Lstr023984.1
Basic Information
- Insect
- Laodelphax striatellus
- Gene Symbol
- cnc
- Assembly
- GCA_014465815.1
- Location
- CM025324.1:19475933-19490717[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.2e-17 1.6e-13 51.8 7.2 3 65 480 542 478 542 0.96
Sequence Information
- Coding Sequence
- ATGGGGCGCATGCCATACGTGCGAACGATGAGCATGGAACAACGCTGGCAAGACTTGGCCAGCCTTCTCAGTTTGCCCGATCCGAACCACCCCTACCACCATCACTACCATCATCCGCATCATCATGCGGCCAGCGCTCCCTATCCGGGCAGCTACCTGCACCCGCATGCCGCAGAATCAGCAGCAGCGGCTGCACGCAGCGGTGGAGGCAGTTCTGCCCTGCATCTGACAAATGCCGCCGCCTCTGCCGCCTCCCTTCCGCCACCGCCCCCTCTTACCCCTGCTGACGCTATCAACTCCAGCTCAGCTTACCCTACTCTAGGAAGCAATGGAAACTTCGGCTCAGCGGTGGCTACATCGATGAATCTAACCAATAGCAGCGAACCGACTGTCAGTGAAGCAACTGGAGCCTCGTTCAAAATGGAGAATCACGAATCTCTTTATTACTCGCCTATGTGCCCATCCGATTCAGGAAATAACACAAGTGAAATGAATCACACCACAGACGGTTTTCTTTCCTCGATTTTGAATGATGAGGATATCCAATTGATGGATATGGCCATGAATGAAGGAATGTACACTATGCGAATGCTGGAGGGAGGAAACGGAGGGGTGGCTGGAGGTGGAGTGGTGGGGAGTTGTGGGGGGCCAGCAGGGGTGACGGAGAGGGGGGGTGGCACCGACTCGGACAGCGCTGTGTCTTCGATGGGCTCGGAGCGAGTGCCCTCCCTATCCTCCGACACCGAGTGGATGGAAACCAACTCGGATTCCGGTCATACACCTGGCGATCACTACAACGATTATCACAGCAGTAAATACCGTTGGTACGACTACAGCTACCCGAACAGGCATCATGCTAGTTCATCGGATGGCGTGGTCGGTAGTGCATCTAGTCGCATTCATCCAGTTGCTCAAAAGAAACATCACATGTATGGAAAACGCTTCTTCCAAGAACAAGGGAGCAGTGCGCTGGGCCACGCATCCGGCTCGGGCCTGAAGTACGATTATGCGGGTGCCGGTGAGTGCGCCGGAGACGGCAGTGCGGTTGCGGGTGCGGTGCCGCCGCCCGGCGGTCTTCTGCCGCACTATCCAGGCTCCCCCCTCCCACACTCCAAGCAGCCTCCACCTCCCCCACCGCCGCCGCCTCATCCCGAAATGAAATACAGCTGCAGCATGATGAGGACTCCAATGGAGCATGTGGCTCACAACCACACCTACCATCTCCCTCCCGAACAGCCTGGCCTTATGCAGCAGAGGCCAATGTCAAGGGAAAAGCATAGAGGTAAGAAGGCTGAAGATGAGCACCTTACAAGAGATGAGAAGAGAGCAAGAGCACTGAATGTGCCCATCACCGTGAATGACATTATCAACCTGCCCATGGATGAATTCAACGAGCGGCTGTCCAAGTACGATCTGAGTGAATCACAACTCTCACTGATCAGAGATATCAGGAGGAGAGGCAAAAATAAGGTTGCGGCCCAGAATTGTCGAAAGCGCAAATTAGACCAAATAATGAGTTTAGCAGATGAAGTGAAGGAAATGAGGGACAGAAAACAGAGGCTTCTCAGAGAACACGACTTCTTGATTGCTGAGCGACAGAGAGTCAAAAACAAATTCAGTCAGCTCTACAGGCATATATTCCAGCTTGGTGAAGCTGCAAAATTGAAGCCAATGGAAGTTGAGTTGAAGAAGCTAGAAGATCTATCAGAATCTATTGTTCAGGATTTCGTTCAAATGAGAGAAAGAGAAATAGAAATGCGTGATACTAATGCCAAATCTTATGTGGCAACACTGGGTTGCTGCCTGAAGGCAGATAGAAGTTGCTCAATGGGCTCACAACCTTACATCCACGGAGTGGCTACTTCCACGTTCGTGGATTACTTTGCGGCGGGCCTTAGTATTCCATGGCCACAGGAATCGACCAACAACAGAGTGCTGTACTTCAGCATTTTCAGCATGTGTTGCCTGCTAGGCCTCGCTACATGGCAAGTGCTCTATTTGCGGCGATTCTTCAAAGCCAAGAAACTCATCGAATAA
- Protein Sequence
- MGRMPYVRTMSMEQRWQDLASLLSLPDPNHPYHHHYHHPHHHAASAPYPGSYLHPHAAESAAAAARSGGGSSALHLTNAAASAASLPPPPPLTPADAINSSSAYPTLGSNGNFGSAVATSMNLTNSSEPTVSEATGASFKMENHESLYYSPMCPSDSGNNTSEMNHTTDGFLSSILNDEDIQLMDMAMNEGMYTMRMLEGGNGGVAGGGVVGSCGGPAGVTERGGGTDSDSAVSSMGSERVPSLSSDTEWMETNSDSGHTPGDHYNDYHSSKYRWYDYSYPNRHHASSSDGVVGSASSRIHPVAQKKHHMYGKRFFQEQGSSALGHASGSGLKYDYAGAGECAGDGSAVAGAVPPPGGLLPHYPGSPLPHSKQPPPPPPPPPHPEMKYSCSMMRTPMEHVAHNHTYHLPPEQPGLMQQRPMSREKHRGKKAEDEHLTRDEKRARALNVPITVNDIINLPMDEFNERLSKYDLSESQLSLIRDIRRRGKNKVAAQNCRKRKLDQIMSLADEVKEMRDRKQRLLREHDFLIAERQRVKNKFSQLYRHIFQLGEAAKLKPMEVELKKLEDLSESIVQDFVQMREREIEMRDTNAKSYVATLGCCLKADRSCSMGSQPYIHGVATSTFVDYFAAGLSIPWPQESTNNRVLYFSIFSMCCLLGLATWQVLYLRRFFKAKKLIE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -