Basic Information

Insect: Laothoe populi
Gene Symbol: -
Assembly: GCA_905220505.1
Location: HG992174.1:376058-405017[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.015 1.4 10.5 0.8 1 23 1262 1284 1262 1284 0.99

2 9 0.027 2.6 9.6 4.3 2 23 1292 1313 1291 1313 0.97

3 9 3 2.9e+02 3.2 4.2 3 23 1349 1369 1347 1369 0.95

4 9 8.8e-06 0.00083 20.6 1.8 2 23 1374 1395 1373 1395 0.96

5 9 0.00053 0.05 15.0 2.0 1 23 1401 1423 1401 1423 0.99

6 9 0.012 1.2 10.7 2.1 2 21 1430 1449 1429 1454 0.93

7 9 1.6 1.5e+02 4.1 0.3 1 21 1462 1482 1462 1485 0.78

8 9 1.5 1.4e+02 4.2 1.7 1 23 1491 1516 1491 1516 0.96

9 9 1.5e-05 0.0014 19.9 1.5 1 23 1525 1547 1525 1547 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.015	1.4	10.5	0.8	1	23	1262	1284	1262	1284	0.99
2	9	0.027	2.6	9.6	4.3	2	23	1292	1313	1291	1313	0.97
3	9	3	2.9e+02	3.2	4.2	3	23	1349	1369	1347	1369	0.95
4	9	8.8e-06	0.00083	20.6	1.8	2	23	1374	1395	1373	1395	0.96
5	9	0.00053	0.05	15.0	2.0	1	23	1401	1423	1401	1423	0.99
6	9	0.012	1.2	10.7	2.1	2	21	1430	1449	1429	1454	0.93
7	9	1.6	1.5e+02	4.1	0.3	1	21	1462	1482	1462	1485	0.78
8	9	1.5	1.4e+02	4.2	1.7	1	23	1491	1516	1491	1516	0.96
9	9	1.5e-05	0.0014	19.9	1.5	1	23	1525	1547	1525	1547	0.98

Sequence Information

Coding Sequence: ATGTTAAACCTTCAGTCTGTTGGAACCCAAACGCAGAAGAGAGAAGCCGGTGGTCTGTTGAATTCTTATGGGGAACCTCTCCCGGCCGACGCGTATGGACCTCCACGAGAGATATCTAACATAATTCCAGATTTTCAGCTGCCAGCGCCCATCTATGGAGTCCCTCTACCGAACGTACAAGAAACTCCACCAGGCGCCTACGGACCTCCGTCGCCCGTGGTCTTCCCCAACCAAAACTACGAAGGTCCACCGCCACCGATCAGCAAACCAAAGCCTTTATACGGACCGCCAAAGATTTACGGACCTCCTAAAAGTTACGGACCCCCAAAATACCACCAGAAATTTGTGTATGGACCACCGAAGAAATTATATGGACCGCCAAAGCAGAGTCTTCCAAAACCTACGTACGGGGTGCCTTTTAAAAGCCCTAAGGTATTATCAAAGCCGTTTGGGAAACCGGTGTATGGACCCCCAAAATTGAAGCCGATTTATGGACCACCCATTTCGAAGCCGATACCCCTGGAAGCCCCACCGCCAGCTCCGACTGTTACAACGATTGAGACTAGTGTTACCAACTTCGGGAATGTTGGGGCAAGTATCGGAAGCTTCCATGGAGGCAGTTTTGGGTCTAACGTTGGATCCAACATCGACCTGGGCTTAAACCTTCCAGCTCCAATATACGGCACACCACTAGTCTCTCTACCAGTGGATCTAAAACCTAACTATCCTCTACCTTCAGACACCTACGGGCCTCCAGGACACACATTGGGTCCAATAGGCCCTAATGATCAGATTGTGGTGCAAGATCTATCGAATATAGGACATTATGGGCCGCCTCAACCAGATCCCAACCCACGACCACCACATCCAGGCATACCAGCTCCGCCAACACCACCCCACGTGTTATACGACGGTTGGAAGCCAATCCCAGGTGTATCCCACCCAATAGGAAATATAGAAGAGACCATATTCACAAATATTGGTGTTGATAATTACGGCCCACCACCGCCACCGCCAGTTCAGGATGTCCATATAAATTTGGACCAACATAACATAAACTTCGATCAACATAACATAAACTTCGACCAACATAACATAAACTTCGACCAACATTTGTCAAGTCAAGTTGGTTTGAATCAGCATTTGTCAAGTCAATCTGGTTTGAACCAGCATTTGTCCAGCCAGATAGGTTTGGATCAATTGTCCAACGTGAACCAGATAGACCATCATTTGTCAAATCAGATCAGTTTCGATCAACATCTACCGAGTGTGAATCAAGTACAATCGTTCTCTAACGCCCAAATCGCGTCTGGATATTCCAATGTACACCAAGACGCTTTAGCCAATGTTGACTTAGGATCTATAGTCGGAGGTAATTCAAACCACATAGACCAGTCCAAGACTGTCTTCGAGGCGCATTACACTGAGAACCGCAATCCTCAAGCTAATTTAGCTTTCGTCCAATCAGCAATAACTTTAGACAAACCTTCAGAGTCTTATGGTACTCCTTTGGATGTTGTCTCTTTCCCTGGCTCTATAAGGCAGCAAGGGGCTAAGGGACTCATCCCCCCTTCAGGGGTATACGGAGTCCCTCCTGGCAGTCAATATGGTGCCCCACCAAAACCTCCTCCAGCGAACCTTCCAATCCCTTACGGTTCTTTCTCAGGCGGAGGTCACTCAATCCATACCGGTGGAAATACTCCGAAACACCCAATCAAGTTCAGGGAATCAGTTCCTGAAGGGTTATTGGAACATGTAGGTCAAACAACTCACGGTAAAGACACTCATGGAATAGACCATTTGACACAAGGACCAGCGTATCTCCCCCCACCGATCAGAGATGCTAAGGACGTTAGTCAACACACGTCTTTGGGTATAAACTTATCTATAGAACCTTCTAGTCTCTACAGCTTACCCCACGCAGGCAACCCTTTGAATTTCCAAGCACCACAACCTAGTAACTTATATGGATCCCCTATAGATTCTTATTCAGCTCCTCTTCTCACTGTGGGAGACCACACAGCGTCTGGTTCTTCAAATGCTGCAGTTACTACTACAATAGACGGATCTATTTTGGCTAATCTTTCTAATTTGGACGCTGCAGCGATCCTAAAACACTGTCCGTATCATGAAGCTATACTTAAAGCAGCTAAATATGGAGAGAAAATTCCGGTCGAATTGGCAAATAAATACATGGCTAGCTTAAACTCTTTAGGCAATCATTTAGCTAAAAATCAAAATGTTGTATTCAAAGATCAATCTACATCACAAACTGTAGTGCAAAATGTCAAAGAGCAAAAGGCTAAATCGATAAGAAATGCGGACGTAGATATCAAAAAAGAGAAACTCCAGTACGTCTCGGATCAAATTTTGAAAACATCTGAAAAGATTCGTAGCTTAAACGAGGAAACTAAACATTTACAACAAAAATTGGCATCGAGCCAACgcaatttgaataatattaatcaatatgAACATTTGAAAGTACCCTCTTATTCCGTACAGATAGAATCATCAAATAGTGGAAATAAGGCAAACCCGGCTATTCCACACGACCAGTTGCTCTCTGAAGGCTTGCTTCAAAGTATCCTACAAGCCATAGAACAACCAGGCCCTAACCAGAGTAAAGTTAACCAAGTACAATACCCTCAGCCTGTCTACAATGACGGTTTAGTCCTTCCAGCCGGATACGAACCCATAGACCGGACTAAAAATACAGATTTGGCCACACAAAGCTCGGAAATTGTGAAAAATGTCGCTGATTGTGATTTGAAAGCTGAAGGATCTGTCACACATGAGGTGGTAGTGGCTCCGCCTATAGATAAAGTAAATCCAGTGGATGAGGTGAATGATAATGAAGTAGCGATTTTCTTTGATAAGGAGAAAGAACCGGACAACTTCAATAAACCAGTATCACTTTGTTGGGAATGCTTCGCTTTAGTACAAAAAACTGTACAATTTAAGAAACAAGTTAAATATGCAAAGGATTATCTTCTCACATGTTTGtataaTCATAATCCTACACCAACTTTatccaaattaaaaataagagaAACCCATCATCTAGATATAATTGAAGACTTAGGTCCTAAAAAAAGAAAGACTCGAAAATCCAAACTTAAACATACTCAATGCAACAAATCTCAAATAGTTAAAACTGATATTGTAGTAAGTGATTTAgatttaatagaaaatataaaagactCATCCATCCATGATGAGTCTATTGAACAAAATAATGACTCTATCCAAAATGAATGCGAAGATGTCAAAGTTGACACAAAAAATGACTCGTTTGTccaaaaatacgagttttgtTACACATTCCCTGATATGTTTGTCAAAACTGAAGACTCGAATGGTATGGATATGGATGTCGAAGGATACTTTAATGATGAAAATGTGGATAATGAAGAAATGGAGAGTATTAAGGAAATCGAAAAAGTGGATGTGAGTGACTCAAATGCTAAGCCAAAGAGGACGAAGCGCAAACAAGACGTGACGTACGAGGACTCAGATGACGAACCCCTAGTGAAGAAGAGTGGgaagaaaagtaaaaaaaaagtgaaagaGAAAAATTcgtCACCCAAAATCGACCTTCGTAAAAACCCAGGACCCAAGCGAGAGAAGCCAGCTGGCGTGGTCAACAACCCCAGGGTGGCGAGGAAACTCCAGGAGTTGAACGTGGCCACTGACCAGCTCGAGATGGTGCTCCTGAGTTGGGAAGAGGTGGAGGAGGAGCGACAGAGATCCCTCCAGAGTGAGACGTTCACCCGCCATGAGTACAGGTGCTATGACTGCGTGTTGGGGTTCAACTATAGAGTCAAACTAGACAACCACATGCTGAAACACCAACCGTCTGCAGGTGATCTAGTATGCGAGGTGTGTAAGATCCACTGCAAGAATGCACACGCGCTGTCGGCACACAGGCGGAGGCACCGGGTCAGaTGGCGGTGTGTGTTGTGTGGCGGATGGTGGTCCCGTGCGGCGGTGGCGGCCGACCACCACGCGAGACACCACGGCGCTCCGCCCCCCACGCATCTCTGTACCACGTGCGGACACACTGAGACAAGCCTGGGTCGTCTGCGTAACCACATGAAGAACCACTCTGAGAGACAAAAGTGCGAGCTGTGTGACAAAACGTTCAGGAACAAGGACTCGTTGCGGACGCACTTGTTCATCCATAGGGGTGAGAAGGAATACCAATGTCCTAAATGTGGCAAGAGGTTCTTGTTCAAGCGAGCGCTCCATGTGCACCTCATCACACATGACGCGCCCGCGCTGCTCTACTGCCACGAGTGTGACATGAACTTCAAGAACCGTATGTCATACGGTCAGCACATGCGATACAGCCTCAAGCACATCGACCCGGCCAAACTCAAACACGCGTGCTCTCTGTGCGACAAGCGGTTTCTGAAAGCGGCTCGTCTGGAGGAACACAACATGGCGGTGCATCTCAAGACCACGCCGTTCCACTGCACCGTACAAGGATGTCATTTCGCGAGCTCCTCCCGGCCCGTCCTGCGGTCCCACGTGCGGATGGTCCACAGGAATGGACGCGCGCGCAGGAACTACGTGTGCCACACCTGTGGGAAGGCCTACAAGAATAAGAAGACCCTAGAAGGTCACCTGCGCGCCCACTCCGGCGAGAGACCTCTCCGCTGCGGCGCGTGTCCCGCCACCTTCGGGTACGACGCCGCCCTCTACAACCACAACAGACTCGTGCATCTCAACCAGAAGAGTACTCTAATACAGTACCCATGTGCCATAGAATGTCCTGGTACCATAGAGTACCCTGGTGCCACAAGGTACCGTAGTATAACAGAGTACTCCGGTATAACTGAGTATTCCGCTACAACAGAGTTCCCCAGTACAGCAAAGATCCCCGGTACAACAGAGTACCTTGGTGCCACAAGGTATCTTCGTATAACAGAGTACTCTGGTACAACAAAGTTTCCCGGTACAACAGAGTACCCCGGTACCACAGTATACCTAAGTACTATTCACAACACACTCACTTTAAAATTATAA
Protein Sequence: MLNLQSVGTQTQKREAGGLLNSYGEPLPADAYGPPREISNIIPDFQLPAPIYGVPLPNVQETPPGAYGPPSPVVFPNQNYEGPPPPISKPKPLYGPPKIYGPPKSYGPPKYHQKFVYGPPKKLYGPPKQSLPKPTYGVPFKSPKVLSKPFGKPVYGPPKLKPIYGPPISKPIPLEAPPPAPTVTTIETSVTNFGNVGASIGSFHGGSFGSNVGSNIDLGLNLPAPIYGTPLVSLPVDLKPNYPLPSDTYGPPGHTLGPIGPNDQIVVQDLSNIGHYGPPQPDPNPRPPHPGIPAPPTPPHVLYDGWKPIPGVSHPIGNIEETIFTNIGVDNYGPPPPPPVQDVHINLDQHNINFDQHNINFDQHNINFDQHLSSQVGLNQHLSSQSGLNQHLSSQIGLDQLSNVNQIDHHLSNQISFDQHLPSVNQVQSFSNAQIASGYSNVHQDALANVDLGSIVGGNSNHIDQSKTVFEAHYTENRNPQANLAFVQSAITLDKPSESYGTPLDVVSFPGSIRQQGAKGLIPPSGVYGVPPGSQYGAPPKPPPANLPIPYGSFSGGGHSIHTGGNTPKHPIKFRESVPEGLLEHVGQTTHGKDTHGIDHLTQGPAYLPPPIRDAKDVSQHTSLGINLSIEPSSLYSLPHAGNPLNFQAPQPSNLYGSPIDSYSAPLLTVGDHTASGSSNAAVTTTIDGSILANLSNLDAAAILKHCPYHEAILKAAKYGEKIPVELANKYMASLNSLGNHLAKNQNVVFKDQSTSQTVVQNVKEQKAKSIRNADVDIKKEKLQYVSDQILKTSEKIRSLNEETKHLQQKLASSQRNLNNINQYEHLKVPSYSVQIESSNSGNKANPAIPHDQLLSEGLLQSILQAIEQPGPNQSKVNQVQYPQPVYNDGLVLPAGYEPIDRTKNTDLATQSSEIVKNVADCDLKAEGSVTHEVVVAPPIDKVNPVDEVNDNEVAIFFDKEKEPDNFNKPVSLCWECFALVQKTVQFKKQVKYAKDYLLTCLYNHNPTPTLSKLKIRETHHLDIIEDLGPKKRKTRKSKLKHTQCNKSQIVKTDIVVSDLDLIENIKDSSIHDESIEQNNDSIQNECEDVKVDTKNDSFVQKYEFCYTFPDMFVKTEDSNGMDMDVEGYFNDENVDNEEMESIKEIEKVDVSDSNAKPKRTKRKQDVTYEDSDDEPLVKKSGKKSKKKVKEKNSSPKIDLRKNPGPKREKPAGVVNNPRVARKLQELNVATDQLEMVLLSWEEVEEERQRSLQSETFTRHEYRCYDCVLGFNYRVKLDNHMLKHQPSAGDLVCEVCKIHCKNAHALSAHRRRHRVRWRCVLCGGWWSRAAVAADHHARHHGAPPPTHLCTTCGHTETSLGRLRNHMKNHSERQKCELCDKTFRNKDSLRTHLFIHRGEKEYQCPKCGKRFLFKRALHVHLITHDAPALLYCHECDMNFKNRMSYGQHMRYSLKHIDPAKLKHACSLCDKRFLKAARLEEHNMAVHLKTTPFHCTVQGCHFASSSRPVLRSHVRMVHRNGRARRNYVCHTCGKAYKNKKTLEGHLRAHSGERPLRCGACPATFGYDAALYNHNRLVHLNQKSTLIQYPCAIECPGTIEYPGATRYRSITEYSGITEYSATTEFPSTAKIPGTTEYLGATRYLRITEYSGTTKFPGTTEYPGTTVYLSTIHNTLTLKL*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -