Lpop028647.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Laothoe populi
Gene Symbol
gatad1
Assembly
GCA_905220505.1
Location
HG992170.1:2239483-2242279[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.1e-11 3.6e-07 30.6 3.2 1 31 6 34 6 39 0.92

Sequence Information

Coding Sequence
atgccAAAACCGATATGCGTACAGTGCAACACAAACGACTCTTTGCTTTGGCGGAGCGGCGAAAACGGGCAAATATGTAACGATTGCCATCTCGCAAACACGGCTAAAGATTCAAAACCTGAGAGCTCAATAAAAGTCGAGGGCGATGAAATTAAGGAAGAGAAGGAAGATAGTAAGAATGGGAGGACTGAGGGAGAGTCTACGCCTGCTAAAGCGACTGGTAAGGGAACGAGAAAGAGTACTAGATCGACTAGATATAAAGCTAAGACTCCCGCGCCAACTCCTTCGAAAACAGCGGCGCCGCGCGGTCGTGGCCGGAGAAGTATATTCAAGAGACAACCGCTCAAAGCGCCTACAGCTACTGCCACGGTTGTAACTAGCGACTCTGTGTTTTATaagGGCACCTACATGCAAGTGGGTGATATAGTCTCTATGACAGACATTGACGGAGGCATATTCTACGCACAAATCCGAGGGTTCCTTACAGACCAGTACTGTGAGAAGAGTGCTGTGATCACATGGCTACTGCCCACAAAGGCAAGCCCACCTCCAGAAAAGCGTTTCGATCCTGCCACATATATTATTGGACCTGAAGAAGAACTAGCTCGTAAGCTTGACGTCATGGAGTTTGTAATGCACGCACCATCAGACTACTACAAAGTGGGTACCAGCCCATACCCTCTCACAGAGAATGAGGTCAATAACTACACAGGGTACATATGGACCTCCCTCGAGCCCAAGGAGAGAACTTag
Protein Sequence
MPKPICVQCNTNDSLLWRSGENGQICNDCHLANTAKDSKPESSIKVEGDEIKEEKEDSKNGRTEGESTPAKATGKGTRKSTRSTRYKAKTPAPTPSKTAAPRGRGRRSIFKRQPLKAPTATATVVTSDSVFYKGTYMQVGDIVSMTDIDGGIFYAQIRGFLTDQYCEKSAVITWLLPTKASPPPEKRFDPATYIIGPEEELARKLDVMEFVMHAPSDYYKVGTSPYPLTENEVNNYTGYIWTSLEPKERT*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01010953; iTF_00064138; iTF_00860061; iTF_01359392; iTF_00428673; iTF_00819726; iTF_00429564; iTF_00820607; iTF_01430431; iTF_00788195; iTF_00291203; iTF_01363605; iTF_01362182; iTF_01362761; iTF_00943393; iTF_00301762; iTF_01064295; iTF_01062416; iTF_01083906; iTF_01417385; iTF_00007667; iTF_01252414; iTF_01157347; iTF_01158407; iTF_01154700; iTF_00923289; iTF_01160157; iTF_01155966; iTF_01073252; iTF_00290337; iTF_00463041; iTF_00659139; iTF_00659971; iTF_01464709; iTF_00413158; iTF_00150151; iTF_00009676; iTF_00656813; iTF_00010769; iTF_01134450; iTF_00660947; iTF_00411061; iTF_00654998; iTF_00149048; iTF_00872024; iTF_00409945; iTF_00681337; iTF_00412186; iTF_00953190; iTF_01126023; iTF_01125106; iTF_01125107; iTF_00077160; iTF_01279848; iTF_00075126; iTF_00076121; iTF_01282975; iTF_01338154; iTF_00204804; iTF_00256523; iTF_00257474; iTF_00948427; iTF_00185807; iTF_00327530; iTF_00384241; iTF_01265458; iTF_01340818; iTF_01339612; iTF_00433716; iTF_00432806; iTF_01063412; iTF_00622486; iTF_01426369; iTF_01180824; iTF_01179998; iTF_00762230; iTF_00929238; iTF_00017847; iTF_01378051; iTF_00172404; iTF_00018686; iTF_01260663; iTF_00909423; iTF_01072114; iTF_01341888; iTF_00008569; iTF_00112185; iTF_01118900; iTF_01119902; iTF_01117920; iTF_00446777; iTF_00447828; iTF_00828441; iTF_01019097; iTF_01222137; iTF_01534457; iTF_01065219; iTF_00408954; iTF_00347877; iTF_00889787; iTF_01091356; iTF_00247709; iTF_00248600; iTF_00932093; iTF_00933258; iTF_00275935; iTF_00365439; iTF_01281887; iTF_01280970; iTF_00006752; iTF_00448684; iTF_01082092; iTF_00197792; iTF_00341886; iTF_00876702; iTF_00874984; iTF_00875833; iTF_01092738; iTF_00802502; iTF_00955272; iTF_00954073; iTF_01021895; iTF_01018252; iTF_00959086; iTF_00959842; iTF_01078734; iTF_01079527; iTF_01506840; iTF_01507739; iTF_01081212; iTF_01508540; iTF_00145215; iTF_00796991; iTF_01080384; iTF_01151731; iTF_00960597; iTF_00462039; iTF_01035127; iTF_01034206;
90% Identity
iTF_01010953; iTF_00064138; iTF_00860061; iTF_01359392;
80% Identity
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