Lsuf003402.1
Basic Information
- Insect
- Lampropteryx suffumata
- Gene Symbol
- GATA-B
- Assembly
- GCA_948098915.1
- Location
- OX402545.1:22729999-22731659[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.1e-18 2e-14 53.8 3.9 1 34 91 123 91 125 0.97 2 2 4.8e-18 2.3e-14 53.6 5.6 1 34 159 191 159 193 0.97
Sequence Information
- Coding Sequence
- ATGTTCTCGTACGTGCCGTTTGAGCGTCACGTGGCGCGCGTGAATCACCCAATGCCAAGGTCGCGCTCCAGCTCGGGCTCGGGCTCGAGCCGCAGACGGCGCTCTCCGGGACCGAACCGCTTCAAACGTCTAGACGACATCGGGCCTCTCCTCTTATGTATTGTCACACTGGAGTCGGACGCTCGGCGGACGCTGAGAGCGCCCGCGGTATCGCTAACGGATGTGTGTTGCGCAGTCGAGATGGCGGAGTTTTTCACGGAGGGACGCGAGTGCGTGAACTGCGGAGCCATCCACACTCCGCTGTGGCGCCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGGTTGTACAACAAGATGAACGGCATGAACCGCCCGCTGAAGCAGCCGCGGCGGCTGGTACGTCAGCGCAGCGCATCGCACGCGCCGCTCGCGCCGCACGACATGGGCAGCAAGCGGCCCGGCGTGGTGTGCACCAACTGCCACACGAGCACCACGTCGCTGTGGCGCCGCAACGTGAAGGGCGAGACGGTCTGCAACGCGTGCGGACTCTACTTCAAGCTCCACAACATCAACCGACCGCTCGCCATGAAGAAGGACTCGATCCAGACTCGGAAGCGGAAACCGAAGAACAGCAGCATCAAAGCGGATCGAAACCTCAAAAACACGATATCGCGCGCCGTGTCGTCGGGCAACGTCAAGATCGAGAACTTGCTGGAGAGTGAGGCTCGTGGCGCGGGCAGCGCGGGCGAGGCGCGGTACTACGTGCAGCACGCCCTGAAGCTGGAGCAGCCGCCTCCCGCCCACCTGCAGCAGCACGCCCTGTACGAGGAGCTGGACTACCGACGCGCCGACCTCGCCGCCGTCTCGCTGGCCAGCTGA
- Protein Sequence
- MFSYVPFERHVARVNHPMPRSRSSSGSGSSRRRRSPGPNRFKRLDDIGPLLLCIVTLESDARRTLRAPAVSLTDVCCAVEMAEFFTEGRECVNCGAIHTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRSASHAPLAPHDMGSKRPGVVCTNCHTSTTSLWRRNVKGETVCNACGLYFKLHNINRPLAMKKDSIQTRKRKPKNSSIKADRNLKNTISRAVSSGNVKIENLLESEARGAGSAGEARYYVQHALKLEQPPPAHLQQHALYEELDYRRADLAAVSLAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -