Lstr012497.1
Basic Information
- Insect
- Laodelphax striatellus
- Gene Symbol
- Nfil3
- Assembly
- GCA_014465815.1
- Location
- CM025335.1:5373312-5392081[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-13 2.3e-10 41.6 2.7 1 53 87 139 87 147 0.92 2 2 0.0022 4.3 8.8 0.1 40 63 364 387 360 388 0.87
Sequence Information
- Coding Sequence
- ATGATGGTAGCAGAGTTTTTAGCGCGCCAGAGCGGCTCGCCAATCAACGGCGAGACGCCCTCTTCGCACCAGCAGTCGCCCTACCCCCACCCCCACCCCCACCCCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAATTCATCCCCGACAACAAGAAGGACGAGAGCTACTGGGACAGGCGGCGTCGCAACAACGAGGCAGCAAAGAGGTCGCGCGAGAAGAGGCGCTTCAACGATATGATACTCGAGCAGAGGGTTGTCGAGTTGAGTAAGGAGAACCATTTACTGAAGGCGCAGTTAGCGGCCATCAAGGATAAGTTCGGCATCAATGGCGAGACAGTGGTGAGTGTGGAACAAGTGATGGCCACACTGCCTACCAACGAGCAAGTGTTGAGTTTGGCGAAAAGGGCGAAATTGTGTTATGGGGGTCAAGATGGAGGCGGCAGTTCGCCGCCGCTGCCGAATTTGCCGCCACCGCCGCAGAATCTGCCGCCGCAGCATCAAGTGCCGGCAGTGCCGACGGCCGTCATCCACCGACCAATGGTCACCATGCCGCTGCCCTTTGGCCCATCATCGGCCTCCTCGTCCCCGCCCCCCTCCGACGAACTCTCCTACCCGTACCCGTTCCAGCCGGTGCTGCCCCCGCTGCACCCGCCCGTGCTCGAGGCGCCCAACAGCAGTGTGCTCAACCTGAGCCGGAGTCGCAGTCCGTTCGAGCTGTCCGGCGACGAGAGCTCTGTCCCCGTTGCCCTGGCCAACAACAGTCTGCCTCACAAGCTGCGACACAAGTCCCATCTCGGTGATAAGGAAGTTGCGACGGCACTGTTATCGCTGCAGACGAGGATCAAGACAGAGCCAGAGGTGGAGACGGAAGCCGAACCGGTGAACGAATGCGGCCGAGTGGGACACAGTGCGAGTCCGCCCTGGGATGCGGAGGGCAGCAGTGACGAGCGTGACTCGGGCATTTCACTGGGAGCTGAGCTGGCTGACGACTCGCATCTCAAATCCGAGGTGGCGAGACTCGCCTCTGAGGTGGCTAACCTCAAAAGTATCCTCACTCGCAAGCCGACCTCCCAAGCCCACACCTCATAA
- Protein Sequence
- MMVAEFLARQSGSPINGETPSSHQQSPYPHPHPHPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFIPDNKKDESYWDRRRRNNEAAKRSREKRRFNDMILEQRVVELSKENHLLKAQLAAIKDKFGINGETVVSVEQVMATLPTNEQVLSLAKRAKLCYGGQDGGGSSPPLPNLPPPPQNLPPQHQVPAVPTAVIHRPMVTMPLPFGPSSASSSPPPSDELSYPYPFQPVLPPLHPPVLEAPNSSVLNLSRSRSPFELSGDESSVPVALANNSLPHKLRHKSHLGDKEVATALLSLQTRIKTEPEVETEAEPVNECGRVGHSASPPWDAEGSSDERDSGISLGAELADDSHLKSEVARLASEVANLKSILTRKPTSQAHTS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -