Basic Information

Insect: Lampropteryx suffumata
Gene Symbol: rst2
Assembly: GCA_948098915.1
Location: OX402574.1:7160079-7186191[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.15 13 7.4 0.1 3 23 142 162 140 162 0.96

2 14 0.0022 0.19 13.2 1.5 1 23 262 284 262 284 0.99

3 14 2.2e-05 0.0019 19.4 0.9 1 23 290 313 290 313 0.97

4 14 0.11 9.2 7.8 5.9 1 23 318 341 318 341 0.93

5 14 2.3e-07 1.9e-05 25.7 1.8 2 23 520 541 520 541 0.97

6 14 0.00018 0.016 16.6 1.3 1 23 547 569 547 569 0.98

7 14 0.036 3.1 9.3 4.6 3 23 640 660 639 660 0.97

8 14 0.006 0.52 11.8 2.7 1 23 695 717 695 717 0.98

9 14 3.8e-06 0.00033 21.8 0.3 1 23 725 747 725 747 0.98

10 14 0.019 1.6 10.2 2.6 1 23 756 778 756 778 0.98

11 14 9.7e-05 0.0084 17.4 0.7 3 23 842 862 841 862 0.98

12 14 0.012 1 10.8 5.6 1 23 879 901 879 901 0.97

13 14 2e-06 0.00017 22.7 0.7 1 23 907 929 907 929 0.98

14 14 0.00058 0.05 15.0 5.4 1 23 935 958 935 958 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.15	13	7.4	0.1	3	23	142	162	140	162	0.96
2	14	0.0022	0.19	13.2	1.5	1	23	262	284	262	284	0.99
3	14	2.2e-05	0.0019	19.4	0.9	1	23	290	313	290	313	0.97
4	14	0.11	9.2	7.8	5.9	1	23	318	341	318	341	0.93
5	14	2.3e-07	1.9e-05	25.7	1.8	2	23	520	541	520	541	0.97
6	14	0.00018	0.016	16.6	1.3	1	23	547	569	547	569	0.98
7	14	0.036	3.1	9.3	4.6	3	23	640	660	639	660	0.97
8	14	0.006	0.52	11.8	2.7	1	23	695	717	695	717	0.98
9	14	3.8e-06	0.00033	21.8	0.3	1	23	725	747	725	747	0.98
10	14	0.019	1.6	10.2	2.6	1	23	756	778	756	778	0.98
11	14	9.7e-05	0.0084	17.4	0.7	3	23	842	862	841	862	0.98
12	14	0.012	1	10.8	5.6	1	23	879	901	879	901	0.97
13	14	2e-06	0.00017	22.7	0.7	1	23	907	929	907	929	0.98
14	14	0.00058	0.05	15.0	5.4	1	23	935	958	935	958	0.98

Sequence Information

Coding Sequence: ATGAACGCAAACATGATGGATATAGACCCGCTCAGCTCGTACAACCAATACAATACATACCAACCACCGTTTCAACCCCAACCTACTGTTCCTTCAACACAACCAAGCATACCCCTCACACAACCTAACATCTCCCCCTCACAACCCAGCTTACCTTACCCATACTACCCTTCACTACCTTTTACCCACAATGTTGAAGACATTTTAAGTCAATCGAACAGACAGCCAACTCAGCTGACACACTTCGGAGAAACAGATTCAATCATGGAACAAAATATATCTGAACCGGTTCAAGGCACAGACGATGAAGACATCAAGCCAGATATAACTAAAATTAAGCTAAAAAGGACAAAGAAGCCCGGAGGAAAAGTCAGCAGTTACTGGAATAAAAAGATTACGGATAAAGATTTCAAGTTCTTCGGATGTGCTGTATGCAATATATCATTTCGAGAACTGACCGAATTAGACTCCCATGTGACAATCCACAGCAACCGCATCACGAGCTACGATATCAGGATACACAACCAGAAGAGAAAGAGACTGCTGAAAAAGGAGAAGAAAAAGAAAAAGAAAGATGAGAAAGTTAAGAGCGAGTTTGATATTGAAATTAAGCCCGAAGATGGGTATATTGGAACGGAGGCAGCTCAGGAATTTAATAGCCAAGTTAACGTTCAAACAAAGGGTGCATCTAAGGGTGCAGCTAAGAGTGAATCTAAAGGGGGTAAAATTGTTAAAAGTAAAAAGAAAACAGCGGTCAAGTGTGGGAACGGCAAGAATGAAGTGTATAAGTGTTTTGCTTGCAATAGGCAGTTCGCTTTGAGTTACTATCTGAAGATACATGTCCGCTCTCATACAGATGAAAAACCGTATACATGTAGTTACTGTGGTCAAACGTTTATAACTGCAAGCAAACTCGGGCGGCACAACAAGAGAATACATCTAGCAATTCGCCATCAATGTAGGATATGCTTTAGATTCTTCAACAGATTTGAGTTACTCACCAAACATTTTGATAAAAAACATGCAGAACAAAAGCTAGAAGGAGAACCATATGATTACAACGCCATCTTACCATACATAACTGAACTAGAGGAGCAATTCAAAATGGAAGAGGAGGCCAAGAAACCTAAAACCGAGGACCCCTGGGATTGGCCTCGTGACATCTCTAATGAGGCCCCCGATGCGGCTAAGACTGAAGATACTAAAGTCGAGAAGAAAGAAGAATTGGATGTCCCGACAAAATTCGAGTTCGCGGATAACACAGCTAAAGAGAAAATCGAGGAGGTTGAAATTAAATGCGAACCAACGGATACGGAGGAACAGGAAATGGCTTCAGAGACACTTCCGGAGCCCGAACCCGAGCCCGAGCTGATCGACGACATCTTCACACCGCAGTCAGACTCCTCTGATGATGCTTCCGTGAAGGAAGAAAGATCGCCCCCTTCGGATGATGAGGATGAATACTTCCCCCCCGAAGGCTGGGCTCGCTCCCCCCCTCCCGAGTCCCCCCCACCGCCCCCCTCTCCCGAAGAAGTGAAGCGTAGGGGGGGGACGGGGGTCTGTAAGCTCTGTAATAGAAGCTTTAGCAGCAACTCGTACTTGAAAGTGCATATGAGGACACATACGGGTGAGAAGCCGTTTTCGTGTTACGTGTGCGGGCGCGGGTTCATAACGGCCAGCAAGATGCATCGCCACGTGCTCACACACGACGACACGTGGCCCGATGAAGACGGAATTAAAGCAGAGGGCGCTGATATCAAATCTGAAGTCGAAGATGATGATGATGATGACACAGTCAAAGAGAAAAAACATAAAAAATCGAAATCAAAGACAGAGAAAGCCAAGACAAAGCTACTAAAGAAACCGAAGAAGAAACTCATCGCTGGGGTCAAGAAAGGCAGAGGGAGGCCGAACTGTTGTGAATACTGTGGAAAAAAATTCCTACATGTGGAAACATTACAAGTTCACAAGCGGTCACACGAAGGCGAAGAACTTATTTACAAGTGTAATTTCTGTTTGGAACCTCAAATAGACCAGGAAGCGAAGATTGAACACGAAGCAACACACACAGGACCGAAACCTTATTATTGTACATTATGTGGAAGACATTACAAGGATCGAGGAGCCATGGTATACCACAGGAAAAACCATAAACCACAAAACGAGAAACTATTTATATGTGATATCTGTTCAAAGAGATTCAACTCTCAAGCGAAACTTGCGAGACATATCATCACGCACTCCAGTGAAAAATTTGTCCTTCGCTACGAATGCCCGGTCTGTGCCAACATGTTTCATACCCGATGGCATATGCAGATGCATCTTAAATCACATCAAAAAGAGGGACTAATACTAGAGGAAAATCGAAACGCAGTTCTAGCAATGGTGCTACAAAATGCGCGAAAGTTCCCCAAATCAAGCGTCCCCCTTTCCACAACAGAACAACCCCACGCATTACCCCATCCCATACCTCCCTTTCCTCTATTACCATCCCTGCCCAACCCCGAAGAGAGATCCAGGATATGCAACATCTGCGGGGAAGTGTTTCAACATTTCTACTACTTAGAGGAACATTTAAAGACACATGGAAACAAAATTGCTGTTGAAGATCTGGATAAGGAGGAAGAGAAGAAGTACACATGCCAGGTCTGCTCAAAGTCCTTCAAACTCCACTACTACTTAAAACTGCACAGTTTCACTCACACAAAGGAGAAACCGTTCATCTGCCAACAGTGTGGCAAGGGCTTTATAACTAAGGGCAAGCTCAAACGTCATCTGGAAACGCATCAAGGACTGAAGAAATATCAATGTCATATATGTTGCAAGTTCTTCACACGACCAAGTTATATGCGGATTCATGTTCGAACTATACATGGAACACAAGATTATAATTTCAGGGATTATGGTGTTGGGGTGCCGTTGGGTTTAGGGGCTCCTTTGGGGCATATAATGGATATGTGA
Protein Sequence: MNANMMDIDPLSSYNQYNTYQPPFQPQPTVPSTQPSIPLTQPNISPSQPSLPYPYYPSLPFTHNVEDILSQSNRQPTQLTHFGETDSIMEQNISEPVQGTDDEDIKPDITKIKLKRTKKPGGKVSSYWNKKITDKDFKFFGCAVCNISFRELTELDSHVTIHSNRITSYDIRIHNQKRKRLLKKEKKKKKKDEKVKSEFDIEIKPEDGYIGTEAAQEFNSQVNVQTKGASKGAAKSESKGGKIVKSKKKTAVKCGNGKNEVYKCFACNRQFALSYYLKIHVRSHTDEKPYTCSYCGQTFITASKLGRHNKRIHLAIRHQCRICFRFFNRFELLTKHFDKKHAEQKLEGEPYDYNAILPYITELEEQFKMEEEAKKPKTEDPWDWPRDISNEAPDAAKTEDTKVEKKEELDVPTKFEFADNTAKEKIEEVEIKCEPTDTEEQEMASETLPEPEPEPELIDDIFTPQSDSSDDASVKEERSPPSDDEDEYFPPEGWARSPPPESPPPPPSPEEVKRRGGTGVCKLCNRSFSSNSYLKVHMRTHTGEKPFSCYVCGRGFITASKMHRHVLTHDDTWPDEDGIKAEGADIKSEVEDDDDDDTVKEKKHKKSKSKTEKAKTKLLKKPKKKLIAGVKKGRGRPNCCEYCGKKFLHVETLQVHKRSHEGEELIYKCNFCLEPQIDQEAKIEHEATHTGPKPYYCTLCGRHYKDRGAMVYHRKNHKPQNEKLFICDICSKRFNSQAKLARHIITHSSEKFVLRYECPVCANMFHTRWHMQMHLKSHQKEGLILEENRNAVLAMVLQNARKFPKSSVPLSTTEQPHALPHPIPPFPLLPSLPNPEERSRICNICGEVFQHFYYLEEHLKTHGNKIAVEDLDKEEEKKYTCQVCSKSFKLHYYLKLHSFTHTKEKPFICQQCGKGFITKGKLKRHLETHQGLKKYQCHICCKFFTRPSYMRIHVRTIHGTQDYNFRDYGVGVPLGLGAPLGHIMDM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00377339;
90% Identity: -
80% Identity: -