Basic Information

Insect: Lampropteryx suffumata
Gene Symbol: -
Assembly: GCA_948098915.1
Location: OX402556.1:16262518-16275689[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 1.3 1.1e+02 4.4 0.1 3 23 110 130 108 130 0.96

2 18 0.00023 0.02 16.3 0.4 2 23 134 156 133 156 0.91

3 18 0.48 41 5.8 0.4 3 23 409 430 407 430 0.95

4 18 0.14 12 7.5 0.3 1 19 438 456 438 458 0.95

5 18 0.011 0.97 10.9 0.7 2 23 469 490 468 490 0.96

6 18 3.8 3.3e+02 3.0 1.5 1 23 506 529 506 533 0.81

7 18 0.0043 0.37 12.2 1.8 1 23 538 561 538 561 0.98

8 18 9.7 8.4e+02 1.7 2.5 8 23 613 629 610 629 0.94

9 18 0.064 5.5 8.5 1.9 1 22 638 659 638 661 0.82

10 18 8.7e-05 0.0075 17.6 3.1 1 23 695 717 695 717 0.98

11 18 4e-06 0.00034 21.8 1.7 1 23 724 746 724 746 0.98

12 18 4.3e-05 0.0037 18.5 1.4 1 23 751 773 751 773 0.96

13 18 0.0009 0.078 14.4 1.8 1 23 779 801 779 801 0.97

14 18 2e-06 0.00017 22.7 1.6 1 23 807 829 807 829 0.98

15 18 0.00017 0.015 16.6 4.0 2 23 836 859 836 859 0.95

16 18 0.0019 0.17 13.3 0.6 2 23 869 891 868 891 0.96

17 18 0.0081 0.7 11.4 0.5 1 23 896 918 896 918 0.97

18 18 0.00057 0.049 15.0 2.3 1 23 924 947 924 947 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	1.3	1.1e+02	4.4	0.1	3	23	110	130	108	130	0.96
2	18	0.00023	0.02	16.3	0.4	2	23	134	156	133	156	0.91
3	18	0.48	41	5.8	0.4	3	23	409	430	407	430	0.95
4	18	0.14	12	7.5	0.3	1	19	438	456	438	458	0.95
5	18	0.011	0.97	10.9	0.7	2	23	469	490	468	490	0.96
6	18	3.8	3.3e+02	3.0	1.5	1	23	506	529	506	533	0.81
7	18	0.0043	0.37	12.2	1.8	1	23	538	561	538	561	0.98
8	18	9.7	8.4e+02	1.7	2.5	8	23	613	629	610	629	0.94
9	18	0.064	5.5	8.5	1.9	1	22	638	659	638	661	0.82
10	18	8.7e-05	0.0075	17.6	3.1	1	23	695	717	695	717	0.98
11	18	4e-06	0.00034	21.8	1.7	1	23	724	746	724	746	0.98
12	18	4.3e-05	0.0037	18.5	1.4	1	23	751	773	751	773	0.96
13	18	0.0009	0.078	14.4	1.8	1	23	779	801	779	801	0.97
14	18	2e-06	0.00017	22.7	1.6	1	23	807	829	807	829	0.98
15	18	0.00017	0.015	16.6	4.0	2	23	836	859	836	859	0.95
16	18	0.0019	0.17	13.3	0.6	2	23	869	891	868	891	0.96
17	18	0.0081	0.7	11.4	0.5	1	23	896	918	896	918	0.97
18	18	0.00057	0.049	15.0	2.3	1	23	924	947	924	947	0.98

Sequence Information

Coding Sequence: ATGTCGTCAGATGACTCTGATGACGAACCCCTATCCGCATTAGCGGCGAGAAATAAAACAGACTATGAACTTGAAATCTTGCCTATCAGTGCAAGCAAAACTCGTAAAAAGAAAATCTACTCAATGAAAAAGGCCTGCAATGTAACAATAGAACTTCAATACAAGGATGAGCTTTCATCTGTTACTGTGGAGAGACCTTCTGATGTCTGGTTGTATTTGAAAGATTTGAATCCAAATGGGCCGTACAGCTGTTTGCTCTGTTCAGAATGGTTCATAAATAAAACTAAAATAGTAATCCACTATGTGGTCAACCATAAAAAAGATTTTTGTGGTATATGCAGATATTTTGTGCCTGACAGAGAAGCATGGCAAGACCACTTAAAGTTTCATATCCCTTGGCAATGTTCTCAATGCCCCAAAACGTTTAATAGTGAAGATCTGTTAAGAGCACACTTCAGTAACGAACACCAACTGGTTCACTGCCGACTTTGCCACACCCGATTACTTGATGGCAATGATTACCACTCACATTTGTATCAAAAACATAGTGTTACTAATGTATCTTGTAAAAATGAAGAGTGTTTTTGGGAGTTTGAGCAGGAAGACTTCAAGTTTCTTTGTATACTCTGCTCCAAGTCTAACAATGGTATACAAACTTTTTCTAACCATTACATGGCATACCATCATCTGACTCTGAAATGCTTAGCTCCTCTGATCTCAGGAAAGAATTGGAACTTTCCAGTTCATGGTGCTGAAGTCAGCATTGACTTTATTGAAAGACAACTCAAAGACTTTGATAAATATGGTTATTTAGATTTGGATAAAAAGCCAGACCGTCTGGTGGAAAAAGACGAAAGTGTAGCTCTTACGCGAGAGCCTCCTGAATTCCACACTGAAATGGTAAAGGAAGAAGTCATCAGTGAACCTGAGGATGTAACAGCTGATGATGATGATGGCACTGCTGATGATGATGCAGATAAAAAGGATTATGAACCCGGACCTGAAACAACGGATACCAATCTTAAGAGTGAACAGGAAGAGTTTTTAAAAACATACAAAGGAGATGAAGATTATGATACAACACAAGTAGAAATGATACCGTTGCAAAAATGTTACTTCAATTATATTGAAGACACTTTGAATAAGATCAACTCTCACACTATGCCGCAAATGTCGGTGATTAACTATGGATTAGCTGATGCCAATCATCCAGTCAGCATCGACTGTGAGCTTTGTAAATCTAATTACACAACACTACAGCCTTTTACTCAACACATGATAAAAATGCATGGCTTTAAATGTATGTCAACATTTTCATGCAGAGTTTGTGCTACAACCTTTGACAGCCATAACGAGTTAGAGCAGCATGAGGCCCAGGAAATGGGAGATTTTGAGGATCTGTGGATCTGTCAGTTTTGTGACCAAGAGTTTGATAATAGAGGTCAGACTAGAAAGCATTTGACCATGCACTGGGATATTATAGAGTATGATAATTGCTTTAGCCCCCATTTGGGGTTCAAGTGTAAATACTGCCCAACCTTGTTCTGGAACGAGACTGACAGGGAAAGCCATCTTGTGAGAGTACACTTCCAAAAGCATATTGAGGATTATTATAAGTGTGAGAGCTGTGATATGCTTTTCAGTGATAAGGTTTGGTTTATCCACCATTATCTGACAAATCACATGTTAAAAGAGCAAGACCTTGTTGGTTTGTACCTATTGAAATGCAGCTTCTGCTGTGCAGTGTACCAAGATGTGGTTGCAATGAGAAGTCACTTTAATGATAAGCATCCCGAGGCTAAAAGGGTTTTCTGTTCCGTGGATCCATGTAGATACAAGCCTTTCACTAATAGAAAGTCTTTCCATTTGCATTTAAAGTCGTTCCACGTGAACAAAAAGCGTGCGGAGTCGTTCGCGTGCCAGTACTGCGGTAAGGAGTTCAACAGCCGGCGGGCTTGCAGCGCGCACACGACACAGGCGCACGGACCCGGCAGGTTCTCCTGCAACATTTGTAAGGACATACTGCACACTGCCGATGAGAGAAAAATCCATTATCTTTTGCGGCATCCAGGACGCCATCCGTTCCAATGCCGTGACTGCGACAAATCATTTCAATACAAGTCGTCCCTTTACCTACACCGGAAAGAGCATGCGCCAAACAAACAAGACTATAAATGCAGCTACTGCGGGAAGATTTTCAAGAAGCGAGATTCATTCCGAGAACACGTTATGATCCACGAAGGACCAAAGCACGCGTGTTCGTACTGTCCGATGGTGTTTGTGCAACGTTCGAACATGTTGCGACATGAAAGACGGCATACAGGGGAAAGGCCTTACGCATGCCAGTATTGTCCTAAGACATTTTCTGATAAGGGAGCCTGCTCGTCCCATACGAGGATTCACCAGAAAGTGCCGGCGTTCCCTTGCATGTACTGCGGCCAAACTTTCGTGCAGAAGTCGAAACTGACCTACCATATCAGGAAACATACCGGAGAAAATCTTGAAACATGTACCCACATAAACTGCGGCAAGATATTTACGAGCCCGTGTTCGTTGCGTGAGCATATGAAAACACACCAGAAAAAACAAATTATGGAACCTGTCAAATGTCCACTTTGCTCGAAATCGTATCAAGATGAAAAGTACATGATGCGACATCTACGCGCCACGCATACCAGCGCCGAGTTCATCTGTCCTCTTTGCAAAAAGAAGCTGCATAGCGCCGCTTCTTTGAGAGACCATGTCGTTACGCACAGCACTGCTAAAGCTTATGTGTGCAACCAGTGCTCAAAATCGTACAACGTGAAACGCACGATGGTAAGACATCTACGGCGGCGCCACGGCCTCAAACACGCGGGAGAAAGTCTCTCAGAGTACTACAGTAAACTCGACCCTAGAGAATGTAACTTGGATCTCGATGATGAAACTATGACCAGCATATTTGGACCCCCGAAAAGAAAACTTACCGATGCAGTCAACTTTACTAACATCAGTAAAAAGTTGAAACTAGAACGGTTTAAGTGCAAAGAAACTTATAGTGACAATGACAGTGACAATACTAGACCGCATGATATAGAGAGTGTGCAAGTTAAGATAGAGTGTGAAGAAACCGAGGAATCTGAAAATTGTGAGGAGATACAGCCAACTGACTTTGTGAGTGTTAAGATTGAATGTACAGAGGAACATTGTGAAAATGAAATTGAAGAGGACTGA
Protein Sequence: MSSDDSDDEPLSALAARNKTDYELEILPISASKTRKKKIYSMKKACNVTIELQYKDELSSVTVERPSDVWLYLKDLNPNGPYSCLLCSEWFINKTKIVIHYVVNHKKDFCGICRYFVPDREAWQDHLKFHIPWQCSQCPKTFNSEDLLRAHFSNEHQLVHCRLCHTRLLDGNDYHSHLYQKHSVTNVSCKNEECFWEFEQEDFKFLCILCSKSNNGIQTFSNHYMAYHHLTLKCLAPLISGKNWNFPVHGAEVSIDFIERQLKDFDKYGYLDLDKKPDRLVEKDESVALTREPPEFHTEMVKEEVISEPEDVTADDDDGTADDDADKKDYEPGPETTDTNLKSEQEEFLKTYKGDEDYDTTQVEMIPLQKCYFNYIEDTLNKINSHTMPQMSVINYGLADANHPVSIDCELCKSNYTTLQPFTQHMIKMHGFKCMSTFSCRVCATTFDSHNELEQHEAQEMGDFEDLWICQFCDQEFDNRGQTRKHLTMHWDIIEYDNCFSPHLGFKCKYCPTLFWNETDRESHLVRVHFQKHIEDYYKCESCDMLFSDKVWFIHHYLTNHMLKEQDLVGLYLLKCSFCCAVYQDVVAMRSHFNDKHPEAKRVFCSVDPCRYKPFTNRKSFHLHLKSFHVNKKRAESFACQYCGKEFNSRRACSAHTTQAHGPGRFSCNICKDILHTADERKIHYLLRHPGRHPFQCRDCDKSFQYKSSLYLHRKEHAPNKQDYKCSYCGKIFKKRDSFREHVMIHEGPKHACSYCPMVFVQRSNMLRHERRHTGERPYACQYCPKTFSDKGACSSHTRIHQKVPAFPCMYCGQTFVQKSKLTYHIRKHTGENLETCTHINCGKIFTSPCSLREHMKTHQKKQIMEPVKCPLCSKSYQDEKYMMRHLRATHTSAEFICPLCKKKLHSAASLRDHVVTHSTAKAYVCNQCSKSYNVKRTMVRHLRRRHGLKHAGESLSEYYSKLDPRECNLDLDDETMTSIFGPPKRKLTDAVNFTNISKKLKLERFKCKETYSDNDSDNTRPHDIESVQVKIECEETEESENCEEIQPTDFVSVKIECTEEHCENEIEED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00119849;
90% Identity: -
80% Identity: -