Lsuf027594.1
Basic Information
- Insect
- Lampropteryx suffumata
- Gene Symbol
- Zfy2
- Assembly
- GCA_948098915.1
- Location
- OX402569.1:13981674-13988999[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 9.8 8.4e+02 1.7 4.6 5 23 165 183 164 183 0.96 2 15 9.4e-05 0.0081 17.5 1.3 2 23 200 221 199 221 0.97 3 15 0.0011 0.097 14.1 0.3 1 23 227 250 227 250 0.96 4 15 0.0018 0.16 13.4 1.5 1 21 256 276 256 277 0.93 5 15 2.8e-05 0.0024 19.1 0.5 1 23 288 310 288 310 0.98 6 15 0.00037 0.031 15.6 0.6 3 23 318 339 316 339 0.95 7 15 2.9e-05 0.0025 19.1 5.0 1 23 345 367 345 367 0.97 8 15 0.0046 0.39 12.2 2.8 1 23 373 395 373 395 0.97 9 15 2.1e-05 0.0018 19.5 3.3 1 23 407 429 407 429 0.98 10 15 4.8e-07 4.2e-05 24.7 2.9 1 23 435 457 435 457 0.97 11 15 0.011 0.94 11.0 2.4 1 23 463 485 463 485 0.97 12 15 0.00017 0.014 16.7 0.9 1 23 491 514 491 514 0.97 13 15 0.00078 0.067 14.6 8.5 1 23 520 542 520 542 0.97 14 15 1.8e-06 0.00016 22.8 0.6 1 23 548 570 548 570 0.97 15 15 0.00043 0.037 15.4 0.6 1 21 576 596 576 597 0.95
Sequence Information
- Coding Sequence
- ATGTGTGCGGCGACGATTTGCCGCGTGTGTCTCGGCAGCGAGATGCGCGTGCAGGCTGTGAGAGACAGCCGGCTGCGAGAGATCTACGAGAAACTCACCGGCTCCGAGCTGGAGACGGAGGACGGGCGGCCGAGTGCCGTGTGCGGCCCATGCGGCGGCCAGCTGCGTCGCTGTCGGCGACTGGCCGACGCGGCGCGCGCGGCCGACTGTCTGCTGCGAGACCTGCTGCTCACTCACACCAAGGTGACGAGCGAGGCAATCGGAACTCTAAACATTAGAATTCCACACCTAACTAAATCTACATTAAAATCCATATCCTTCGACGGCAACTCAATAGATGGCAGCACTTATACGGGCGACGGCGGCGTCGCCTTGAAACAGGAAACGAAAGAAGATACAGATACCCTCAAAATGGAAAACAGCTTTTTAACGGACGATACTGATATACAAAGCGATATTAAAACGGAAACGGATATCGACAACAACTTCCGTATGTGCCACAAGACATCTAAGACGAAAAAAGAATGTTTGACCCATCTGAGAATCCATAGCAGTACTTGCAAAAGTGAAATCATTCAAATAACGAACAAACAGACTCGATGTCAAGTGTGCCACAAAGACTTCTCCGAACCCAAAGCGCTGAAGTTACACATGAGCGTACACACAGGAGCCAAGCCATTCGTTTGCGATGCGTGTAACCAAGCCTTCCGTTTGAAGCAGAGCTTACAGAACCACATTACGGTCCAGCACACCAAAGAAAAGAAGTTCGCATGCGACACCTGCAGTAAATCCTTCTTTCACAAAAAAGGTTTGATCGCACACAAGAAGTCTCCAGCCTGCCGGTTCCCTGCGTATAAACCGTACGCGTGCGCTAAATGCAAGTCCGCGTTTTCTGATGCGGACTCGTTGAGACAACACAGGCGCACTCACGTTGGCGAAAGGCGTTACGGCTGCAGCAGATGCGACAAAGCGTTCACGATCAAACGATACCTTACTAAACATATTCTACAAGTCCATTCTCCCGATAAACCACATCCCTGCTTCAGATGCAGCAAGACATTCAAACAAACGAGCACTCTGAAGACTCACATGCGAGTTCACACTAGAGAAAAGCTCTTCGCTTGCAAATTTTGCGCTGAATCTTTCCTACATAATTCGTCTTTGAAGAGGCATCTACTTCGTCACTCGATGAACGCCGAGTGTTCGGATGAGTGGGTGTATTGCTGCGACCGATGCAGTAAGAAGTTTCGTTCCCAAGCCGGGCTGAAAGCGCACCTGAGGAGCCATACGGGGGAAAAGCCTTTCTGCTGCGATACTTGCGGGAAGCAGTTCAGTCAGAAGGGAAATTTACAGTTGCATATGAAGATCCACTTTGGGGAGAAGTGCTTCGCGTGCGAACGCTGCGGGAAGACTTTCCTACTCAAGTGTCAGCTGAAGATACATTATCAGGTTCACAGCGAAGAGAAACCGTACGCTTGTGCACGTTGCGAAATGACGTTCACTTTCAAAAGTGCACTCAAAGAGCACACTCGCCGACTTCATTCCGAAGTAAAAGCCTTCGCGTGCCACCGCTGCGGCAAGTCCTTCCACCAGGACTGCTCTCTGACTACCCACATGCGACGTCACACCGCCCCTCGAGCCTACTCCTGCGACAAATGCAACAAAAACTACACCACAGCCGAGAATCTCAAACGCCACGTCGCTATCCACAGCGACGAGACTCCGTACAGATGTGAGCGATGTAATAAGGCGTTTAAGATCCCGAGATATTTGCAGCAACACAGGATGTCTGCCAGGTGTCGAGCCATGTCTGCTAGGTGTCCTACTTAG
- Protein Sequence
- MCAATICRVCLGSEMRVQAVRDSRLREIYEKLTGSELETEDGRPSAVCGPCGGQLRRCRRLADAARAADCLLRDLLLTHTKVTSEAIGTLNIRIPHLTKSTLKSISFDGNSIDGSTYTGDGGVALKQETKEDTDTLKMENSFLTDDTDIQSDIKTETDIDNNFRMCHKTSKTKKECLTHLRIHSSTCKSEIIQITNKQTRCQVCHKDFSEPKALKLHMSVHTGAKPFVCDACNQAFRLKQSLQNHITVQHTKEKKFACDTCSKSFFHKKGLIAHKKSPACRFPAYKPYACAKCKSAFSDADSLRQHRRTHVGERRYGCSRCDKAFTIKRYLTKHILQVHSPDKPHPCFRCSKTFKQTSTLKTHMRVHTREKLFACKFCAESFLHNSSLKRHLLRHSMNAECSDEWVYCCDRCSKKFRSQAGLKAHLRSHTGEKPFCCDTCGKQFSQKGNLQLHMKIHFGEKCFACERCGKTFLLKCQLKIHYQVHSEEKPYACARCEMTFTFKSALKEHTRRLHSEVKAFACHRCGKSFHQDCSLTTHMRRHTAPRAYSCDKCNKNYTTAENLKRHVAIHSDETPYRCERCNKAFKIPRYLQQHRMSARCRAMSARCPT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -