Lstr016557.1
Basic Information
- Insect
- Laodelphax striatellus
- Gene Symbol
- Arid5b
- Assembly
- GCA_014465815.1
- Location
- WOVE01037480.1:1-59187[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.4e-25 7.2e-22 78.9 0.0 1 89 307 393 307 393 0.95 2 2 9 4.6e+04 -3.9 0.0 70 85 873 889 861 890 0.57
Sequence Information
- Coding Sequence
- ATGGCCACAGATTATAAATTAATTGGGGTACCTTGCGGCCAACATGGGCCTTATACGTTTTATAAAGCATTCAAATATAGTAAAAATGGAAAAGCCAATATTTTGGCTCTTAGTGAATTCTTTTTTGTTAAAATGTGGAGTGATAATGACTTGATTAGCATTGGAGAGCTGCAATTACTGTGGGAGGATAAAAACACCGAACAAACTCTAGCAAGTCTACGGCTCTACATTCTTCCAGAAAACACCCCGGATGGTAGACAGGATTTCCATGGAGAGGACGAAGTGCTGGCCATAACTGAGAAGGTGGTGCTGCGCGTCGAGGATCTGCTGACGTGTCTGGCGGACGCGGCCGACTGGAGCTGGGGCCTGACGGCGGTCGCCAACCAGGACTGCAGCGGCAAGCGGCGACTGCAGAACGTGCAGCGGCCGCAGCTGCTCAACGACTGCACCGCCATCGAAATGGACGACATCGATAGTGAGAAGGAACTGCTCGATGCGCTGCACTGGGAGACGAGTATCGGTGTGGTGGTGCTGAGCTTCCCGCGCTACTGTCGCTACCGCGGCCTGCTCAAGCGACTGGAGGGCGTTCACAACAAGTGGCTGAGAACGGCGCTTGTCGTCGCCCTGGGCGGATTCACGGTGCCCTGTCGCAACACGCGCGTCCTATTCTGCAAGGACACCTTCGACTATCCGGACCTCGAGGGCCATGAACTGCTCTGCAATCATCTAGCACCGAAGTTAAAAGGACGACCTCGGAAAAAGAGAAAGATCTACAGCAACACGCCAGAAGGCTCGGAGTGCGAATCGGAGTCATCACAATCAACGACTTCCTCGACAAAGACGAAAGTCAGCATACCGTTGGAAAAGAGTCGGAATGGTCTCAGTCCTAGAAGAAGTACGCGAGGCACCGGCTCAATACAAGAGAAAGAGTTCCTTGATAAGCTGTTTGCTTTCATGAAAGGCAAAAATAATCCTATCACAAGGATACCCAGTATTGGCTTCAAAGAAATTGATCTCTATTCGTTTTACCATAAAGTTCAGAACTTGGGTGGGTATGACGCGGTGACGGCGGGTCGAATGTGGAAGTACGTCTATGAGGAGTTGGGAGGTGACCAGAACAGCACCAGTGCTGCCACCATTTCCAGGAGACATTATGAAAGGTTGCTATTGCCTTACGAGAGGCAACACGGAGGCAATCACGTGACGAGTCGATTGAAAAAGCAGAGCGGAGAGAGTTCGTCGGCTGCATCGACCTCCAGCTGCAATATGGCTGCTTCGACCAGTGGCTCGGCGGCCACTCCTGTCTCCATCATGTCGTCTCTCAACCTCAGCTCATCGGTTAGCATCACGCCCTCTGTCACCATCACTCCTAACCTGCCCAACAAACTGTCTGCTGCTGCTGCTTCGGAGAAAGTAAATGAGAAACGGTTGTCCAATAAAATCACATCTCTTAGAGGCATTAGATTGAAACCTGAAAAGATGCTAGTGGATACTGGGGGCGGAAAAGAGAATATTCCAGTTTCCAACAGTTCAAATCTTGCTTCCAAACCCGATCTGTCTTCAGAGCTGATTGACCTCTGCTCTGAAGATTCTCAGTCTCCTACCAAAGGAAACGTATCCGTGCAACCAACACTGAAGAAACAGAAACTGGAAATCCTGAAGGAAGGTGGGCTGGAGGTGACTCCGGTGACGTCATCTTCAGGAGTCAGCTCGACGTCAAGCAGTGTTGCCGCTTCTTCTGACGGCCAGAAGGCTGACGAAGGACGGCCGTCGGTCATCCGGCATCCGGTGCCCGAAACGTCCATCTCGACAGATAACGGTAGTCGGTCTGAAAACACCAGCAACAAACTCAGTATTAGGGTGCCGGAAATGAATCGAGCCTGCCTGAATATACCCGAAATCAATAGAAGTAAGCTGGTGGATTCAAAGTGTAAAACGTCGTCGCCCGATAGAGGCCGATCGAAAATCTCCATTATGGTGACACCTGATCTCTCGTCCATGTTTGCACCCCCCTCCGCTCACACCAGTAATGGTAGTTCAACGCAAAAAACCACCAACAGTATTAACGGGCAGCAACGGCTGTATCCCTCGCCGCCCGCCTCTCCTTGGGCCAAACGCACAATCTACGGCAATCCCAAGGACATTATTCAGCCCACCATAAAACGACCTGTGGCCGAGGAGGTGTTGGACTTGAGGATGAAAGGCAGCGCCGGTGAAAGTGAGGTGTCAGCCAAAAGTGTACTGCCCAATCGCCAGATCGGCTCCAATTTGGAGATCACACTTGTGCCGACCAAAATGAGCGGACTGCCGCCTCCGCCTGTCAGCAGTCCTCTTCCCGCCCCCACTGCCTCCCGGAGAAAGAAGTCGAGTCCCGCCCCCGCCCCGCATAGTTTCAGCAACGGCCATGTGGAAGCGGCACGGTCGCCGTCCTTGATTAAACAACCATCACATTCCCCCAGCCTCTACCAGTCTTCCCTCATTATACCCAACGTGTCATCCACAAATAACAGCCGGCGTAAAACTTCAACGGGGAAAAAGACAAACGCAGCCTCCCAGCAACAAATCAACAGCAGCTTTCCAATGCAGTTTGCAGGTGCGCAGAACAGCTACAAGATGAGCCCGGCGGCGGCGGCGAACGCTCTCGACTCGTTCTACCTGTCAGCGCTGTTCAACAACCTGCTGCCGCCGGCTGCATCTCCGGCCGCCGCGTTCGGCCCTGCAGCGCAGCAGCTGCAGCTCTACAAGGAGCTCTACTGTCGGCAGCTGGCCGCCGGCACTGCAGCAGCAGCGGCTGCCGATCCACTGCCCGAGAACTTCCCACGGCTGCTGCAGGACGGCTCCACTTCCATTACGCTTGTCGCCAACAATTCCACGCCCACTTCCAAGTGA
- Protein Sequence
- MATDYKLIGVPCGQHGPYTFYKAFKYSKNGKANILALSEFFFVKMWSDNDLISIGELQLLWEDKNTEQTLASLRLYILPENTPDGRQDFHGEDEVLAITEKVVLRVEDLLTCLADAADWSWGLTAVANQDCSGKRRLQNVQRPQLLNDCTAIEMDDIDSEKELLDALHWETSIGVVVLSFPRYCRYRGLLKRLEGVHNKWLRTALVVALGGFTVPCRNTRVLFCKDTFDYPDLEGHELLCNHLAPKLKGRPRKKRKIYSNTPEGSECESESSQSTTSSTKTKVSIPLEKSRNGLSPRRSTRGTGSIQEKEFLDKLFAFMKGKNNPITRIPSIGFKEIDLYSFYHKVQNLGGYDAVTAGRMWKYVYEELGGDQNSTSAATISRRHYERLLLPYERQHGGNHVTSRLKKQSGESSSAASTSSCNMAASTSGSAATPVSIMSSLNLSSSVSITPSVTITPNLPNKLSAAAASEKVNEKRLSNKITSLRGIRLKPEKMLVDTGGGKENIPVSNSSNLASKPDLSSELIDLCSEDSQSPTKGNVSVQPTLKKQKLEILKEGGLEVTPVTSSSGVSSTSSSVAASSDGQKADEGRPSVIRHPVPETSISTDNGSRSENTSNKLSIRVPEMNRACLNIPEINRSKLVDSKCKTSSPDRGRSKISIMVTPDLSSMFAPPSAHTSNGSSTQKTTNSINGQQRLYPSPPASPWAKRTIYGNPKDIIQPTIKRPVAEEVLDLRMKGSAGESEVSAKSVLPNRQIGSNLEITLVPTKMSGLPPPPVSSPLPAPTASRRKKSSPAPAPHSFSNGHVEAARSPSLIKQPSHSPSLYQSSLIIPNVSSTNNSRRKTSTGKKTNAASQQQINSSFPMQFAGAQNSYKMSPAAAANALDSFYLSALFNNLLPPAASPAAAFGPAAQQLQLYKELYCRQLAAGTAAAAAADPLPENFPRLLQDGSTSITLVANNSTPTSK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01353507;
- 90% Identity
- -
- 80% Identity
- -