Basic Information

Insect: Lampropteryx suffumata
Gene Symbol: -
Assembly: GCA_948098915.1
Location: OX402569.1:8196176-8233520[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 8.1 7e+02 1.9 0.3 1 9 213 221 213 235 0.67

2 14 1.1 95 4.7 4.3 1 20 288 307 288 309 0.93

3 14 0.043 3.7 9.1 0.4 2 23 325 347 325 347 0.95

4 14 4.1 3.5e+02 2.9 0.7 3 21 386 404 385 405 0.93

5 14 3.4 3e+02 3.1 0.9 1 19 851 868 851 870 0.78

6 14 0.019 1.6 10.2 0.8 1 23 883 905 883 905 0.96

7 14 0.11 9.3 7.8 0.8 3 23 912 932 910 932 0.96

8 14 0.0014 0.12 13.8 0.3 2 23 1035 1056 1034 1056 0.94

9 14 0.64 55 5.4 3.5 1 23 1071 1093 1071 1093 0.98

10 14 8.5e-07 7.4e-05 23.9 3.3 1 23 1099 1121 1099 1121 0.99

11 14 0.00016 0.014 16.7 0.9 2 23 1127 1148 1126 1148 0.94

12 14 0.0034 0.29 12.6 2.5 2 23 1155 1177 1154 1177 0.91

13 14 0.51 44 5.7 0.7 1 19 1182 1200 1182 1201 0.89

14 14 0.027 2.3 9.7 0.2 3 23 1214 1235 1213 1235 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	8.1	7e+02	1.9	0.3	1	9	213	221	213	235	0.67
2	14	1.1	95	4.7	4.3	1	20	288	307	288	309	0.93
3	14	0.043	3.7	9.1	0.4	2	23	325	347	325	347	0.95
4	14	4.1	3.5e+02	2.9	0.7	3	21	386	404	385	405	0.93
5	14	3.4	3e+02	3.1	0.9	1	19	851	868	851	870	0.78
6	14	0.019	1.6	10.2	0.8	1	23	883	905	883	905	0.96
7	14	0.11	9.3	7.8	0.8	3	23	912	932	910	932	0.96
8	14	0.0014	0.12	13.8	0.3	2	23	1035	1056	1034	1056	0.94
9	14	0.64	55	5.4	3.5	1	23	1071	1093	1071	1093	0.98
10	14	8.5e-07	7.4e-05	23.9	3.3	1	23	1099	1121	1099	1121	0.99
11	14	0.00016	0.014	16.7	0.9	2	23	1127	1148	1126	1148	0.94
12	14	0.0034	0.29	12.6	2.5	2	23	1155	1177	1154	1177	0.91
13	14	0.51	44	5.7	0.7	1	19	1182	1200	1182	1201	0.89
14	14	0.027	2.3	9.7	0.2	3	23	1214	1235	1213	1235	0.94

Sequence Information

Coding Sequence: ATGTCTGATGCTAGGAAAAGATGCAGAAAATCTAAATTGGAAGTTCGCGATGATGATTGCGATTACGAGGTTGTGAGTGAGAACAATGACGAAACACCGCCTTTGCAGAAAATACCGAAATTTAATTTCCTGTCGCCACATTTCGGAATATTCGACCATGATTACTGTAAACGTGGTTTCCAAGGATATGCATACCCGCACTACCCTACTGAAACCAAGAAGTCCATACGGGGCAGTACCATCATAGCAGTACAGCAAACACAAGGCCCATCGGGGTCCATAGAGCTCTCAGTGAAAGTCGAAGCTGAACAGTTTGATGAAAAAGGCGACGAGATGGCGCTATTCCCTGAAACCCAGAAGGTTTTGTCAAAGAGAAAATCAAGAACAACTGGTAAACCTGCTATAAAAATGTGCAAATATGATCCTGAGGCTCTTCTTAAAAGTTCCTTGTCTATTGCTGCAAATTCGAACAACCCAGCAGATAGATTGTTAGATATCGAAATGAGGAATATGTGGGGGAATGTTCTATGTACACCAGAGAAAGTTGATGGCCATGAAGCAGTATTGCAAATAGCATTAGATTCCTGGCAGTTGTGGTACACACACTCAAAAGTGTTCCGGGATAGCCCACTGTTCTACCAATGCCATATTTGTGAGCTTGCTTGGTGGAGATTACAACCCTTCCGAGACCACATAAAAATCCATGACACGAAAGCTTTAAAAGTATCATTCAAAGAAAACATACACGAATGTATGATAATAGCGAGCAATGATTTCGTTGAGAAATTGAGGTTTTTTGATATTGCTGATGTTTGTTGGAAGTGTGGGAATGATTTGGAATTCCACAAGGATTCCTCAAAATATACATGTAGTCGGTGTCATAAATCTTTGTACACATGCTCGGCTTTCAGTGACCACGAATCAAAATGTCTATACAGAAACATAACTAACTTCAATGTTGGTATTAACAGGCAGTGTACGGTCTGTAAAAAAATTATGGATTCCGCACAACACCTTGAAAACCACATGGTCATAGCTCACTCCGTCCGCTCCGACCAACCAGTTTCTGTGACATACAAGACATGCACTCACTGTGAGTGCAAGTACTTTGTATACAGTACTCACAATTGTACTCGGAGCCCTAAGAACTCAGCCTGTGATCATTGCTGTAGGAAATTTGCAACGAAACCGCTCGCTATCGCACACATGTCCTCAAAATACAACACAACGGTTCAATGCAAAATTTGTGATGTCCTGATTGGAACTAAATGTCAGGAAATGGAGCATCTGTTGAAACATTCATATAACTATGACTTGGCTTATAAATGCACGATATGTTCGAACCAGTATCTGTTGTTTATCGATGAAATGTCAGTAACAATTCATAGAAGACTATGGCATCATCAGAAAAAGTTTGATAGACGGAGAGCATTTTATGAAAAGATGCTGGTACCTAAGCATTGTTTAGAAGACGGGGTTGAAGAAGCACTTGAACCTGATTCTACAGAGCTGCCGTCACAGGGCAAAAGTAATAGTACTGATGTTGTTGACTTGGATATTAAAACCACGTCCTCTGAGCAGCTGCACCTTGAAGTTCTATCAGCTAACGTTAATGTGACAGTAGACAAAGTTGACATCAAAAAAGAACCAGTAGAATATAGTGAAAACGGTGAAATAGATTACGAAGTAATGCTTCATAAGATGTTTAATGAAAGCAGCGGATCGCCAAGCAAAAAGACTCCTACTAAAGATACTAAAGAACCTAGAACTAATACTGAAGATTCTAGAAGTCATACTAAAGATCCTAAAACTCCTACTCAGATGCCAGATTCTGAAGCTCCTAATAAAGAAATCAAAATAGAATTTGATTTTAAGGATGTTAAGATCAAAAGTGAGCCTTTGGATGAAATTGATATTGTGGAGAATCCTGTTGAGACAGTAATAATCAAAACGGAGCCTGTTGATGATTCTCAGGAGTACAGAGAGTATCAGACCCAGAATGTAATGTATATGGAATATAAGACTGACAGTGAGAAACAGAGACAAGAAAAGAATCAAGAACAAGAAAATAAACAGAACCAAGAAAATAAACAGAACCAAGAAAATGGGAGCCTTGTGCCAAAACGTGAAGTGACTGAGGATCAAAAATGTGACGGTGAAAATAAGAATCAAAACCATGAAAGCGAAAGCAAGAATAAAAAAATTAAAATTGAGAAAAACAAAAAACTTAAAACTGTAAAGAAACAAAAATCATGTAAAAGCTCAAAAATAAAAAAAGTTGTCATAAAGAATAGTAATCAAGAAAATGATGAAATTGAAACATTAACTGTCAAAGTTGAACCTGACATTGACATGGATGACATACAATCAGAGAATATTGTCATAAAAAATGAAGTTGACGAAGACTCAACTGCCGACGACATATCAACCGACTCAATACCCTTCGACCAATTAATAACAGACTTAAATTTAACCAACGAAACCTTAAATCCTGATGAAATTTCATTCGACATTATAAATCCAAGCGGTGTATATAAAAAGAAAAAAGTGTATGCTTGCCATAAATGTGGCTACACGGCACAATTTAAGCAATACCGTACCCATGTAGTATCAAAATGCTCTGTATCTCCTGGTATCAACGGTAGTTATCCGTGCTCTAAGTGTGGTTTGACCTTTGTGATGTTCAGGAACTATGTGTTACATTTCGATACCCATGGATACGAGGTGATGGCATGTCCTAAGTGTAGTTTAGTGTTTGATACGCTACTTAAACTGTTGTCACACGTCCATAAGCATATTAAGAATAACTTTGTCGGATTACATGTGTTAGACCGAGGAGGTGAAGAATCTACAAGGTTGAAAAAACAACTTAAATGCCAAGAGTGTCGCGAGGTAATACTACAAAGAGATTCGTTTATACACTGGGAAGGTCATTTATCACTGAAAAAAGCACCTGTTAAAACAGTTCCGGAACCAATAATCGATGTGAAAGGAGAATTAACAGTGGACTGTGAACGAGTGACTATGAACAACAAAACGCTGGACAAAACAGCGTTGAAGCAAGCTGTGGATCATCTTCAATCAATAAATGTTACAGAAAAAGAATGCGTTATTTGTTACCGTGCGTTCTCAAGACGGTATGACGTGAAACGACATATCGTAGAGCATCTACTTATGGACGCACATATGAACAAATATAAGCATAAGTGTTTCCGATGTCAGATCTGCTTAGAAGGGTTCCAGCATCAGGAGAAATACAAGTTCCATATGAGAGAACACGGTTCTATGCCGATATTCAAGTGTGAACTATGCAACAAGACATTTAGTGACTCAAGTAACTTCGCGAAGCACAAGAAGACCCACAACGTGCGAGTGCTCGTTTGCGATCTTTGCAACAAGAAGTTCCATTCGCGAAGCGCGCTCGAGAAACACATAGCGGATCACATGAACCTGCCTAAGACGAAATGTGCCTTTTGCGAAAAGACATTTATCAGCAAGCAGAATTACAAGCGGCACAAGTACCAGGTGCACGTGACGAATAAATACAAATGTGTTTTGTGTGACATCAAATTTACCAGCTTACAGCACAAATGGGACCATAACTGGGAGGTGCACAAAGAAAGGAAGCAAAATGCAGATTGCCCAATATGCCTGAAATCCTTCCGTAAGTTCCAAGATGTCAGAATCCATGCCCGAGCTGAACACCGGGCTGAGGTTCATCCGATGAGACAAGGCCGGGGCAGTGACCTACAGTACTATAAGGTCAAAGGTCTGAAGAAGGTAGAACAGGAACGAGTAAATGACCTCGCGGATTAG
Protein Sequence: MSDARKRCRKSKLEVRDDDCDYEVVSENNDETPPLQKIPKFNFLSPHFGIFDHDYCKRGFQGYAYPHYPTETKKSIRGSTIIAVQQTQGPSGSIELSVKVEAEQFDEKGDEMALFPETQKVLSKRKSRTTGKPAIKMCKYDPEALLKSSLSIAANSNNPADRLLDIEMRNMWGNVLCTPEKVDGHEAVLQIALDSWQLWYTHSKVFRDSPLFYQCHICELAWWRLQPFRDHIKIHDTKALKVSFKENIHECMIIASNDFVEKLRFFDIADVCWKCGNDLEFHKDSSKYTCSRCHKSLYTCSAFSDHESKCLYRNITNFNVGINRQCTVCKKIMDSAQHLENHMVIAHSVRSDQPVSVTYKTCTHCECKYFVYSTHNCTRSPKNSACDHCCRKFATKPLAIAHMSSKYNTTVQCKICDVLIGTKCQEMEHLLKHSYNYDLAYKCTICSNQYLLFIDEMSVTIHRRLWHHQKKFDRRRAFYEKMLVPKHCLEDGVEEALEPDSTELPSQGKSNSTDVVDLDIKTTSSEQLHLEVLSANVNVTVDKVDIKKEPVEYSENGEIDYEVMLHKMFNESSGSPSKKTPTKDTKEPRTNTEDSRSHTKDPKTPTQMPDSEAPNKEIKIEFDFKDVKIKSEPLDEIDIVENPVETVIIKTEPVDDSQEYREYQTQNVMYMEYKTDSEKQRQEKNQEQENKQNQENKQNQENGSLVPKREVTEDQKCDGENKNQNHESESKNKKIKIEKNKKLKTVKKQKSCKSSKIKKVVIKNSNQENDEIETLTVKVEPDIDMDDIQSENIVIKNEVDEDSTADDISTDSIPFDQLITDLNLTNETLNPDEISFDIINPSGVYKKKKVYACHKCGYTAQFKQYRTHVVSKCSVSPGINGSYPCSKCGLTFVMFRNYVLHFDTHGYEVMACPKCSLVFDTLLKLLSHVHKHIKNNFVGLHVLDRGGEESTRLKKQLKCQECREVILQRDSFIHWEGHLSLKKAPVKTVPEPIIDVKGELTVDCERVTMNNKTLDKTALKQAVDHLQSINVTEKECVICYRAFSRRYDVKRHIVEHLLMDAHMNKYKHKCFRCQICLEGFQHQEKYKFHMREHGSMPIFKCELCNKTFSDSSNFAKHKKTHNVRVLVCDLCNKKFHSRSALEKHIADHMNLPKTKCAFCEKTFISKQNYKRHKYQVHVTNKYKCVLCDIKFTSLQHKWDHNWEVHKERKQNADCPICLKSFRKFQDVRIHARAEHRAEVHPMRQGRGSDLQYYKVKGLKKVEQERVNDLAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -