Lpop014427.1
Basic Information
- Insect
- Laothoe populi
- Gene Symbol
- Mblk-1
- Assembly
- GCA_905220505.1
- Location
- HG992157.1:18351230-18358915[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-11 4.3e-08 33.7 0.1 1 36 80 116 80 119 0.93 2 2 9.6e-19 1.2e-15 57.9 0.0 1 43 281 324 281 326 0.95
Sequence Information
- Coding Sequence
- ATGTTCACCCCCAGGCTAGGCGAGGGTGGTGACAAGCCGCCGACGCTGTCGTCTCCGAGCCCGGCGGAACAGCCCCTGGACCTCAGCGCGAAGTCCACCTCCAGCACAAGTGGGACACCACCTCCGGACTCAAAGCTCCTCGACAACAGaTTAAAGCGTGCATGCGCAGAAAGTGCGTCAGGTTGTGCGTCGACGTCACCCGGCAACAGCACAGGGAGCGCGGCCCGGCGCGGCTACTCCGAGGAGGACCTGCAGGCGGCGCTGCGCGAGATACACGCGGGCCGTCTGGGTACCCGCCGCGCCGCCGCCATCTACCACATCCCGCGCTCCACGCTGCGCAACAAGGTCACCAAGTACCCCGCCGACCCGCCGGACTCCGACCTGGACAGCGATGACCGCGCCGACTCACCACCGTCCGTCATCCTCAAGATACCAACGTTCCCGCCGCCGGACGACAACAGCCCCTCCCCCGCCGCCGCGCCGCACGCGCCCCTCACACCCCACCCCCCGCACCGCCCGCTACAACCCTCACCCAGCCTACTGCTGCCCGCCGTGTACGCGGATCCACCCTCCTCACAACACATCTTCACCTCGCTCAACGATGTCATCGCTAAGAGCATCAGCCAGAAGTTCCAGCAGCCGATCGACCGATCACACCAGTCGGAGTTGCAGTTCTTGCGTGGGCCAGACGCGCGACATGTATCCGTCATCAAGACGCAAGCGGACAATCAGCGCAACTATGCGATGCCGTGCAACTCGAAGGCGACCTCCAACAATAACGGGCAACCTGCGGCCGGTGGCAAGGGCACGCGGCCCAAGCGCGGCAAGTACCGCAACTACGACAGGGACAGCCTCGTGGAGGCGGTGAAGGCGGTCCAGCGCGGGGAGATGTCCGTGCACCGCGCCGGCTCCTACTACGGCGTACCGCACTCGACGCTCGAATACAAGGTGAAAGAGCGGCATCTGATGCGGCCGCGGAAACGAGAACCGAAGCCGCCGCAGGACACCAAGCCTCAGCCGCCAAAGCCCCAGCCGCCGAAACCGCCGACCAAACCGTTTTCAAACGGGCTAAACGGACCTGACACGCCGGGTTACCCGCCGGGGTACCCGTTCTGGGCGGCGCCTGGCTTCCCGCCACCGCCTGCGCCCGATCTGTACGCGTCGCACATGATGCGGCGGCTGCGCGACGAAGCGCCACCTCCGACCAACGGCTCGTTCCTCGAAGGCATCATCCGGTCGAGCCTCGAGCGGCCGGGGGCGGCACTGCTGCAGCGACTGACGGAGTCGCGCGGGCCAGTGGAGGCGCCGAGCCTGCTGCGGCGGCTGGCCGGCGACGCCGACGAGCCGCCCGCGCGCCGCCCCAGAGTCGACAGCTCCGACCACGCGCTGGCCGCGGAGATGCGCGAGGCGGTGCAGCGGCTGCGCGCCGACAAGCTGCGCCCGCGCAACGGCACGCCGACTCCCCCCGCGCCCGCACCCGCGCCCCTGTCACCTCCCGTGCACCCCGCGCACCCCGCACACCCCGCCGCGCCCCCGGACCGCGCCTAG
- Protein Sequence
- MFTPRLGEGGDKPPTLSSPSPAEQPLDLSAKSTSSTSGTPPPDSKLLDNRLKRACAESASGCASTSPGNSTGSAARRGYSEEDLQAALREIHAGRLGTRRAAAIYHIPRSTLRNKVTKYPADPPDSDLDSDDRADSPPSVILKIPTFPPPDDNSPSPAAAPHAPLTPHPPHRPLQPSPSLLLPAVYADPPSSQHIFTSLNDVIAKSISQKFQQPIDRSHQSELQFLRGPDARHVSVIKTQADNQRNYAMPCNSKATSNNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDTKPQPPKPQPPKPPTKPFSNGLNGPDTPGYPPGYPFWAAPGFPPPPAPDLYASHMMRRLRDEAPPPTNGSFLEGIIRSSLERPGAALLQRLTESRGPVEAPSLLRRLAGDADEPPARRPRVDSSDHALAAEMREAVQRLRADKLRPRNGTPTPPAPAPAPLSPPVHPAHPAHPAAPPDRA*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00341252;
- 90% Identity
- iTF_01010285;
- 80% Identity
- -