Lpop005552.1
Basic Information
- Insect
- Laothoe populi
- Gene Symbol
- Jarid2
- Assembly
- GCA_905220505.1
- Location
- HG992149.1:21424711-21444950[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.1e-17 3e-13 50.9 0.0 5 88 792 872 788 873 0.91
Sequence Information
- Coding Sequence
- ATGTTTTACTTAGAAAATCACTTATATAAATGTTTGTCCCACAGTCGTAAGGTGCAGGCGCAGCGCAAATTTGCACAGGGTGCGTTTGTGCCGCCATCCAACAACATGCCGGAGCGTAGGCGCGATGCCACTCCTAAGGAAGACGGCGTCGGCAGCCAGCGTGTCGTGCAGAATACTATCGTGAAAATGCCTGCCAAGAGCCTCCTTGATGTTGTGGCATTTAAAAacatgcaCAGCCACTTGCAACCAGTCGTATTACTGAAGAGACTTCCTGAATCTCCAGCCGAGAGCGTTTTACGTCTGCCGGTCAAGGAGAAACCACCAGAAAATAACTGTGTTGGCAACGAAGTGCCGGCCTTGTTCAAAGGGCCGCGGTATGCACGAATAAAGCAACTCGCTGTTATGAAGAGGAAGGCCTTGCATACTATGAAACTGCGGTCCAGGCAGGGCCAAGCgtcgaagaagcggtcgaaagcGACGAAGAGGCCTCATCCGGAAGAGCGGCCGCCGGTCAGGCCAAAGAGGCGTCGCGTGGTCCCGCCCTCGGTGTCGGAGTTCAGTGTGGATGATAATAAGCCACTGACATACTTCACCAAAAAATCACCAGCAACTGCGAACAGACCGGCGACTCGATTGCCGACGCCGAGAATGCCAGCACCTAAGTCTCCGACACCTGGACCATCGCAAGCAAAAGTGCCAGCACGCGACACGCCCTTATTCGAGGAGTTATTCTCCAGCATATCGTTAGCTATGGACAGGCGCGTCATCTCGCTGGGAGACCTTTTGAAGTTCAGTTGCGGCTCACCGAGCGACCTAAACAAAAAACTCATCGCCGATGGCTTGGCACCCATAGCTAGAGAGCAGGCCTCTAGTTTACTGGAAAAGCTTAAGGGACCGTATTACAGTAGCTCTCAGATCGCGCGCTGGGTAGACGCTTGTCGCCAATCAGCGATCCCTGTTCCGAACGAAATCGCCACTGAAATGTTTAAGGCGCCGCTCCCTCCACCACCGTCGCTTCTGCACAAGCGACTCGAAACACCCAGCTTGGATATCCTCGCGAAAGGTGACGATGACACCATATCTGTCCGCTCGTATATTGACATCCCTGATTGTCCCTCTGGGAAATACACCACCGTTAAGGATGTTTTGGTGGCACCAAAAACAGAGATTGCGTCTAGATGTAAGAAGTGCAAGCCGTGCTCGAGAGTCGACAAGGTCCATAAAATTGCGACACTCGTTCTTTTACCGCTAAGTGATAAAGCGAATTTAATTGAAGATATATACGAGTTTAAAATGAATGATGATATGGCGATATCCAACACGCGTATGAGTCGCTACAGAGGTGGGAACAGGCAGGCGAACCGTACAGCGAACGACGGTACCAGCTTGGCAATGGCCCGCGGTGGCGAACCTTTGTATCTTGACATTTTACCGGAACACGATACACATATTATACAAATCATGTCGGACTGTAATCATTCTAAGACAATGCGTGCCAGACTTATCCCCAAGTCTCAGGCGACTTCCGCCAATGAGTTATCCTTGATTGAACACGAGAACTTGCTCGATCAATTGTTGATAACTTTGAAAGCCAGCAATTATGACACTACAGACCATGAAGAAATTGGTGACAGTCGGCTGAAAATCACAGAGTCTTGCAGTTCGGACGCAACTAACAAGCCTGTTGAACCTATAACCAAAACTGCTCGACGCAAGGTTGCATCCAGGAGTGCCTCAAAACTTCAACAAAACAAATCAAACGTCGATGAAACAGGTCGCGCCTCAACTAGCAGCCAAGTACTTAATGACGATACTGTCGCTGATGATAATAGGAACTGCATAGAAGATGTTACCATAGAGGGTGAAGTAATTATGAACCGGCATGGAAATCGAGTTATTGATAAAAGTAATAACGATGCAGGAGAAGGTACATCGAGACAAGCAAATACTAACATGGAATGTAACGGTCCATCCAACCGATTGTCGAATTCAACTGACACATCTACACATTTGCGCATATCTAACGTGACTTCAGTGGAAACGGTACACGTATGTGAAACCCCAGAGTCTCCGGTAGAAAGGGAAACAAGGAGCTCGGAAGCGGCAAAATCGACCGCCAATAAAACGTTCCCTAAGAGTTTGGAGACTGCCAAGATGGTGGATGCGCCAGTTTTCTATCCGACTGAAGCGGAATTCCAAGACCCGATAGCTTATATCGAGAAGATAATGCCGGCTGCGGCGAAGTTCGGTTTGTGCAAGATAGTAGCTCCAACTGGATTTACCCCTTCGTGCAACAGTAGTGAGGACATCAGGTTCAACGTGATGAACCAGTACGTGGCTAGGTTGTACAGTAGATGGGGTCCGGCGCAGAGAGAAATGTGCGCCATCAAGGCTTACCTCGCCTCGCAGAGCGTGGTCTTCACCAGGGCTCCATTGCTCGACTGCATGGAGGTCGATCTACCGAAGTTGTACCACATGGTCCAACATAACGGGGGTCTGAAGAAGGTGATAGAGAAGAAGCGATGGTCCCGGGTCGCTGACGACATGCGGAATAGTCGATGCCTATCCCCTGGGAAGAAGCTGGACTTCATCTATGTCAAGTATCTCCTGCCGTACGGGACGCTGTCACATctGGAGCGTCAGGACATGATGCGAAAAGTGGAACGAGGTTGGTTCAAGAAGAACCAGAAGATGCTTGACCGGGCACTGAACCCACTACACAGACAGAACAAGCTGCTGGGTGAGTCTGACTCCTCTGCGGATGAAGAGGACGAGGAGGACGAGAACGTGACCCTGGCGCTGATGGAAGCCGAGGATTGCGTGGTGCTCGGAAGGCATATGAACCTTGCTATGTTCAAAAGGACTGCGGCGAACATGATGACCGTGCAGTTCCCACCCATCATGACCCCACCCTCCGTCACAGATGTAGAGTCTGAGTACTGGAAGATAGTACTCCTGGGCACAAGCCACGTGTGTGTTAACTCAGCATCCATCGATACTGGGAGTGAAGGCTATGGCTTCACCAAGAACAAGAACGATCCTTATGGCAAGCATCCGTGGAACCTGAAGATGCTAAGTCAGAATCCGGGCAACGTTCTGCGTTCACTAGGCTCAGTGTTGGGCGTCACTGTGCCCACGCTACACCTGGGCATGTTGTACTCTACAAGTTGTTGGCATAGAGATCCACACGGATTGCCCTGGGTTGAATATATGCACACCGGTCCGGGCAAAATTTGGTACGGAATACCGGACGAGCAAAGTGATAATTTCCGTAAAGCTGTGGAGAAGTTGTGTCCCACGTCGTGCCAGAACAAGTCTATCTGGCTACCCTCTGACATCACCATGATACCGCCGAATCTACTTTGTGAGCACAATGTGTCCCTGTCGCGTATCACCCAGGAGCCGGGGGAGTTCATCATTGTCTTCCCGAAGGCGTACTCCTCCTCGATCACTACAGGGTACACACAGTCCGAGAGTGTGTATTTTGCCTCCAACTCTTGGCTGAATAGTGTGCATCATATATTCCAGGAGGTGCGTGAAAGCTGCGAGCCCACCATGTTTTCGTTGGAGCAGCTTCTAGTGAGCGTCGCGAGGGACACCAGGGCCTCCCTGGGGGTCCTCCAACAGGTCCACGCACATCTGAGCCCGATAGTAAAGGAGGAGATAGCCAACCGACGCGCCCTACAGTCCAAAGGATTTACTCTCACCACCGCAGagACCCGTGCTCGAAAACAGAAGACGCGCCGTCGCGCCGGCGCTTGGAATGTACGCGAACAAGACGAGTGCGAGATCTGCCGCACCACACTCTACTTCTCCAAGGTAACAAACATGACGGGAAAGAAAACCTGCGTATGCCTTCAGCACGCGCTGCAACTAATTGAACTGCCAAAATACGAAAAGGAAGTGTCCACGTACGAAGTAGTAATTTACTTCCCTGACAGCGAACTTAACAATATAATAGTCAACGTACAGAAAAAGTTGTCCTTATAA
- Protein Sequence
- MFYLENHLYKCLSHSRKVQAQRKFAQGAFVPPSNNMPERRRDATPKEDGVGSQRVVQNTIVKMPAKSLLDVVAFKNMHSHLQPVVLLKRLPESPAESVLRLPVKEKPPENNCVGNEVPALFKGPRYARIKQLAVMKRKALHTMKLRSRQGQASKKRSKATKRPHPEERPPVRPKRRRVVPPSVSEFSVDDNKPLTYFTKKSPATANRPATRLPTPRMPAPKSPTPGPSQAKVPARDTPLFEELFSSISLAMDRRVISLGDLLKFSCGSPSDLNKKLIADGLAPIAREQASSLLEKLKGPYYSSSQIARWVDACRQSAIPVPNEIATEMFKAPLPPPPSLLHKRLETPSLDILAKGDDDTISVRSYIDIPDCPSGKYTTVKDVLVAPKTEIASRCKKCKPCSRVDKVHKIATLVLLPLSDKANLIEDIYEFKMNDDMAISNTRMSRYRGGNRQANRTANDGTSLAMARGGEPLYLDILPEHDTHIIQIMSDCNHSKTMRARLIPKSQATSANELSLIEHENLLDQLLITLKASNYDTTDHEEIGDSRLKITESCSSDATNKPVEPITKTARRKVASRSASKLQQNKSNVDETGRASTSSQVLNDDTVADDNRNCIEDVTIEGEVIMNRHGNRVIDKSNNDAGEGTSRQANTNMECNGPSNRLSNSTDTSTHLRISNVTSVETVHVCETPESPVERETRSSEAAKSTANKTFPKSLETAKMVDAPVFYPTEAEFQDPIAYIEKIMPAAAKFGLCKIVAPTGFTPSCNSSEDIRFNVMNQYVARLYSRWGPAQREMCAIKAYLASQSVVFTRAPLLDCMEVDLPKLYHMVQHNGGLKKVIEKKRWSRVADDMRNSRCLSPGKKLDFIYVKYLLPYGTLSHLERQDMMRKVERGWFKKNQKMLDRALNPLHRQNKLLGESDSSADEEDEEDENVTLALMEAEDCVVLGRHMNLAMFKRTAANMMTVQFPPIMTPPSVTDVESEYWKIVLLGTSHVCVNSASIDTGSEGYGFTKNKNDPYGKHPWNLKMLSQNPGNVLRSLGSVLGVTVPTLHLGMLYSTSCWHRDPHGLPWVEYMHTGPGKIWYGIPDEQSDNFRKAVEKLCPTSCQNKSIWLPSDITMIPPNLLCEHNVSLSRITQEPGEFIIVFPKAYSSSITTGYTQSESVYFASNSWLNSVHHIFQEVRESCEPTMFSLEQLLVSVARDTRASLGVLQQVHAHLSPIVKEEIANRRALQSKGFTLTTAETRARKQKTRRRAGAWNVREQDECEICRTTLYFSKVTNMTGKKTCVCLQHALQLIELPKYEKEVSTYEVVIYFPDSELNNIIVNVQKKLSL*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -