Lpop014272.1
Basic Information
- Insect
- Laothoe populi
- Gene Symbol
- -
- Assembly
- GCA_905220505.1
- Location
- HG992157.1:14972891-14975275[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 6.3 9.1e+03 -2.1 0.0 21 35 225 240 213 242 0.77 2 5 5.1e-09 7.4e-06 27.0 0.1 1 45 257 303 257 304 0.94 3 5 1.6e-08 2.3e-05 25.4 0.2 2 44 311 357 310 359 0.93 4 5 5.6e-11 8e-08 33.2 0.0 1 43 363 405 363 407 0.96 5 5 5.3e-09 7.6e-06 26.9 0.0 2 45 414 459 413 460 0.94
Sequence Information
- Coding Sequence
- ATGGATAGCGATTTTGAAACAGACGAAGATTCCGATGTTCAGTTAGAGGAGTTAAATCAGTTGAATGCTGTTTTGAATGCTGACGAGCCGTCAACGAGCACGGCAGCGCCCCATTATGGTAATACTTCAACTGGCTACCCTTTACCAACTACCAGTATAGACCAGCAGTTGACGAGAATAGATACTGCTGTCCTAATAAACAAAGAAACTGATGAGAAACTACGGCGGCTAGAAAACATACTAACAAATCGCCTTGCAGAATGTCAGAATAAATTGAAAGCCCTGTCCGAATTGGACACAGCAAATGACAGACAACAATCGTTCAGGTATGTTTATTGCGGCAAACCATATTTCAAAGATAAATATAACTTCCCTGCACCTGACAATGAAGATACAATTCTAATGGCCAATTCCCAAATGTATGATTTATCTCAAGTTGGGTCTGTGCCAGGCTGGACTGTTCGAGACAAGAGCCAGTTCATTGCAGAATTACAGAAAATGTCCCAAAAGATTAGAAAGGATGAGCTGCATTCAAAAATGGCCCAGCTGCGCCGtgaaaacaaaatgaaaaaagACAAAAAGATTGAAAGTTTGATTGCAGGTATTAGTGTGGAAATTTGCAAAGTAAAAGAAAAACAACTGAATGAGTTAGCATTACCATTAGGTAGAGAATATGACTGGGACACTTTGGCAAACAGATTGAACTGTAGACACACAGCGCAAGAATATGAATCACTATGGAAATTATTCTTTCATcctagtataaataaaaatgcctGGACCAAAACTGAACACAATGTCTTGCAAAAAATTGCCACAGAAAATAAGTTGCAAGACTGGGATAGTATTGCCACAAAACTTGGCACTAGGAGAACTGGTTACCAATGTTTTGTATACTTTAGAACTAATATGACCAACCAGTTTAGTGGTAAGAAATGGTCTAAAGAAGAGGTTGAATACCTTCGAAGACTGGTTGACTATTATAAAGAAGATAATTATATACCATGGGGTAAAGTTGCAGCCTCTATGGAGAACAGGACCAAGAttcaaatttacaataaatatttaagactCATTGGCCACAGAAAAGGCAGGTTTCTCCGAGAAGAAGATTCTGTAATCTTAAATTGCATTGCTAAATTCGGTCCCAACTTTAAAAAGATGCTGGCCTATCTACCTGGCAGGTCAATCATACAAATTCGTAACCGCTACAATGTTTTATCGAAAATGACAGTTTCTATGGTTTGGACACAAGCTGAAGACAGAAAACTTATTCAGCTCATGGCCAATCAGGATAGCAATGTTACTTTTTCCAGTATATCAAAATTTTTTCCTGGAAAAGACCGAATACATATACGGAGTAGGTACTTAACTTTAGTGAGGTGGATGAGACGAAACCCTAACATAGACATAGCTCATGCTCCTCGTAGAAATGCTAGAAGACTTACACACGGCAAACCAacagaaaatttaaataaagctgTTGAAAACTTGAAGAACAGAATGGAGACtgtagtaaatttaaaaaagaacagtaaAATTACAATAGATTCACCCGAATCATTTATTGATGATGCAATCATTGCTACATTATATAATGAACACATGAAAGAATTAGAAATTAAACAGTGTGAGGAAGCAGAAGCTCAAATGCAACGAGAGAACTCTATCTCCTCTGGAAATATCAACATAACAAATTTAAGgaaaatactaatatttttaaatgccgatttaaataaagatacttatattaaaagttattataATGAGCTGTATCCTGGTTTGGACGAATCACAAAGTACAGTTACGGCTAAACTAAAAAACTATTCAAGGAAgaacaaaattacaaatattgaaattaatccTAGTAACCAAAATCCAGATGTTTGGGGTAATAATAGCTTAGGTACTGTAAAAAACGTATTACCTCCACATTATGCTACAATAACTGGGTGCAGAGCTCTAATGGCTTATACAACTACGAGAAACAGACATTCTGAGGGTGGAGTTCATATCCATGTGTTATTGAAAAAGAACCATGTTTTACGAAATCAAATGAATTTGCTTATGGAAcgttttcaaatattatttatatggcctATGTTGCTCTCAAATGAGGGACCTGATCAAGCTACTATTCTAGCAAACACAATGAGAGAAGCCACGTTACGAAAATCCAATAAATCATCTACTACAACGTCCACAAGCAAAATAATTTCTTCAATACCTTCAGTACACATTCCTGAAAAATACAGAAGGACGGTAACATATATAGAGAAGACAGAGAACATTGAACAGATTGATTTATCTGACAAAACTGCAACTGAAAATGTCACCATCAAAGAAGACTTTACAGACAGCAATTTCATGGATTTCAAATTTTAA
- Protein Sequence
- MDSDFETDEDSDVQLEELNQLNAVLNADEPSTSTAAPHYGNTSTGYPLPTTSIDQQLTRIDTAVLINKETDEKLRRLENILTNRLAECQNKLKALSELDTANDRQQSFRYVYCGKPYFKDKYNFPAPDNEDTILMANSQMYDLSQVGSVPGWTVRDKSQFIAELQKMSQKIRKDELHSKMAQLRRENKMKKDKKIESLIAGISVEICKVKEKQLNELALPLGREYDWDTLANRLNCRHTAQEYESLWKLFFHPSINKNAWTKTEHNVLQKIATENKLQDWDSIATKLGTRRTGYQCFVYFRTNMTNQFSGKKWSKEEVEYLRRLVDYYKEDNYIPWGKVAASMENRTKIQIYNKYLRLIGHRKGRFLREEDSVILNCIAKFGPNFKKMLAYLPGRSIIQIRNRYNVLSKMTVSMVWTQAEDRKLIQLMANQDSNVTFSSISKFFPGKDRIHIRSRYLTLVRWMRRNPNIDIAHAPRRNARRLTHGKPTENLNKAVENLKNRMETVVNLKKNSKITIDSPESFIDDAIIATLYNEHMKELEIKQCEEAEAQMQRENSISSGNINITNLRKILIFLNADLNKDTYIKSYYNELYPGLDESQSTVTAKLKNYSRKNKITNIEINPSNQNPDVWGNNSLGTVKNVLPPHYATITGCRALMAYTTTRNRHSEGGVHIHVLLKKNHVLRNQMNLLMERFQILFIWPMLLSNEGPDQATILANTMREATLRKSNKSSTTTSTSKIISSIPSVHIPEKYRRTVTYIEKTENIEQIDLSDKTATENVTIKEDFTDSNFMDFKF*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01010307;
- 90% Identity
- -
- 80% Identity
- -