Lpop000062.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Laothoe populi
Gene Symbol
ZFY
Assembly
GCA_905220505.1
Location
HG992146.1:332674-340927[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 35 0.0026 0.24 12.9 1.3 2 21 164 183 163 184 0.93
2 35 0.037 3.5 9.2 1.4 1 23 217 240 217 240 0.96
3 35 0.074 7 8.3 2.9 2 23 246 267 245 267 0.95
4 35 2.3 2.2e+02 3.6 4.7 3 21 272 290 271 291 0.93
5 35 0.0035 0.33 12.4 0.9 2 23 333 355 332 355 0.95
6 35 0.012 1.2 10.7 0.6 1 23 388 410 388 410 0.98
7 35 0.0038 0.36 12.3 2.0 1 23 416 439 416 439 0.97
8 35 0.0098 0.93 11.0 2.2 1 23 448 471 448 471 0.95
9 35 0.057 5.4 8.6 0.2 2 21 621 640 620 641 0.94
10 35 0.39 37 6.0 0.6 1 23 671 693 671 693 0.96
11 35 0.013 1.2 10.7 0.2 2 23 698 719 697 719 0.94
12 35 0.0025 0.24 12.9 2.2 3 21 724 742 723 743 0.94
13 35 0.02 1.8 10.1 0.7 1 23 753 776 753 776 0.94
14 35 0.00012 0.011 17.1 1.1 1 23 782 804 782 804 0.98
15 35 0.051 4.8 8.8 4.3 1 23 811 833 811 833 0.98
16 35 8.3 7.8e+02 1.8 0.3 1 9 850 858 850 860 0.91
17 35 0.036 3.4 9.3 2.8 2 20 967 985 966 987 0.85
18 35 1.5 1.4e+02 4.2 0.9 3 23 993 1013 992 1013 0.93
19 35 0.019 1.8 10.1 0.2 2 23 1019 1041 1018 1041 0.93
20 35 0.047 4.4 8.9 6.1 1 23 1046 1068 1046 1068 0.97
21 35 2.6 2.4e+02 3.4 7.2 1 21 1071 1091 1071 1092 0.95
22 35 0.0016 0.15 13.5 0.3 1 23 1104 1127 1104 1127 0.95
23 35 2.5e-05 0.0024 19.2 1.5 1 23 1133 1155 1133 1155 0.98
24 35 8.1 7.7e+02 1.9 0.5 1 23 1189 1212 1189 1212 0.87
25 35 0.0012 0.11 13.9 1.8 1 23 1220 1243 1220 1243 0.95
26 35 0.00027 0.025 16.0 1.1 2 21 1355 1374 1354 1375 0.93
27 35 1.1 1.1e+02 4.6 0.1 3 23 1382 1403 1381 1403 0.95
28 35 0.0052 0.49 11.9 0.6 3 23 1410 1431 1409 1431 0.97
29 35 0.00033 0.031 15.7 0.9 2 23 1437 1458 1436 1458 0.97
30 35 1 97 4.7 1.2 2 20 1462 1480 1462 1482 0.93
31 35 1.8e-06 0.00017 22.8 0.4 1 23 1508 1531 1508 1531 0.95
32 35 0.00075 0.071 14.6 0.5 1 23 1537 1559 1537 1559 0.95
33 35 0.13 12 7.5 0.1 1 23 1565 1587 1565 1587 0.97
34 35 0.0066 0.62 11.6 0.5 1 23 1593 1616 1593 1616 0.94
35 35 0.00069 0.065 14.7 0.9 2 23 1623 1645 1622 1645 0.96

Sequence Information

Coding Sequence
ATGACCCGACAAGTGGATGTGAAGGCATTAGTCTCCCATATAGTCCGAGGTGATGGCGTGGACAAATGTCGGATTTGTATGGGCGATACTACCGAGGGTCAAGTTTTCCTTGGCGACACAGTAATGATGGACGGAGACAAAGCGGTGACCCTCGCTGAGCTTTTAGAACTTATCACAGGAGTAGAGGTGGCCGAGGATGTTGACCTGCCCAACGGACTGTGCAGAACATGCTCAGCATCTGTATTTAAAGCTGCTGAGTTCCGGACATTCTGTCGTCAAGCCACCACACACTGGATTACTATACTAGATATGCTTAACATGATACCAAAGAATAAACTCATTCATAAATCAACAAATATATATGCATTGTTATCGGAAAACAAAATATCCATACATGACAGTAAGCTCTTCAAAtatacggagaaggcaaaagaGCCGTATCCTAAagtgaaaacaataaaacgtaataatttaaaaagcttGCGGTGTCAATGTGTCAATTGTGGGAAAAAGTTTATCTATGCATATGACCTGCATGTTCATTTAAAGGAGTCCATGGATTTGGTCCAAGCTTGTTATATTTGTGCAAAAATTATGAATAGAGAGGAACTGATCAAACATTTGATCGAAGAACACTACAAGAAGCCACATCCGTGCAAGAAATGTCCAACATTATTGAATTCTCTTGATCAATATAAGCAGCATATGATGAAGGCACATGGTCCAGGGGTGTGTACTTGTGGAGATTGTGCACGAACATTCCAATCCAAACATGCCTACTATGCCCATCTGTCCATACACACACCTAAAAACTGCCCCCGATGTTCTAAACTATTCCGTAACAAAAGATGTTACGTGCATCATGTAAAGAAGTGCTGTGACTTGCACAAAAATAGGAAGGAAGTGCATCAAACTAAACACAAATTGTCCGTACTAGTTAAAAACAAAGACAAACAGGTTAAAGTGGGTCTCCGAGGAAGTGCTGATAAGGAATGCATATGTGACTACTGCAACAAACGGTTTTCAGGAAAGAAGTTTGTAGCGGCACACATTCAAatagtacatttaaaaaatacacacagACCATGTGCATACTGTGGGAAACTGCTTGCAGCAGCGCGCATGTCATCGCATTTGAAAAAGCACCAGCCATCGAAGAGTTACATTTGTGGGCATTGTGGCATCGTACTAAAGACTAAGCTAGGATACAGCCAGCACTTGCGTCTCCACACTGGCGAACGACCGTATGTGTGCCAACATTGTGGAGAGACATTTACCGCTTCTTCTAGAAAATCCGAACATATCCGCAGAACGCACAAGGACACAGAACAGTTGCTGCGTCACGCTTGTCAACACTGTCCGGCGAGGTTTCGCCTTCCGTACAGGTTGAAAAAACACGTCTTAACAGTTCATAGTAAGACGAAAGCACTTTTGTATGAGTGTAACAGCTGTGAGGTGGAGACGAGCTCAGTGCTGCCAAATAAATTGTGCATGCAATGCATGGCGCACATAACCACCTTCCTACCGTTCCTGCTTCTGTGCAGGGAATCGTCTCAGCGGTGGGACCAAATCACAAAAATGTTTGACGAAACCAAAGTCTCTAAGAAAACTCAAAGTATTTACGTCTTAGTCCTGAAAGATATACGGGCTTACTCCAGTGCTAAAACAGCTGCAAACAAAACCGAGGCGTTAGACAATTTAAAAACTAATGTGTCGTACAAGAAGTTCTATACTAAAATAGCTGCAAACAAAAACGACACGTTAGACAATTTAAAAACTAATGTATCTTACAAGAAGTGTTATAATCAACGAATAGCAAAAGAGAACCAGGTGGGTCGTATGCGAAAATCGCCAAATATGACTTGTCCCGAATGCGAAACAACGTATTCAGTAATTACAAAATTcaacaaacatataaaaaatgcgAGAAAGATAATGTGCGTTCTGTGCCATACGTTGTTGGACATAGATGCATACAAGGCACATCTGAACAATCACTCTGTTACAGTTTTTGCTTGTAAATCATGCCCTGAAGCATTTTTAAAAGAACAATCCTTGAATAACCATAGATCAAAACACAAAGGACACCAAGTATGTGTCGATTGCAATCACAGTTTTGTCACGTCTGCTCGCCTCGCCGCACACTTAGTAAACCATCAGTCTGAAATATGTCCAGGATGTGATAAAAAGTTTAGTAATAGGATATGCTATACAAAGCATAGACAAAAATGCTTGAACGTAGaaaataagaaattatacaTCTGCGACTATTGCTCAAAAGAATTCAACAAAatgaacccattaaaatatcACATTATAAACAATCATTTGACGAGAAAGCAGTTCCAATGTGACCAATGTGGAAGGACTTTTATGAGCCGCATACATTTGGCCGAACATGGCAACACTCACAACAAAATCCTAGATCGATATGTATGCACCAAGTGTGGAAGCAAGTTCAGTACCAGGCGAGGTCACGAGCGACATTTAAAAAAGCACGACACGACAAGTGCCACTTCCGACTCTAAGCCGAGAAAGAAGACCAAATATATCTGCCCGATCTGTAAGAAGGTGGGAGAGGAGCCCGCGCTGCCGCAGGGGCTGTGCAGGACCTGTTCCGAGCAGACCATGGCCGCCTACCGCTTCAGGCAGCTTTGTCAACAGTCCAACCAGCACTGGAGAGATGGCACTGTCTGTCTCGCTCAAATCCACACGCCCACAGACGACGACAAAACATTCTACGTGCTCTATAATGGTCATATGATGATTATAAAGGACCAGGTCAATCGAGTGCCGAACGAGTCAGAGGCTCTGAAGAAACTCAACCACAGATTTAAAGATCCTGAGCCTGACAAACCGCCGAGGAGAACGAAACGGTCGTTCGCGCCGATCAGTTGTTACTGTTCAGACTGCGGGAAGACGTTTTCAAATACGGAATTCCTCAACTTTCATCTGAAGAATTCGTTGAAACGTGCTTGTCACGTGTGCGGGGTCGTTTTGCTGAAAAAGAACTTATCAAAACACTTGCAAGATAAACATGACGCGCGGATGCTTGAATGCAGTACATGTCACGGCGTCTTTGATACTCAACAGCAATTAGAAGAACACTGGATCATCTCCCACGGCCCCGATACATACTCCTGCCATTGCTGTGGCACTGGCTTCAATAACCACAGGGCTCTGCGTGCCCATATGTACTCCCACACGCTGTTCCATTGCAAAGCTTGTGGAAACAGCTTCGACAACCGCAAATGCTACAAACACCATCAAAAACAGTGCAAGAAAACAGATGAGCCACAGGAGGAGTTATACATTTGTGATTACTGCAAAATAGAGTATAATAGAAAGCCGTCACTGCGAATCCATATAATTCAGAAACATCTGAATGTCAATCCTTTCGTTTGCCAAGTTTGTGGTAAAAGGGCTTCGACGATGGCGCACTTGAAATCTCACATGAAGACGCATAGTGCGGCGCGTAGTGTTTTCCAATGCCATTGCGGTGCTAAGATGCGCACTGAGGTCGGATATCAACTTCACCAGCGTATACATTCAGGGGAGAGGCCTTACGAGTGTGACACTTGTGGTGATCGGTTTCTGTCCGCGTCGCGTCGCCTCGATCACATAAAACGAAGGCACCGCAATTCTGGTGTTATGCCGCACGCCTGCCACAAGTGCTCTGCGTCTTACATCAGGCCCTGGGAATTAAGGAAGCATTATTTGACTGTACATAATGACATAAAGGAAGAGTCTCTATGTCCGAACAGCGCATGCGTGGCGTGCGCCAGCACGGCCCTGGCCGCGCAGGAGTTCCGCTACTTCGTGCAGTCCTCGGAGAAAATGTGGGGGAAAGCCATCACCAACCTATCAGGCCTGCCCACTTCCACCATGTCTTCCCCACTAAAGTCGCTCTGTGTTTTGGTGACCCCAAACGACATGCGCATACAGACAGTGAAAAACTACGTTAGTGGTGACTCTAAAACCTTCTTAAATAAACTCAAAACCGGGATTAGTAGAAAGCCTTTTGGTCGCAAACCTCGTACTGACCGCACTGGCCCCTCGTGCGTCTGTCCGGATTGTAACAAAAGCTTTGTTAGCCCACATTTCCTAAACCTCCACCTCATGAACAGCGGGCAGAAGGAAGCCTGTGTACTATGCGGCGACGTAGTGTCTCGCGGCCAGCAAATGAAAGAACACATGCGCAGAGCACACCGGACCGACCTGCTGCTCTGCACCGACTGCCCGCTGCTCTTCCCCACAGAAGAAGAGTTGAAGAAGCACATAAAACATTATCACAAACCTGGCTGTTTGACGTGTGGTGAATGTGGCAGGAGTTTCCCGAGAAAAGTAGCGTTCGATCACCACACCCAGATGCACATGGTGAGGACTTGTCGCAGCTGTGGCGCGCAATTCACGAACCGAGGTTGTTACAGAGAACATAGGATACAGTGCGAACCGGATGCCAAGCCTAGTGCGGACAGTGTCCCGCGAGCGCGTCGGTCGAACATACGAGATCCGGCGACATACACGTGCGACTACTGCGGCAAAACGTACACCTCGCGGCCGCAGCTCAAAAACCACATCCTGTGGATACACATGGATGTTCGCCCTCACCAGTGCCAATGGTGTGGGAAGCGGTTTTACACCCCGGCGCGTCTTGCTGAGCATACTGTTGTGCATACACGTGTAAGGAACTTCGAATGTGACATATGTGGTGCTAAATTAGTAACTAAAATGGCCGCCATATACCACAAAAGGAGACACACGGGCGAGCGACCTTACAAATGTGAAGACTGTGGTGAAGGGTTCATATCGTCTTCGCGGAGGTCTGAGCACGCCAAGCGGAAGCACAACAGGGGCCTGAAACTACAGTGCCAATACTGTCCGTCCACTTTTGTCCGGAAACAAGAGTTGTTGAACCACAGAATGAAGCTACACATGCCTGAACTGGTCTTTGAAAATGTTGATCGtatagaaattaaaaagaataataCACCGAGGACGTATTAG
Protein Sequence
MTRQVDVKALVSHIVRGDGVDKCRICMGDTTEGQVFLGDTVMMDGDKAVTLAELLELITGVEVAEDVDLPNGLCRTCSASVFKAAEFRTFCRQATTHWITILDMLNMIPKNKLIHKSTNIYALLSENKISIHDSKLFKYTEKAKEPYPKVKTIKRNNLKSLRCQCVNCGKKFIYAYDLHVHLKESMDLVQACYICAKIMNREELIKHLIEEHYKKPHPCKKCPTLLNSLDQYKQHMMKAHGPGVCTCGDCARTFQSKHAYYAHLSIHTPKNCPRCSKLFRNKRCYVHHVKKCCDLHKNRKEVHQTKHKLSVLVKNKDKQVKVGLRGSADKECICDYCNKRFSGKKFVAAHIQIVHLKNTHRPCAYCGKLLAAARMSSHLKKHQPSKSYICGHCGIVLKTKLGYSQHLRLHTGERPYVCQHCGETFTASSRKSEHIRRTHKDTEQLLRHACQHCPARFRLPYRLKKHVLTVHSKTKALLYECNSCEVETSSVLPNKLCMQCMAHITTFLPFLLLCRESSQRWDQITKMFDETKVSKKTQSIYVLVLKDIRAYSSAKTAANKTEALDNLKTNVSYKKFYTKIAANKNDTLDNLKTNVSYKKCYNQRIAKENQVGRMRKSPNMTCPECETTYSVITKFNKHIKNARKIMCVLCHTLLDIDAYKAHLNNHSVTVFACKSCPEAFLKEQSLNNHRSKHKGHQVCVDCNHSFVTSARLAAHLVNHQSEICPGCDKKFSNRICYTKHRQKCLNVENKKLYICDYCSKEFNKMNPLKYHIINNHLTRKQFQCDQCGRTFMSRIHLAEHGNTHNKILDRYVCTKCGSKFSTRRGHERHLKKHDTTSATSDSKPRKKTKYICPICKKVGEEPALPQGLCRTCSEQTMAAYRFRQLCQQSNQHWRDGTVCLAQIHTPTDDDKTFYVLYNGHMMIIKDQVNRVPNESEALKKLNHRFKDPEPDKPPRRTKRSFAPISCYCSDCGKTFSNTEFLNFHLKNSLKRACHVCGVVLLKKNLSKHLQDKHDARMLECSTCHGVFDTQQQLEEHWIISHGPDTYSCHCCGTGFNNHRALRAHMYSHTLFHCKACGNSFDNRKCYKHHQKQCKKTDEPQEELYICDYCKIEYNRKPSLRIHIIQKHLNVNPFVCQVCGKRASTMAHLKSHMKTHSAARSVFQCHCGAKMRTEVGYQLHQRIHSGERPYECDTCGDRFLSASRRLDHIKRRHRNSGVMPHACHKCSASYIRPWELRKHYLTVHNDIKEESLCPNSACVACASTALAAQEFRYFVQSSEKMWGKAITNLSGLPTSTMSSPLKSLCVLVTPNDMRIQTVKNYVSGDSKTFLNKLKTGISRKPFGRKPRTDRTGPSCVCPDCNKSFVSPHFLNLHLMNSGQKEACVLCGDVVSRGQQMKEHMRRAHRTDLLLCTDCPLLFPTEEELKKHIKHYHKPGCLTCGECGRSFPRKVAFDHHTQMHMVRTCRSCGAQFTNRGCYREHRIQCEPDAKPSADSVPRARRSNIRDPATYTCDYCGKTYTSRPQLKNHILWIHMDVRPHQCQWCGKRFYTPARLAEHTVVHTRVRNFECDICGAKLVTKMAAIYHKRRHTGERPYKCEDCGEGFISSSRRSEHAKRKHNRGLKLQCQYCPSTFVRKQELLNHRMKLHMPELVFENVDRIEIKKNNTPRTY*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-