCATTCCACGTAGAATAGAATCACTGACGGAGGATGTCAACCGTCAAACTGATCGCGAGAAGCAACTGCAAAAGAGATATTCAGAGCTGCAAGCCGACCTGGAAGACATCCATAAAGGAACGCAGAAAGTTAAGGAAGTGGAAGCGAAGAGGAAATCTAGTGAGGAGTAA
- Protein Sequence
- MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWYEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTIAPIIGRTAAQCLERYEYLLDQAQKKEEGEDVSDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELSAAGIAVPIRRKKKRGVDYNSEIPFEKKPASGFYDTSTEVVDPMAPDFSRLRQQHLDGELLSEKEERERRKDKQKLKQRKENDVPQAMLQGDQPARKRSKLVLPEPQVTDQELQQVVKLGRASEAARESAAVAGAGAGAGGATDALLAEYAVAPAPATALRTPAIQHDRILMEAQNVMALTHVDTPLKGGLNTPLHESDFSGALPQSQVVATPNTVLATPFRSARSEVSTPSSFNTPSQGGTGQPGLTPGLRDKLSINPEDRLGGGDTPQLANQMQKQLKASVRNALQALPTPRNDYEIVVPDQEGDEEKESTASAPLVEDQADADARYAQEQEEKRVAALARRSSAVQRGCARPADVNATVVRGAAGQLTPLQQAEELLKAEMVTMLHYDALRDPPPGVDKKRAVQLQASHLAYLEQHPYEEFSPEELAIAKQELKKEMDVVKTGMGHGELSIEAYTQVWEECLAQVLFLPGQNRYTRANLASKKDRLESAEKRLEQNRNHMAKEAKKCSKMEKKLRVLTGGYQSRAASLIKQFQELQDQIEQANLELSTFKFLAEQEKAAIPRRIESLTEDVNRQTDREKQLQKRYSELQADLEDIHKGTQKVKEVEAKRKSSEE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00282289;
- 90% Identity
- iTF_01010308; iTF_00063530; iTF_00341265; iTF_00858490; iTF_01316306; iTF_01317242; iTF_00290644; iTF_00787602; iTF_00820021; iTF_00819112; iTF_00113274; iTF_00114050; iTF_00112445; iTF_00428063; iTF_00428955; iTF_01429883; iTF_00187104;
- 80% Identity
- -