Lpop013989.2
Basic Information
- Insect
- Laothoe populi
- Gene Symbol
- -
- Assembly
- GCA_905220505.1
- Location
- HG992157.1:8686357-8687984[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.021 70 4.9 0.1 51 86 107 141 96 142 0.83 2 4 0.00059 1.9 9.9 0.2 49 86 200 235 173 236 0.81 3 4 0.11 3.6e+02 2.6 0.0 49 83 290 323 282 325 0.82 4 4 0.022 72 4.8 0.0 50 83 391 423 367 426 0.84
Sequence Information
- Coding Sequence
- ATGGATTTAAATAACACACATAACCCGAGTTACTGGTTCGTTATAAAAGAAGAtcaaagtaattttatattcaccagcaataattttacaatacaaaCCCCAcaaaTTTCAGGACAAGAGGCGAGATACATCGTCGACTCGGGTGATAATAGGCAATATATCGAAATAAATGAAGCTCCTGTAATAGTTCAACAGTCTACAGAAACTTGTGACAAAGATACACATAAAAACAAAGACGAAGATCACTTTTGGGACAGGAATAAAGTGAAAACACTTCTCAATTTATGTTTAGagaacaaatttaaaaatgcacTTAAAGACAAGTCTGTATGGCATGAAATTAGTACACATATAGGAACAAGTGTTGAGGAATGCAGTAAAAAGTACAGAAATCTTAGAAGAACTTATATAAGATTACTAAAAAAGAAAAGATTGGGCAAGGAAATCAAATGGGTTCACTTTAACATTTGTGAAGAAGTATTTCAGGAATGTAAGTCTCTACCCCCGTCGGTGCTGGAACCGTGggaagattataaaataaagaaattgcttAGCTTATACATTGAAAATTTGAATAAGTTTAGAAGTCCTGACTGCTTGCAAAAAGATTTATGGAAAGAAATAGCAAATCAAATAGGAACTACAGAGTATAACTGTTATCATAAGTTCAAGAACTTGAAAAGAGCTTACTTCAACTGGTTGGAGAGAAGTCGCGAAACTGGAAAACCTATAAAATGGCAATATCATCAATACTTCGaaagaatattttataactacaaCCCTGCATCAGGTCCTTGGGatagaaataaaactaggtTATTGGTAGATGCATATATTCAAATAGCCGATAAATTTAAGAACCCTAGGATTCAAAAGAAAGAGCTTTGGAAAGAAATCTCGGCAGTAGTAGGAGAAAGCCCTAGCGACTGCGACAAAAAGTTTCGCAACTTAAAACAAACCTATATTCGGCTAAGAATGAAGGCAGATGCCGGCAGAAGTATCACCAAATGGCGATATTTCAAAGATTTTGAAACTATTTACGGAAATACAACTTGTATTGCGGGTACCGATGAACCAAAAATCTCTCAGAAGTCGACTGAAGACGATTATGTAAAACAGCTGTTATCCTTTTACTTGGTGAACAAGAATAAATTTAGGGACCCtctaattaaaaagaaaaatgtgTGGAGGACATTGACTCACAAAATCGGATTATCCACAGAAGAGTGCGATAGAAAGTTTAGAAATTTGAAGCAAACTTATATTCGGCTAGCAGAGAAAAAACGAGAAACTGGTAAAAATAACAGCTGGCCGTACTACTCGTATTTCGAAAAAATATTCGATCAGCCTAGTGTGCCAGGTGCGTGTGGTCAGGTCAATGTAGACGACGAGACTCTGTCAGAAATAAAACGCGTTGTACGCGACATACAAGATAAGAAAGATAACGACAAATTTGAAAAGTTGTTGCAACACATAGAGGAATCTAACAATATTCAGCGAGATAGAAATAGAATATTACAAGCAATTTTGGATAGGAAATGA
- Protein Sequence
- MDLNNTHNPSYWFVIKEDQSNFIFTSNNFTIQTPQISGQEARYIVDSGDNRQYIEINEAPVIVQQSTETCDKDTHKNKDEDHFWDRNKVKTLLNLCLENKFKNALKDKSVWHEISTHIGTSVEECSKKYRNLRRTYIRLLKKKRLGKEIKWVHFNICEEVFQECKSLPPSVLEPWEDYKIKKLLSLYIENLNKFRSPDCLQKDLWKEIANQIGTTEYNCYHKFKNLKRAYFNWLERSRETGKPIKWQYHQYFERIFYNYNPASGPWDRNKTRLLVDAYIQIADKFKNPRIQKKELWKEISAVVGESPSDCDKKFRNLKQTYIRLRMKADAGRSITKWRYFKDFETIYGNTTCIAGTDEPKISQKSTEDDYVKQLLSFYLVNKNKFRDPLIKKKNVWRTLTHKIGLSTEECDRKFRNLKQTYIRLAEKKRETGKNNSWPYYSYFEKIFDQPSVPGACGQVNVDDETLSEIKRVVRDIQDKKDNDKFEKLLQHIEESNNIQRDRNRILQAILDRK*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00063367;
- 90% Identity
- -
- 80% Identity
- -