Lpop018224.1
Basic Information
- Insect
- Laothoe populi
- Gene Symbol
- rcor2
- Assembly
- GCA_905220505.1
- Location
- HG992161.1:12921389-12928189[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.4e-10 9.2e-07 29.9 0.0 3 46 133 176 131 176 0.97 2 2 1.3e-11 1.9e-08 35.2 0.0 3 46 402 445 400 445 0.97
Sequence Information
- Coding Sequence
- ATGGTTTTGGCTGAACGAAGTAATGATGTTCGAAACGGGAAGCGGTCAAGGGGGCCAAGCCCTAATGGCCATGGGAGCCCAGATTCCAGCTCTGAAGATGAGAATGCAGTAGTACCATTTGCAGCTGAGAAGATCAGGGTGGGTCGGGATTATCAAGCTGTTTGCCCAGAACTTGAACCGGTTGAACAGCGGAAACCAGAACTGATATCAGACAGAGCATTACTTGTGTGGTCACCAACTTCTGACATATCTGACATCAAATTGGATGAATACATAACAACAGCTAAGGAAAAATATGGATATAATGGTGAACAAGCCCTTGGTATGTTGTTTTGGCACAAACATGACCTCAATCGTGCTTCAATGGATCTTGCAAACTTTACTCCATTTCCTGATGAGTGGACAGTTGAAGACAAGGTGCTGTTTGAACAAGCTTTCCAGTTTCACGGCAAAAGCTTTCACAGAATACGCCAAATGTTACCAGATAAAACCATTGCATCTttagttaaatattattactcaTGGAAAAAAACAAGAGCCCGTACGTCTCTTATGGATGTGGTCAGTGAAGGGCGTAATCCTACTGGCTCTGGTACAGGGAAAAGGGAGTCCGGTGCTGGGTCAGAACCCGGTGGGTCTGACAAAGACTCAGATAATGATGAAAAGAAGTGGACTTACCACCGCGGTATAGTTCGCGGCGGAAAGCTCTCGGGCGCAGCCTCGCAACGCACCGCTGCCCAGCACACCGCCCAGGGTTCGGGCGGCGTCGAGGGCGCGGGCAAGTGGTGCACCGTGTGCGGCATTCAGTGTACCCTCACCACGGCGCACAACTCGCACAAGCTGTGCCAGGCGTGCCTCGTGCACGCCAGACGGACGGGAACTATGAGACCGCTGTGCGGACCGTCGGGTAGACGCGGCCCGGGCTCCAAACAGCAGCGGTACAAACATCGGTTGCCGCGTGGCATTTACATCAATCACGATGATCTGGTCGCTATGGCGACCGGACCGCAGCCCGGCGACCCGCCGCAGCCGGGACTTGTCAATCAGGGCGAAGCTATGCTCAAAGCGATGGACAGAGAGATCATATCGCTCAAGAGACAAGTTCAGCAAAATAAACAGCAATTGAGTGCGATGAAACGCAAGGTTGGAGACACGGGCGTGGATGAGTTTCGGCCAGGTGAACCGCCTGCCAAGATAAACTCACGCTGGACCAATGATGAACTCCTCATGGCTGTCACAGCAGTCAGGAAAtatgGACGAGATTTCCAAGCAATCGCTGAGACACTGGGTACGAAAACAGAAGCCCATGTGCGGTCATTTTTCATCTCATATCGACGCCGGTACAACCTGGACGCGGTAGTACGCGAGCACGAGGCGGAGCGCGGCAACACACATCACATACAAGCGGgtaCGGCAAACACGGAATCTGCAGAGACGGCCACAGAGAACACCAACACAAACAATGGCACAGCATCACCACAAACAACAAATAAAGATGAAAAAACTGAGGTGGATAGCGAGGGCGTGTCGTTGGGTGCACCGGCGGAGCACGGCGGCGTCCCCACCGCACCCGCGCCACCTGGCGTCACACCTGGCACTGCACCGGCCAACGCACCTGGCAATGCTCCTGGCAATGCTCCTGGCAACGCTCCTGGCAACGCTCCTGGCACTGCTCCTGGCACCGCTGGCACCACACCCGCATCTACCGCGTCCACCACGCCGCCCAAACACAAGCCCGCCAAGTGA
- Protein Sequence
- MVLAERSNDVRNGKRSRGPSPNGHGSPDSSSEDENAVVPFAAEKIRVGRDYQAVCPELEPVEQRKPELISDRALLVWSPTSDISDIKLDEYITTAKEKYGYNGEQALGMLFWHKHDLNRASMDLANFTPFPDEWTVEDKVLFEQAFQFHGKSFHRIRQMLPDKTIASLVKYYYSWKKTRARTSLMDVVSEGRNPTGSGTGKRESGAGSEPGGSDKDSDNDEKKWTYHRGIVRGGKLSGAASQRTAAQHTAQGSGGVEGAGKWCTVCGIQCTLTTAHNSHKLCQACLVHARRTGTMRPLCGPSGRRGPGSKQQRYKHRLPRGIYINHDDLVAMATGPQPGDPPQPGLVNQGEAMLKAMDREIISLKRQVQQNKQQLSAMKRKVGDTGVDEFRPGEPPAKINSRWTNDELLMAVTAVRKYGRDFQAIAETLGTKTEAHVRSFFISYRRRYNLDAVVREHEAERGNTHHIQAGTANTESAETATENTNTNNGTASPQTTNKDEKTEVDSEGVSLGAPAEHGGVPTAPAPPGVTPGTAPANAPGNAPGNAPGNAPGNAPGTAPGTAGTTPASTASTTPPKHKPAK*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00018116;
- 90% Identity
- iTF_00787603;
- 80% Identity
- -