Basic Information

Insect: Lampropteryx suffumata
Gene Symbol: -
Assembly: GCA_948098915.1
Location: OX402574.1:3362871-3365083[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.063 5.4 8.6 0.3 1 23 54 77 54 77 0.94

2 15 0.96 83 4.8 0.6 2 23 103 125 102 125 0.94

3 15 0.00076 0.066 14.6 2.3 2 23 148 169 147 169 0.96

4 15 0.0017 0.14 13.5 1.4 1 23 173 195 173 195 0.97

5 15 0.11 9.5 7.8 1.2 1 23 199 222 199 222 0.95

6 15 0.025 2.1 9.8 3.7 1 23 228 251 228 251 0.96

7 15 0.11 9.6 7.8 2.3 1 11 258 268 258 271 0.91

8 15 0.69 60 5.3 4.4 1 23 320 343 320 343 0.92

9 15 4.3e-05 0.0037 18.5 0.3 1 23 412 434 412 434 0.98

10 15 0.0068 0.59 11.6 0.1 1 23 438 460 438 460 0.96

11 15 1.9 1.6e+02 3.9 1.0 2 23 465 487 464 487 0.89

12 15 0.0009 0.078 14.4 3.3 2 23 492 514 491 514 0.96

13 15 0.0097 0.84 11.1 2.3 1 23 520 543 520 543 0.93

14 15 0.00074 0.064 14.6 0.9 1 23 549 572 549 572 0.96

15 15 1.1e-05 0.00096 20.4 3.9 1 23 578 600 578 600 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.063	5.4	8.6	0.3	1	23	54	77	54	77	0.94
2	15	0.96	83	4.8	0.6	2	23	103	125	102	125	0.94
3	15	0.00076	0.066	14.6	2.3	2	23	148	169	147	169	0.96
4	15	0.0017	0.14	13.5	1.4	1	23	173	195	173	195	0.97
5	15	0.11	9.5	7.8	1.2	1	23	199	222	199	222	0.95
6	15	0.025	2.1	9.8	3.7	1	23	228	251	228	251	0.96
7	15	0.11	9.6	7.8	2.3	1	11	258	268	258	271	0.91
8	15	0.69	60	5.3	4.4	1	23	320	343	320	343	0.92
9	15	4.3e-05	0.0037	18.5	0.3	1	23	412	434	412	434	0.98
10	15	0.0068	0.59	11.6	0.1	1	23	438	460	438	460	0.96
11	15	1.9	1.6e+02	3.9	1.0	2	23	465	487	464	487	0.89
12	15	0.0009	0.078	14.4	3.3	2	23	492	514	491	514	0.96
13	15	0.0097	0.84	11.1	2.3	1	23	520	543	520	543	0.93
14	15	0.00074	0.064	14.6	0.9	1	23	549	572	549	572	0.96
15	15	1.1e-05	0.00096	20.4	3.9	1	23	578	600	578	600	0.98

Sequence Information

Coding Sequence: ATGTGCGTTTTCTTTTTAGGTGCCAAACGTCTCGAGCCTGTGGCGACCGACGAGGCATCCCCAATCACACGCATTAAACAAAACAGATTGATAAAGATGAACGCCATCACTATTCTGCAATACTCAAACGTGGTCCCCTTTAAATGGCACAGGCAGTGCTATCTCTGCTTCTATTGTAACTTCCCACTGAACACATTCGACGCTCTCAGAGTACACGTGACAACCGAACATAAAAACACTAACATTAGATCCATAGGCATACTAATGAAGAAAGACGATAAAGTGAAAATTGATGTCGCGTCTATGAGCTGCAAAATTTGTGAAACTAAACCTAAAAACTTGGAAGATCTTGTAGATCATTTGAAGCATGTGCACAATAAAGTATTTCACGATAATATGGGATACGGGGTCATGCCGTTTAAGCATAGCGCCGGCACGTGTCAGTGCGCTATATGTGATGAGACCTTCCAATACTACATTAAACTTAACCAACACATGAACAAGCATTACGGACAACACGTGTGTGAAGTGTGTGGAAAATCCTTCCTAAGTAGCAGACGACTCACGATCCACAGACTCTCTCACGGCTCTGGGTTTCCTTGCAACAGTTGTCCAGAGACATTCGACTCCTACACTAGAAGGAAGAACCACTACGCGACAACACATAACATATCAAAGGCCCACAAGTGTTCCTACTGCTCCGAAACTTTCCCCAACTACGGCGCAAGAACGCTTCACCATAGATACGCTCACAACATTGACACGCCCATATTCAACTGTCCTGTTTGCGGCAAGACTTTTCGTATTTGCAGTGGCAATGGATACCCCGTACCCGCGAAGCCCCTGGCGCCTGTTATGTCACTATCAACCACAATGCGCAATCGCTTAGTGAAACGAAATGCTACTATTATCCTACAGAGTAGCACAGCCATCCCGTTCAAATGGCAAAGGCAGTTCTACCTGTGCTTCTATTGTCACAAACAGTTTCAAGTCTTCAACGATCTCAGGGAACACTCTTATACCAAACACGAAATCTCAAGCGTTAAATCATCTGTATTGCTTTTGCGGGTGGACCCTTTAGTAAAAATCGATGTCGCGTCATGGGCCTGCAGGTTTTGTAATTTTGAACCTAAAACTTTAGATGTTATGGTTGAGCATTTAAAACTCATCCACAAACTGGTATTTGAAGACGCTGAATACGGTGTCATACCGTACAAACATCAACCTGATTCGTACGACTGCGGGATTTGCGACGAGAGTTTCGCGTACTTTGTGAAGTTGAACCAGCACATGAACAGTCATTACGGGAAGTATGTGTGTGATACGTGTGGCAAGTCTTACCTCAGTACCGACAGGTTGCGAGCCCACGCATTAATTCACATCAGCGGCGTCCGCTGCGAGTTCTGTCTGGAAACTTTCCGTACATTATCTATTAAAAAGTCGCATGTCAACAAAATGCATGAGCCGAAAATCAAATGTCAGCATTGCACAAAAACTTTCTCGAGCTACAATCAGAGAAAAGTTCATCTTAAGATTGCTCATAACGTTGGTGCGTTGCACTCTTGCCCTGGCTGTGGTAAGGAGTTCTCGTGCAATAGCAGAATGGAGCAGCACTTGAAAGACGTGCATTATAAGGAGAAACGTTTTAACTGTTCCATATGCGAGCGACAGTTCTACTCAAACTGGCAAGTGACGAAACACGTTCGGTTGAGTCACACTGGTAGGAAGGTCCATCAATGTGAGATTTGCCAGAAAACCTTTGTTGGGTCGAAGACTTTGCATGCACATATGAAAACGCATAACGACTCTGCACTTCCAATGTGA
Protein Sequence: MCVFFLGAKRLEPVATDEASPITRIKQNRLIKMNAITILQYSNVVPFKWHRQCYLCFYCNFPLNTFDALRVHVTTEHKNTNIRSIGILMKKDDKVKIDVASMSCKICETKPKNLEDLVDHLKHVHNKVFHDNMGYGVMPFKHSAGTCQCAICDETFQYYIKLNQHMNKHYGQHVCEVCGKSFLSSRRLTIHRLSHGSGFPCNSCPETFDSYTRRKNHYATTHNISKAHKCSYCSETFPNYGARTLHHRYAHNIDTPIFNCPVCGKTFRICSGNGYPVPAKPLAPVMSLSTTMRNRLVKRNATIILQSSTAIPFKWQRQFYLCFYCHKQFQVFNDLREHSYTKHEISSVKSSVLLLRVDPLVKIDVASWACRFCNFEPKTLDVMVEHLKLIHKLVFEDAEYGVIPYKHQPDSYDCGICDESFAYFVKLNQHMNSHYGKYVCDTCGKSYLSTDRLRAHALIHISGVRCEFCLETFRTLSIKKSHVNKMHEPKIKCQHCTKTFSSYNQRKVHLKIAHNVGALHSCPGCGKEFSCNSRMEQHLKDVHYKEKRFNCSICERQFYSNWQVTKHVRLSHTGRKVHQCEICQKTFVGSKTLHAHMKTHNDSALPM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -