Lpop023696.1
Basic Information
- Insect
- Laothoe populi
- Gene Symbol
- dnajc2
- Assembly
- GCA_905220505.1
- Location
- HG992165.1:404014-406927[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.2e-06 0.012 16.7 0.0 3 31 434 466 434 469 0.87 2 2 6.8e-14 9.8e-11 42.6 0.3 2 44 555 601 554 603 0.92
Sequence Information
- Coding Sequence
- ATGACGGACGCAGGCTTGTGTAATAATAGACGAGTGGTAGCGATACCATGGCCGATAGTAAAAAAGAAAGTGGAATGTGCAGGCGCGCCGTTCCTCAgatattatagtataaaatgTCACGGAGACGATGCTCTACTTAGCACGTCCAAAGCGAACGAAAAAGCCGAAGAGGTGGTCTTCGACGACGATGTGGACTACCTGCGGAGCTTGGATCCTAAAGACTGGAAGATGCAGGATCACTACGCCGTGCTGGGTATGAAAAATCTTCGTTACAAGGCCACTGATGATGATATCAAACGCGCGTACCGGCAGAAAGTATTGAAACACCATCCAGACAAGCGTAAGGCGCAGGGCGAAGAGGTCAGAAGCGACGACGACTACTTTACTTGCATCACCAAAGCCTACGAGACCCTCGGCACACCGTCCAAACGCAGGTCCTACGACTCTGTAGACCACACTGTAGATGACAACGTACCCACGCCAGCAGAAATTAAAAAGGACGGATTTTATAAAGCTTTCTCAGGTTGCTTTGAATCCAATGCTCGATGGTCAGAAAAGAAAAACGTTCCTTTACTTGGTGATGAGAACAGTACTAGAGAACATGTGGAGAGGTTCTATGCATTCTGGTACGAGTTTGAATCATGGCGTGAGTTCTCATACCTAGACGAAGAAGAGAAGGAGAAAGGAGCAGACCGAGAGGAGCGTAGGTGGATAGAGAAACAAAACAAAGCCGCCAGAGCTAAGCTAAAGAAGGAAGAAATGACCAGGATGCGTAGCTTAGTGGATCTAGCGTATGCTCATGATCCTAGACTGCAACGGTTCAAGCAAGAGGATAAAGATAAAAAGTTAGCGGCGAAGCGAGCAAGACAGGATGCAGTCCAAGCAAAGAAGGCTGAAGAAGAACGCCTTATCAAAGAAGCACAGCTTGCAAAACAAAAGGCAGAAGAAGCAGAGAGAGCACGGTTGGAAGTAGCTCGTGCAGAGAGAGAGCAACTGAAAAAGAACCTCAGAAAAGAACGTAAAGCACTCAGAGACTTATGCAAAACCAACAACTACTACTCAGAGAATGAAGAAGAAACTGTAGGAAACATGGCTGCTGTTGAAAAAATCTGTGAAGTAATGAAAGTTAATGAACTCCAAGACTTTATGAAAGAGCTAGAATCTAAAGGAAAAGAGGCATTCAGGAAAACAGTAAATGAAACAGAAGAAAAACTTGAAGCAGAAAGAAAGGCTATGTTTGAGACCAAGAAAGCTGAAGAACAGAAAGCAAAGAAAGAGTCAGCTGTGAAAGCTCCTATAGAATGGACTGCAGAGTTGACACAGTTGCTGATCAAGGCTGTAAATCTCTTTCCTGCAGGTACAAATCAGAGGTGGGAGGTTGTAGCAAATTTCCTAAATCAACATGGTGTTTTCATAGATGAGAAACGATTCACAGCAAAAGATGTGTTGAATAAAGCAAAAGATCTGCAAAGTTCAGACTTCTCCAAAAGCAACTTAAAAAAGGCAGCCAACGAGGAAGCATTCGACATGTTTGAGAAAGAGAAAAAGAAAGTTGCCAACCATGTAGACGACAGTGGGATATCAAAGAGCGACAACCCTGTAAAATTAGTAAATGGCGTTAATAATTCAAAACCGGTTGATGAAGGAACTAAGCCTGATGACAAGGCATGGACCAAAACTGAGCAGGAATTACTCGAACAGGCTATCAAGACGTTCCCAGTGAACACTTCAGAAAGATGGGAGAAGATTGCCGATTGCATCCCGAACCGTACAAAAAAAGACTGCATGAAAAGATACAAGGAGCTGGTGGAATTGGTGAAGGCTAAAAAACAGGCGGCCAACCTCGCCAAATAG
- Protein Sequence
- MTDAGLCNNRRVVAIPWPIVKKKVECAGAPFLRYYSIKCHGDDALLSTSKANEKAEEVVFDDDVDYLRSLDPKDWKMQDHYAVLGMKNLRYKATDDDIKRAYRQKVLKHHPDKRKAQGEEVRSDDDYFTCITKAYETLGTPSKRRSYDSVDHTVDDNVPTPAEIKKDGFYKAFSGCFESNARWSEKKNVPLLGDENSTREHVERFYAFWYEFESWREFSYLDEEEKEKGADREERRWIEKQNKAARAKLKKEEMTRMRSLVDLAYAHDPRLQRFKQEDKDKKLAAKRARQDAVQAKKAEEERLIKEAQLAKQKAEEAERARLEVARAEREQLKKNLRKERKALRDLCKTNNYYSENEEETVGNMAAVEKICEVMKVNELQDFMKELESKGKEAFRKTVNETEEKLEAERKAMFETKKAEEQKAKKESAVKAPIEWTAELTQLLIKAVNLFPAGTNQRWEVVANFLNQHGVFIDEKRFTAKDVLNKAKDLQSSDFSKSNLKKAANEEAFDMFEKEKKKVANHVDDSGISKSDNPVKLVNGVNNSKPVDEGTKPDDKAWTKTEQELLEQAIKTFPVNTSERWEKIADCIPNRTKKDCMKRYKELVELVKAKKQAANLAK*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00006232;
- 90% Identity
- iTF_01010310;
- 80% Identity
- -