Lstr003018.1
Basic Information
- Insect
- Laodelphax striatellus
- Gene Symbol
- RCOR3_1
- Assembly
- GCA_014465815.1
- Location
- CM025331.1:1953775-1983879[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.4 1.1e+04 -2.1 0.0 20 41 101 125 99 127 0.79 2 2 5e-08 0.00011 23.6 0.0 5 46 402 443 401 443 0.95
Sequence Information
- Coding Sequence
- ATGGCAATTCGGCTCTGGCTTTGTATCTGCCTAGTTCAAGATCTACTGCGTAGGACACTCGGAAGAACTTTGTCTTCTGCGCTCTGGAGAGCTTCAGTCACCCCTCGGCACAACTTCGTGTACAAGTCATTCAAAAAACTTTGGAATACAGTTTCAAATTCAGAAATCTTCAACCGCGTGTCGGCCGGCAACCTTATAGAATTCATTCTGGACACTCGGAAGAACTTAAGTCTTCTGCGCTCTGGAGAGCCTCAGTCACCCCTCGGCACAACTTCGTGTATAAGAGAAAAAATAAGAGTCGGTCGAGACTTTCAAGCAGTAGTTCCTGAATTGATCCCAGTTGCAGATCGCAGATTAGAACAATGTCCAGACAGAGCACTGCTCGTTTGGTCCCCCACAACAGATATTTCAGACACAAAATACAAGTCGATAGCGACGCTGGTGAAGTACTACTACTCGTGGAAGAAGACGCGCAGTCGAACCAGCCTGATGGACCGCCAGGCGAGGAAGCTGGCCGGAAGGAGTGCGGGGGGCGGCGGCGGGGGTGGCGGAGTTGGAGCGGGAGGCGGGGGCCAGGCTGGCGAGGAAGGCGGTGCTGCGTCCGATGCCAATTCCGAGATGGGCTCCAATACTGACTCGGATTCTGACGAAAAGAAATGGACAATCCACAGAGGCATTCGTCGCAAGAGCGGATCCCCCCCGCGAACCTCCACCTCCGAGGATCCATCCAAAGAAAAAGAAGGCGCAGCCGAGGGAGGAGGGGGCAAGACGAACGTGTGCTCCAACTGCGGCGTGAGCTGTACGAATCTCCAGCAGGCTGCTGGAAAAGGAGGCATGTGTGGCACCTGCCACACCCACTGGAGACGCACAGGCAACATTCGTCCGACAATAGGTCCGGTGAAGCCGCGCGACCGCCACACGCACATGGCGCTGCTGCGACACAAGCGCAAGCCGCCGCGCGGCATGTACATCAACCACGACGACCTGGTCGCCATGGCCAGCCAAGGTCAAGGTCAGGCGGGCGCCCAGGCCCACAGCGGCGGCGGCGACAACATGCTCAAGGCCATGGACCGCGAAATCGTCTCGCTCAAACGACAGGTTCAAAACAACAAGCAAGTGTTGTCGTCATTGAAAAGAAAGACTAGCGAAGGAATCGAATCGTTGCGACCTCCCGACACCAACAACCGAATCTGCACTCGGTGTACCAACGATGAACTGCTTCTAGCCGTGCAAGGCATGCGCAAGTACGGCAAAGACTTCGGCGCAATAGCAGAGGTGATCGGCACCAAGACAGAGGCGCATCTGCGCACGTTCTTCGTCAACTACCGGCGTCGCTATCACTTGGACGCCGTTCTAGTTGAGTACGAGGCCGAGCACGGGCCCATTGTCGACGCCAGCGAAAAGATGGAGGTGGAAAGCGGCGGCCCGCTAGCGGCGAGCGGCGACACATCGGCGACAGCCGCTAGTTCGCCGCTGGCGACTGGTGCCAGCAGTCTAGCAGCCGCCAGCACCGGCACTTCTCCGGCTGCCGCGCTGCCCAAAGCGGTCGCCGCAGCCGGCAAAACGCCAGTGGCTACCAAATGA
- Protein Sequence
- MAIRLWLCICLVQDLLRRTLGRTLSSALWRASVTPRHNFVYKSFKKLWNTVSNSEIFNRVSAGNLIEFILDTRKNLSLLRSGEPQSPLGTTSCIREKIRVGRDFQAVVPELIPVADRRLEQCPDRALLVWSPTTDISDTKYKSIATLVKYYYSWKKTRSRTSLMDRQARKLAGRSAGGGGGGGGVGAGGGGQAGEEGGAASDANSEMGSNTDSDSDEKKWTIHRGIRRKSGSPPRTSTSEDPSKEKEGAAEGGGGKTNVCSNCGVSCTNLQQAAGKGGMCGTCHTHWRRTGNIRPTIGPVKPRDRHTHMALLRHKRKPPRGMYINHDDLVAMASQGQGQAGAQAHSGGGDNMLKAMDREIVSLKRQVQNNKQVLSSLKRKTSEGIESLRPPDTNNRICTRCTNDELLLAVQGMRKYGKDFGAIAEVIGTKTEAHLRTFFVNYRRRYHLDAVLVEYEAEHGPIVDASEKMEVESGGPLAASGDTSATAASSPLATGASSLAAASTGTSPAAALPKAVAAAGKTPVATK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -