Lpop025831.1
Basic Information
- Insect
- Laothoe populi
- Gene Symbol
- NCOR2
- Assembly
- GCA_905220505.1
- Location
- HG992167.1:2665367-2710673[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.8e-09 9.7e-06 26.6 0.0 1 43 446 488 446 490 0.97
Sequence Information
- Coding Sequence
- ATGATTCAACGGTACGGAATATCTCCCACGCGAGGTAACTGCACACTAGCTGGACGGAAAGTGaaGCCCGGGCAAACGGATCACGGGcacggcggcggcggcgcgctGGCGTACGGCGGCAAGCCGGCGGGGGCTGTGGTGGCGGGCCCGCAGCCCCGGCCGCCGCCGGCCGCGCCCTACGCCCCGCAGCCCTACCCGCAGGCGCAGCTGCGGCTCCACCAGCCAGGATATGGCTCCGCCGCGCTGTCTTATAGGGACGGCAGTTACGCGCGCGGCGGCGGCGGGGGCGGGGGCGCTGCGGGCGCGGTGGGTGAGTACCGCGGCGTTGGCATCGGCGTCGGTGGTCGCATGTCGCTGCTCGGCGGCGGGTACCTCCCCGCGCCCACCGCACACCACCCGCCCCCCGCCGACCCCCCGCCCTTCAAGAAGATCCGCCTCGCCGCCGAACGTCCTCCGATCACGCAGCTGCCTCATCATCAGCCGCTCAGGGTCGATACCAGGGATTCGGTGAATACATACAACACTGTGGAGGTACTGTCTCCCAACCCGCCTTCAGAACAAACGATAGAGGACCAGAGCCTGAGGACGACCAAGGATGATCTCCTGCAACAGATATCGAAGGTGGACCGAGAGATGGCGTTGGCTGAGAACACGCTAAACCAGCTAAAGAAGAAGCAAGAGGAGTTGGAGAAGTCAGCCTCGAACCCAGCACGAGCGGAAGAGCCTGAAGAGGCACCTCCCCGGCACAGGAGCCTGGCACACTGTATATACGCTGAGAATAGGAAGAAGGCGGCGACGGCTCACGGCGTGTTAGCGAACCTCGGACCGGAAGTGTTATACCCTTTATATAACCAGCCACAGGACACGGAAGTGTATCACGAGAACATAAGGAGGCATCGAGTGTTCCGCAAGAAACTTGTCGAGCACATAAGGAGGATAAAGGCTGAGACTGAAAagCGGGAAGACGCGTTAGCAGAAGAGTACAGTAGAAGAGCAGCAGAGTGGGCGCGGAGAGTGGAGCGGATAGAACAGAGTCAAAAGAGGAAAGCGAAAGACGCCAAGAATAGAGAGTTCTTCGAAAagGTGTTTCCGGAACTCCGTAAGCAGCGTGAGGAACGGGAGCGGTTCAACCGTCTCGGGGCCAGGGTGAAGTCTGAAGCGGAACTAGAGGAGATCGCTGACGGTCTTCATGAACAGGAGCATGAGGATAAGAAGATGCGCGCTCTGACGGTGGTGCCGCCGCTGTTGCGGGACCCGAACGACACGCGCCCCCTGTACAAGGACACCAACAGACGGTGCATGGACATGAAGGCGGAACACAAGGAGCTACAGTTGAGGAACGTGTGGTCCCAATCGGAGCGGGAGATCTTCAGGGAGAAGTACCTCCAGCATCCGAAGAACTTCGGCACCATCGCATCCTTCCTGCCCAGGAAGAGTGTCAGGGACTGTGTTAGATTTTACTACCTGTCGAAAAAAGCGGAGAACTACAAGCAGGTGTTGCGCAAGCCGCGCGCGCGCCGCTCCGCACGGAACCCGGCGCGGGCACCGGCCGAGCCGGACCTGCCGCCGGGGGTCACCACGCGGCTGCAGAGGTCGCAAGGCACGACGGGTCGGTGTTCGGAGACGAAGGAGCCGACGGCGGAGGAGGTGGCCGCTGGTGCCGGTGTGGGTGGTGCGGGGGGCGGCGGGGGGTCGTCCCCCGCACCCGCGCCGCCTCCAGCCGCGCCTGAGCCTGCGTGTGTGCCGCTACCTCCCGCCGCACCTGGGACCTTCAGGCCAGAGCTGACCCGGACCCCGCCCCTCCCGCCGTCGCCCCCTCCGGCGTCGTCAGCGCCCCTGGGTCCAGTGACGTCATCAGTGTCTTCGATCAGCATGCCCCCGGGCAGCCCGGCGCCGATGGTACCGCCCCTGCCCCCGACGCCGCCTGCCACCATCTCCCTGCTGGATATAGCGCTGCCGCCTGGCACTGGGGAGTCCACGGTCACTATTACTGCTATTACTGTGTCATCGGCGGGCAGTACGTCGTTGCCGCCGTCGAGTTCGACGCCGACGTCGAGTGCGACGTCGAGTGCAACGTCGAGTGCAACGTCGAGTGGTTGTGTGACGGTGACGGCCGCCGTGTCGACGTCGAGCGCGCCGCCGACGCCGCAGCCGGCACAGCCGCCGACGCCGACGCAGCCCCCTCCCACACCTGAAGCTGGTGAGTTTACATCTCTTACAGCTTCTATGGAGTTCACTAGTGGAAATGTGGTCTCCAGGTTTGATGACAGACAATGGTTCGTGTGA
- Protein Sequence
- MIQRYGISPTRGNCTLAGRKVKPGQTDHGHGGGGALAYGGKPAGAVVAGPQPRPPPAAPYAPQPYPQAQLRLHQPGYGSAALSYRDGSYARGGGGGGGAAGAVGEYRGVGIGVGGRMSLLGGGYLPAPTAHHPPPADPPPFKKIRLAAERPPITQLPHHQPLRVDTRDSVNTYNTVEVLSPNPPSEQTIEDQSLRTTKDDLLQQISKVDREMALAENTLNQLKKKQEELEKSASNPARAEEPEEAPPRHRSLAHCIYAENRKKAATAHGVLANLGPEVLYPLYNQPQDTEVYHENIRRHRVFRKKLVEHIRRIKAETEKREDALAEEYSRRAAEWARRVERIEQSQKRKAKDAKNREFFEKVFPELRKQREERERFNRLGARVKSEAELEEIADGLHEQEHEDKKMRALTVVPPLLRDPNDTRPLYKDTNRRCMDMKAEHKELQLRNVWSQSEREIFREKYLQHPKNFGTIASFLPRKSVRDCVRFYYLSKKAENYKQVLRKPRARRSARNPARAPAEPDLPPGVTTRLQRSQGTTGRCSETKEPTAEEVAAGAGVGGAGGGGGSSPAPAPPPAAPEPACVPLPPAAPGTFRPELTRTPPLPPSPPPASSAPLGPVTSSVSSISMPPGSPAPMVPPLPPTPPATISLLDIALPPGTGESTVTITAITVSSAGSTSLPPSSSTPTSSATSSATSSATSSGCVTVTAAVSTSSAPPTPQPAQPPTPTQPPPTPEAGEFTSLTASMEFTSGNVVSRFDDRQWFV*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00428965; iTF_00428075; iTF_00819121; iTF_01010322; iTF_01358834; iTF_00063544; iTF_00859418; iTF_00787612; iTF_00290656; iTF_00341280;
- 90% Identity
- iTF_01358834; iTF_00063544; iTF_00859418;
- 80% Identity
- -