Lpop025227.1
Basic Information
- Insect
- Laothoe populi
- Gene Symbol
- ARID4B
- Assembly
- GCA_905220505.1
- Location
- HG992166.1:10671638-10699086[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.2e-30 2e-26 93.1 0.1 1 89 248 334 248 334 0.96
Sequence Information
- Coding Sequence
- ATGGTGTCACTAAAGGCTGGTGGTGGCTCCGTCACAGTGAATGATGATGTTATCAAAGGCACACTGCGTGTTGGTAGCACTGTAGAAGTGAAACAGGATCCCAAGAAGGATGCCATGGAAGCTGTCATCACTAAGATACAGGATTGTAGCCAATATACTGTTGTATTTGATGATGGTGATATAACAACATTACGTCGTTCTGCGCTTTGTCTTAAAAGTGGACGACATTTTAACGAAAGCGAAACGTTAGATCAACTCCCACTCACACATCCAGAGCATTTCTCTACACCTGTAATAGCTGGAAGAAGAGGGAGACGGGGTAGAGCTCaATCTGAGGAGAGCGAGGGCGAGGGTCCGTCGCGGCGCGTGAAGGACAGTGCGGAGCGCGAGCCGCACGTGGGGCGCGTGGTGCTGGTGGAGGCGGCGGGCGGCGGCGAGCGGCGGCGGCCGCACCAGCCGCACCAGCCCGCCTTCCCCGCGCTCGTCGTCGCGCCCACCGCGCAGATCAAGGTCAAGGAAGACTACCTCGTGCGCTCCTTCAAGGATGGACGATATTACACGGTGCCCAAGAAGGAGGCGCGCGAGTTCCGCAAGGGCAGCGCGCCGCTGGAGTGGGCGGGCGTGGAGGCGGCGCTGCAGTACCTCAACCAGCAGGTGCTGCCGCCGCACTGGGACCGGGACGCACTGTTCAACGAGCCCAGGAACACATCGGATGATAGTTCAGACGATGAACCGCGCGAGGAGAAGGACCACTTCGTGGCACAGTTGTATAAGTTTATGGATGACCGCGGCACGCCGCTCAACCGCAACCCTACAATAGCTAACAAAGATATTGATTTATACAGATTATTCAGGgtGGTTCACAAACTTGGTGGCTATAACAGAGTAACAAATCAAAATCAGTGGAAGACGATTGCTGACAAGATGGGATTTCATTCAGTCACTACCAACATTAGCAATTTATGCAAGCAGGCTTATAAAAAGTTCCTCCACAGCTTCGAGGAGTTCTACCGCAAGCTGGGCGTGACACTGGTGGCGCACCCCCGCGGCGCGCGCACCCCGCCCGCGGGCCGCTCGCTCATCCGCGACCGCGACCGGCATCCGCCCCCCTCCGCCTCCGCCACCACCACCGCCTCCACTTCCGCCTCCACCTCCGCCTTGGCATCCGCACCTACCCCCGCCTCCGCCTCCGCCTCTGCCTCCGCCTCCACGCCGACCAGCACACCCAGCCACACTCAGAGGGGTAAGGACAAAGATTCAGATAAGAGTGAGACAGATAAAAGCGAAAAGGAGGAGAAAATAGAGAAAAGTGAACGAGTAAAAGAGAAACCGAGAGCCAGCGACGGCGAGGATAGCGCTGACAATCAACCTTTGATATCAGCTGCGCCCAAAATAGAtaaagaaaaggagaaagaaagagaaaaagagaaagaaaaagagaaagaaagagaaaAAGAGAAGGAAAAATATAAGGAAAAGgaaaaagataaagataaagacaaGAATAAGGATAAGGAAAAAGATAAAGACAAGGATCTGGATAAGGAAAAAGATAAAGACAAGGATAAAGATAAggaaaaagagaaagaaaaagaACGAGAGAAGAGAGAGAAGTCTTCATCAACTACAACCAGCGAAGAGAAAACAGTCTTGAAACCGCGCTCGCAATCGAAAGGACGCATTATTCTGTCGACTAAAACGGACTCGCATGACAAAAGAACTCCTAAAAGGCGCCCACTGTCTTCTAAAAGTGAAAGTGCAAGTACTAGTACTTCGAGAGCATCTCGTCGGCCACACGTGTCTACCGATAGTGATAGTTCAGGCAGAGCTTCAAGATGTGGGCCTACGAAGAAGATGCAGAGTCGCCGCAGTCAGAGCGCCAACTCTGCGAGCAGTGGCAACACCATCGCGTCCAACAGCAGCAAGCGACCGCGCAAACGGAAGAATACAGAACCATCAGCAACAGAAACTACCCATACTAGAATATCGAATGTGAAAGCGGAAGTCGGCGACAAACTCAAGGTTTATTACGGGCCCACACAATCTGAATCTAAGGTAACCTATGAAGCCAAAGTGATAGAGATATCGCCAGAGGGCATGCTTCGAGTACACTACACCGGGTGGAACACGCGCTACGACGAGTGGATCAAACCACAACGCATCGCACTTAATGTCACGCAGCATGAAGCACGCAATAAGAAGGGTACCAGTAGCAGTAGGCGTGTTCGAGCAAAAAGAACGGAAGAATCATCTGCATTGTCTGACTCTGACAGTGATTCCGACAGCGACGAAGATGTTAAAAGATCATCAAAGAAATCCGATGATAAAAGTCGCTCGAAAACTCCATCAAGATCCAAAGATGCGAAGTCAAGCGACAGTAGCAGTTCTAACAAACCGCGCAAGAGGTCTGCAAGAAACATATCCACACCAACTAATGCATCTCCAGCGAAAAAGCCGCGTACAAGTGTTTCTAGTCACCAGGGTCGAGATTACGATCTCATCGAGATCAGATCGGAATTGAAAGGTCTCCAAACAGTGAAACAGGAGCCAGAAGAAACAACAGTTATATCAGAAACAGTAGAAAAGGAAACCGCAGTAACTTCTGCTCCAGCTACGGCTCCTTCTGAGCCACCGCGACCAGAAAAGCAACCTGAAGACGTTTATGAATTTAAAGAACCCGAACCGTTCGAGCTAGAACTTCACGATGAAAAGAAAAAACGCACACATCGCATTTTCGATGACATCTCTCCCAGTAAATATACGTCTACATTGTCAAAATCTTTAAGCGAGGAAATTTCCGAGGACCCATTGAAACCGCGTCCGTCTTCACTGAGATCTCCATCTTTATCACCTTATAGGGATTATGGAAATATAAGGGAACCAGGAAGACAGAGCCCAGAAGATGATTCTAAAGACTGTCTCTTTTCACTAGATGACGATTCGTTTCCAGGCGATGGGAGCTCAGGTCCTACATTCGAAGGTTTTACACCGGCTAAGAATCAAGAAACTTATTCTAAAAAAAGCAAAGTATCAAAACTGAGGGAATTAATTGATGATTCTCCTGACAGTCCCGCGGATGACGAACAATCGTCTGATGACGATCAGGATATGATTATAAAGGAAGCAGAGGATGAAGATAGAGAAGCAAAGCCTGTCATACCGCCAGTAGTCGAGAAACAGAAATCCCCTGAACAAACTGCAAAGGAAGAAATTCAAATTCCGGAGTCCACTCAAGAAATTGAGCAATTGACGGAAGAAGTTCCCGAAATTGAAGAAGAACCTATTGAAATATCAATTCCAGAGCTATCTACAACTCTTTCGCCAGCGAAGGATCTTGCTATAATTGTCACTGCAATTCCTTCATTTGTAACATCTACTGTAACAATAACAGCGCCTGAGGAGGAACCAATTAAAATGGCAGTATCAGAATTGTCTGTACCTCCTGTAGTTATTGTAGCTCCGCCTGCAGAAAACGTGAAAGAAAGTATTCTAACCATAACCATCGATAAAAAACTAGATCCAGAACCTGTGATATCTAAATTTGAACCTCCTTCCAGTCCACTCATCGACACTGAAGAAGATAAATCCGAACCCGACAGCCCTGCCAGGATAGATGTTATACCTGATCCGCCACCCGCATTCTTATTACAATCCGAAGGACCCAAAATAGCCGAAAAGCTATTGAAAGCAATCAGCAGTGCTAAGAGACTATCTATGTCACCACCTCCTATGGATGATAGGTCTGAGACGCCGAAAACTGACCcactaaaactaaataaaccAGACATAAAGATCTCTTCGCTATCTCCGGAACCAAGGTCTGTAACATTAAAAAGCGAATCTATTAAATCATTACCCAAAATTGAACCTAAAAAAGTTCGAACTCCAGAAATTGGAGACTCTATATTCGGTGAGCCTTCTAAATTAACTGACGCCAAACGTGATTCTGctgacattaaaaaagtaaaaccaAAGGAAGCAACACCTCCACGTTTACAAAGTCCATTGAACATACTCGAACGCCGCCGAAGTGTGGCGGAACTTACACTACCTGTACCCGGGAAAAATAACAAAGTGCTCAGTgatacaatacaaaaattatCAAGTCAGATAAATCAGGCAGCCGCTGCAGTGACAGCCATACAGTTGCCGCCGTTCCCGACCGAAGATAGGAGCGAGTCCAGCGACTCAGATGATTCCGACAGGagATTAATCATCGACAAGCTGTCAGCGGAAGACTGGGGCAGCGGTGGCAGCTCGGAGCCTAGTCGCAGCCTGACTGTGCCCGGCATGGTTGGCGTGGGCGGTCTGGGCGGTGTGAGTGCGGTGAGCGCCGTCGCGTCCGCCAGCGTGCGGGCGCTGCACGCGGGCAAGTCGCCCGGCGAGTGGAGTGCGGGCGAGTCGCTACTCATGCTCGAAGACGCCTGCAAGAACGAACGGAAACATAGCGCGAGCGTGGTAGTGGCGGGCAGCGGGCGCGTGGTGGCGACAGCCGGCGTGATCTCCAGCACAGTGTCGAGCGTAGTGTCGAGCGCGGCCAGTGTGGCCAGTGTGACAGCGTGCGAGGAGGACAGCAACATCTCGCTGCTGCTGTGCGAGGAGACCATCCCCGGCTCCCCCGCGCCCGACGCCGAGCCCGCGCCCCCTCGACAGCGCCTGCACATGCCCTTCGCCTCCGCGCCGCCGCACCATCATGTGCATTCTAAAGATGAACGTGGCGCACGTGGCGAGGGTGCGTGTCGTGGCGCCAACCCCAGTCCAGCGACGGGACCGGCAGGCACGGGGTCAGCGGGGGTGGTGGGGGTGCCAGCTGGCGGGGGAGTGGCGGCGGGGGCGGGGGCGGTACCGGCCGAGCCCGAGGTGGAGCCGGTGCCGGCGCCGGGCCCGGGCTGGGGCCGACGACATGCGCTCATCGACAACACGCCTCCCACCACACCGGACAGCAGCCTCGACATGTCTCCCAGAGAAAGGCGGATATCTGAGCGCGACAGTCCGTCCGACCGCAAAGACGATGAAGATGAAGCACGAGCGAACGATGGGGCTCTCGATATGGATAAATTGCACGGTGGGCGGTCGCGTAAGGCGTCTGAGTGTTCGGCGGCGGGTGGCGGCGGAGGGGGTGCGGGCGGCGGTGGTGGCGGGGGCGCGGGGCGCGGGCGCGCTCGTCGCGTGCGGCGCGACACGGACGATCACCACAACGTGCTCCACACACCGCTCAAGTACAACTTCTACGTCGATCTCGATCCATCATGGGACTGTCAAACTCGTATCAATGTGCTAACGTCACGCCTCGCGGACTTGCGGAAGGTGTATCATTCTGTGAAGGCAGAACTCGCTGCGATCGACCGCCGTCGCAAGAAGCTGCGCCGCAAGGAGAGAGAGGCTGTCAAAGCAGCGAAGGCGGCGTGTTCATGA
- Protein Sequence
- MVSLKAGGGSVTVNDDVIKGTLRVGSTVEVKQDPKKDAMEAVITKIQDCSQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQLPLTHPEHFSTPVIAGRRGRRGRAQSEESEGEGPSRRVKDSAEREPHVGRVVLVEAAGGGERRRPHQPHQPAFPALVVAPTAQIKVKEDYLVRSFKDGRYYTVPKKEAREFRKGSAPLEWAGVEAALQYLNQQVLPPHWDRDALFNEPRNTSDDSSDDEPREEKDHFVAQLYKFMDDRGTPLNRNPTIANKDIDLYRLFRVVHKLGGYNRVTNQNQWKTIADKMGFHSVTTNISNLCKQAYKKFLHSFEEFYRKLGVTLVAHPRGARTPPAGRSLIRDRDRHPPPSASATTTASTSASTSALASAPTPASASASASASTPTSTPSHTQRGKDKDSDKSETDKSEKEEKIEKSERVKEKPRASDGEDSADNQPLISAAPKIDKEKEKEREKEKEKEKEREKEKEKYKEKEKDKDKDKNKDKEKDKDKDLDKEKDKDKDKDKEKEKEKEREKREKSSSTTTSEEKTVLKPRSQSKGRIILSTKTDSHDKRTPKRRPLSSKSESASTSTSRASRRPHVSTDSDSSGRASRCGPTKKMQSRRSQSANSASSGNTIASNSSKRPRKRKNTEPSATETTHTRISNVKAEVGDKLKVYYGPTQSESKVTYEAKVIEISPEGMLRVHYTGWNTRYDEWIKPQRIALNVTQHEARNKKGTSSSRRVRAKRTEESSALSDSDSDSDSDEDVKRSSKKSDDKSRSKTPSRSKDAKSSDSSSSNKPRKRSARNISTPTNASPAKKPRTSVSSHQGRDYDLIEIRSELKGLQTVKQEPEETTVISETVEKETAVTSAPATAPSEPPRPEKQPEDVYEFKEPEPFELELHDEKKKRTHRIFDDISPSKYTSTLSKSLSEEISEDPLKPRPSSLRSPSLSPYRDYGNIREPGRQSPEDDSKDCLFSLDDDSFPGDGSSGPTFEGFTPAKNQETYSKKSKVSKLRELIDDSPDSPADDEQSSDDDQDMIIKEAEDEDREAKPVIPPVVEKQKSPEQTAKEEIQIPESTQEIEQLTEEVPEIEEEPIEISIPELSTTLSPAKDLAIIVTAIPSFVTSTVTITAPEEEPIKMAVSELSVPPVVIVAPPAENVKESILTITIDKKLDPEPVISKFEPPSSPLIDTEEDKSEPDSPARIDVIPDPPPAFLLQSEGPKIAEKLLKAISSAKRLSMSPPPMDDRSETPKTDPLKLNKPDIKISSLSPEPRSVTLKSESIKSLPKIEPKKVRTPEIGDSIFGEPSKLTDAKRDSADIKKVKPKEATPPRLQSPLNILERRRSVAELTLPVPGKNNKVLSDTIQKLSSQINQAAAAVTAIQLPPFPTEDRSESSDSDDSDRRLIIDKLSAEDWGSGGSSEPSRSLTVPGMVGVGGLGGVSAVSAVASASVRALHAGKSPGEWSAGESLLMLEDACKNERKHSASVVVAGSGRVVATAGVISSTVSSVVSSAASVASVTACEEDSNISLLLCEETIPGSPAPDAEPAPPRQRLHMPFASAPPHHHVHSKDERGARGEGACRGANPSPATGPAGTGSAGVVGVPAGGGVAAGAGAVPAEPEVEPVPAPGPGWGRRHALIDNTPPTTPDSSLDMSPRERRISERDSPSDRKDDEDEARANDGALDMDKLHGGRSRKASECSAAGGGGGGAGGGGGGGAGRGRARRVRRDTDDHHNVLHTPLKYNFYVDLDPSWDCQTRINVLTSRLADLRKVYHSVKAELAAIDRRRKKLRRKEREAVKAAKAACS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01358668;
- 90% Identity
- -
- 80% Identity
- -