Lpop029209.1
Basic Information
- Insect
- Laothoe populi
- Gene Symbol
- Myb
- Assembly
- GCA_905220505.1
- Location
- HG992170.1:13256876-13284836[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.8e-16 2.6e-13 50.8 1.3 1 45 75 119 75 120 0.97 2 3 1.6e-21 2.2e-18 67.0 1.8 1 46 126 172 126 172 0.98 3 3 7.5e-20 1.1e-16 61.6 0.5 1 44 178 221 178 223 0.96
Sequence Information
- Coding Sequence
- ATGAAATCTTATCAAATCCCATCTAGTTTGACAATAAACACATGTTTGGACTCCAAAGGAGGCCCCAATACTGGTTCGGCATTACggctggtattatcatTTCTATTTGTCCACAGAAAAAGCGGCTATGACAGCGAGACGAGCGAGTATTCAGAAGACTCGACGGTGTACGAAGATGCACCGGTTACAACCAAAAGTTCTGGGCCGAGGAAGAATGTTAACAGGGGGAGGTGGACAAAAGAGGAGGACAAAAGGTTAAAGATGTTGGTGAAGGCATACAGGGAGAACTGGGAGCGGATCGCGGCGGAGTTCCCCGACCGGTCCGACCTGCAGTGTCAGCAGAGATGGACCAAGGTGGTCAACCCTGAACTAGTCAAAGGGCCCTGGACCAAAGAGGAGGACGAGAAGGTAGTCGAGTTGGTGGCAAAGTACGGGCCAAAGAAATGGACGCTTATCGCGAGGCAGTTGAAAGGCAGGATAGGGAAGCAATGCAGAGAGAGGTGGCACAATCACCTGAACCCTTCAATAAAGAAGACTGCATGGACGGAACACGAAGACCGGGTCATATACCAGGCGCACAAACAACTCGGCAACCAGTGGGCCAAGATAGCCAAGCTACTGCCTGGCAGgACAGACAACGCTATAAAAAACCACTGGAATTCAACGATGCGGCGTAAATACGAGCCGGACCTGCTAGACAGCTTCGAGTCGCTCCGTCGGAAGCGGGTAAAGCCGCGTGCTGTGTATAGCGAGCTCTCTGTAAATAACGCGTACACAGAACACACTGACAAAGTCACTGTCGCCTACAACGATCAAACCTGGTCGGATCCGTTCAACGAATCCACACAGAGCAACACTTCGAACACGAGCCAACCGTCCAAGCAGGTGTTACACTGCAGGCAAGTGCTGAAGACGCAGCTCAACAACATTCAACAGCAGCAACACAGCTCGCCCGAGCGCCGCGGGCTGGTCGCCGCCGATGTAGAGATTGTCGACTCGCCTTTTAAatTTGTGAATATAGAAGCGTTGCCGTCGAACTCACCTTTGAAGAACTATCTCACACAAGCGTCCGCTAACGAAGGCAACCAAGACACAGTAACATATTCAGTGCAACCGGAAGAGATGAAGGAGATAGTGGTGCCGTCGGTGTACTCCTCGCCCAAGAAGCACCCCGAGACCAACAGCCCCCCGCCCATACTGCGCCGGAAGAAGAAGGCGCAAGTGTTGACGCCCACGCCCAATCCGTGGGCAGACACGATAAGCAAGGCGCTAGAGTCCCGGGACTGCGGGGTGACTCCGATCAAGGCGCTGCCCTTCAGTCCGTCGCAGTTCCTCAACTCTCCCGCCGGGGTCTCCTTCTCCACCATAGAGTCCACGCCGCTGAGACACGCCGCACATACCAAGGAATGGAGTGCGAGTCCCCTTCTCCACACTCCGACCCCTGCCAACATCACGCCCGGACCTCATCATCTTAAAACAACCACGCCCAAAACCCCAACCCCGTTCAAAATCGCAATGGCTGAGATCGGCAAGAAGTCTGGTCTGAAGTACGAACCCTCAAGTCCTGGACTGCTGGTGGAAGACATCACGGAGATGATCAAGAGAGAGGAGAACTCTGACACCACGGTCCAGTTGAATGACTCCATGTTGTCCTCCACTGCCGACCATGAGAATGCTCAGGTGAACGACTCCGGCATCGGGTCGTTGAAGCGTCGCGGCTCCGACTCCCAGGGCAAGGAGAACGTGCCGCGCTCCGGTAGCACTGCCGGCAGCACTGCTGGCAGTGGCAGTAGCACGCAGGCACACAAGCGCGCTCGCAAGGCGCTGGCGAGCAGCTGGGGAGCGACCAGCACGCCACACCATCAGCATCATCAGCACACGCTCGTGCCTGATGTATCCTTCATCGTCGAGACGCCGAGCAAGACCCTCGAAGGCGACAGTTCCGTGATGTTTTCCCCCCCCTCGATAGTGAAACACTCCCTTCTAGAAGAGTCCACGAGTCTACACAGCTTAGTCAGCGAGACCCCGGACCCCAAGTTCGACATAGACATCGAAGCGGTCATCAGCGAGAAAACCAAGGTACAACACGGcaatatccatactaatccCTTACCTAACACCTTACACCCCTTAATATACCAATACACACCCTTCAGGGACATTACCAATGTAGATAGAAACTTCTCCAGGCTTAATGCGGAACGTATACGGACCATAAATGCGAACGACATCGACCTTATAGCCCCTAAAGATGTACTGACCAATGCGCTAGCGGAACACATATACAAAGTAACCAATCAGAAGCCCTCCACGTCTAAAATAGAAGAGATATTGACCAATAAAGCGAAGGAGAATCAGGGTCAGTGGTGGGGGGATAGGGATACGGGACAGGATGATGCGTTCTCGAATGATTATTATATGTTTAGCAATTTGTAG
- Protein Sequence
- MKSYQIPSSLTINTCLDSKGGPNTGSALRLVLSFLFVHRKSGYDSETSEYSEDSTVYEDAPVTTKSSGPRKNVNRGRWTKEEDKRLKMLVKAYRENWERIAAEFPDRSDLQCQQRWTKVVNPELVKGPWTKEEDEKVVELVAKYGPKKWTLIARQLKGRIGKQCRERWHNHLNPSIKKTAWTEHEDRVIYQAHKQLGNQWAKIAKLLPGRTDNAIKNHWNSTMRRKYEPDLLDSFESLRRKRVKPRAVYSELSVNNAYTEHTDKVTVAYNDQTWSDPFNESTQSNTSNTSQPSKQVLHCRQVLKTQLNNIQQQQHSSPERRGLVAADVEIVDSPFKFVNIEALPSNSPLKNYLTQASANEGNQDTVTYSVQPEEMKEIVVPSVYSSPKKHPETNSPPPILRRKKKAQVLTPTPNPWADTISKALESRDCGVTPIKALPFSPSQFLNSPAGVSFSTIESTPLRHAAHTKEWSASPLLHTPTPANITPGPHHLKTTTPKTPTPFKIAMAEIGKKSGLKYEPSSPGLLVEDITEMIKREENSDTTVQLNDSMLSSTADHENAQVNDSGIGSLKRRGSDSQGKENVPRSGSTAGSTAGSGSSTQAHKRARKALASSWGATSTPHHQHHQHTLVPDVSFIVETPSKTLEGDSSVMFSPPSIVKHSLLEESTSLHSLVSETPDPKFDIDIEAVISEKTKVQHGNIHTNPLPNTLHPLIYQYTPFRDITNVDRNFSRLNAERIRTINANDIDLIAPKDVLTNALAEHIYKVTNQKPSTSKIEEILTNKAKENQGQWWGDRDTGQDDAFSNDYYMFSNL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00341263;
- 90% Identity
- -
- 80% Identity
- -