Basic Information

Insect: Lampropteryx suffumata
Gene Symbol: -
Assembly: GCA_948098915.1
Location: OX402570.1:11139739-11141861[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.5 1.3e+02 4.3 0.1 13 23 139 149 137 149 0.91

2 14 2.2e-05 0.0019 19.5 0.9 1 23 155 177 155 177 0.96

3 14 1.1e-05 0.00096 20.4 1.2 1 23 182 205 182 205 0.94

4 14 8.5e-05 0.0073 17.6 1.4 1 23 211 233 211 233 0.97

5 14 5.9e-07 5.1e-05 24.4 0.5 1 23 239 261 239 261 0.97

6 14 1.6e-07 1.4e-05 26.1 2.2 1 23 267 289 267 289 0.98

7 14 6.2e-06 0.00053 21.2 0.7 1 23 294 316 294 316 0.97

8 14 2.2e-05 0.0019 19.5 2.3 2 23 331 352 330 352 0.96

9 14 1.3e-07 1.1e-05 26.5 2.4 1 23 358 380 358 380 0.98

10 14 6.4e-07 5.5e-05 24.3 0.3 1 23 386 408 386 408 0.98

11 14 5e-06 0.00043 21.5 0.5 1 23 414 436 414 436 0.98

12 14 7.2e-06 0.00062 21.0 1.0 1 23 442 464 442 464 0.98

13 14 2.4e-06 0.00021 22.5 2.9 1 23 470 492 470 492 0.99

14 14 1.8e-06 0.00015 22.9 0.5 1 20 498 517 498 518 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.5	1.3e+02	4.3	0.1	13	23	139	149	137	149	0.91
2	14	2.2e-05	0.0019	19.5	0.9	1	23	155	177	155	177	0.96
3	14	1.1e-05	0.00096	20.4	1.2	1	23	182	205	182	205	0.94
4	14	8.5e-05	0.0073	17.6	1.4	1	23	211	233	211	233	0.97
5	14	5.9e-07	5.1e-05	24.4	0.5	1	23	239	261	239	261	0.97
6	14	1.6e-07	1.4e-05	26.1	2.2	1	23	267	289	267	289	0.98
7	14	6.2e-06	0.00053	21.2	0.7	1	23	294	316	294	316	0.97
8	14	2.2e-05	0.0019	19.5	2.3	2	23	331	352	330	352	0.96
9	14	1.3e-07	1.1e-05	26.5	2.4	1	23	358	380	358	380	0.98
10	14	6.4e-07	5.5e-05	24.3	0.3	1	23	386	408	386	408	0.98
11	14	5e-06	0.00043	21.5	0.5	1	23	414	436	414	436	0.98
12	14	7.2e-06	0.00062	21.0	1.0	1	23	442	464	442	464	0.98
13	14	2.4e-06	0.00021	22.5	2.9	1	23	470	492	470	492	0.99
14	14	1.8e-06	0.00015	22.9	0.5	1	20	498	517	498	518	0.96

Sequence Information

Coding Sequence: ATGAGAGGTGCTCCGCTCATTTCCCTGGTTGTTCGCCCCATTACATTCTACAACTGTCCATACGATAAAGATGCTGAAGTACAGTACAGTCTAACTGGAGGTGTTAAACATGAGCATGAAGAAGCAGATAACTATCAAATCGAGTTTGATGATGATTGTTTTTGTGAAGATGTCAAGTTAGATATGGCTGAAGATTTTGGTGCAATAGTAAACAAAGCATCAGTGACAAAAGAAATCAAAGAGGAATTCACTGAAATAGAAGATGAAATCAACCATGTCTATGTACAATCAAGCAGTGTTAAAGAAGAACTTGAAATAAGTTCCAGCATTGCAAAAGTTAAAAAGCAATCTAATCTACCCCGAAGGATGAGGGTAAAGAAAAGATTTAATAAAATAATTCAGAATGGAGAAGAAAAGAGTGATGTCAAAAAACACATGAGAATTCACACTGGTCAAAAACCATTTGCTTGTCTTATGTGCGACAAGAAGTTCTATGAAAACTATCAATTACAAAATCATATGAATGGCCACCGAGGAGAAAAGTTTATTTGTGAAATATGCAATAAGACGTTTTCTGAAAATGTTCAGCTGAAACGGCACTTTAGTAGAATGCATGCTGGTCTAAAGCCGTTTGCTTGTGAGTTTTGCGACAAGAAGTTTTATGAGAATAATAGATTGCAACGTCACATCAAAGTTCACACTGGGGAAAAGCCATTTGCGTGTGATGAATGTAAAAAGGCTTTCTCTGACAAACGCACATTGATAATACACATGAGGAATCACACCGGAATAAAGCCATATGCCTGCAAAGTCTGTAATAAAAAGTTTACCACCAATAACACATTAAAGAACCACATGAGAATTCATGACAAAAACATATTCGCATGCGATAGATGTGACAGAACATTTACTGTGTTAGATTACTTGAAGAGTCATATGAAAGTTCACGGTACGGGGGGTAGAGCTAGACCTAACACCATCTACGCGTGCGCGTGTGACCGTTGCGGCAAAACTTTTTTTGATAAAGGTGTTCTAAAGAAACATATGAAAATTCACACGGGAGAAAAGCCATTTGTGTGTGATGTTTGCGACAAGACGTTTGCAGAAAAATGCAACTTAAAAAGGCATATTAGAACCCATACAGAAGAGAGACCATACCCTTGCGATATGTGCGATAAATCATTCGCTGAAAGTGGAAACTTAAAGACCCATAAGAGAGTTCACACTGGGGAAAAGCCATATTCGTGTGACGCGTGTGGTAAAGGTTTCGCTCAATCTAACTCGTTGAAGAAGCACCTTACAACTCATACAGGGGAACGGCAGTTTTCATGTGTCATCTGCTATAAAACCTTTACTGCAAAGAATAGCTTAAAAATCCACATGAGGATACACAGTGGCGAAAAGCCATATACATGTAATGTATGCAGTAAATCGTTTTATGAAAGCAGCTCCTTGAGTAGACATAAGAGAACTCACACAGGAGAAAACCCATATACATGCACAGAATGCAATAAGTCATTTAGTAGAAAAGCTTATTTACAACAACATGTGGCGTTTTGTAAACGTCAGTAG
Protein Sequence: MRGAPLISLVVRPITFYNCPYDKDAEVQYSLTGGVKHEHEEADNYQIEFDDDCFCEDVKLDMAEDFGAIVNKASVTKEIKEEFTEIEDEINHVYVQSSSVKEELEISSSIAKVKKQSNLPRRMRVKKRFNKIIQNGEEKSDVKKHMRIHTGQKPFACLMCDKKFYENYQLQNHMNGHRGEKFICEICNKTFSENVQLKRHFSRMHAGLKPFACEFCDKKFYENNRLQRHIKVHTGEKPFACDECKKAFSDKRTLIIHMRNHTGIKPYACKVCNKKFTTNNTLKNHMRIHDKNIFACDRCDRTFTVLDYLKSHMKVHGTGGRARPNTIYACACDRCGKTFFDKGVLKKHMKIHTGEKPFVCDVCDKTFAEKCNLKRHIRTHTEERPYPCDMCDKSFAESGNLKTHKRVHTGEKPYSCDACGKGFAQSNSLKKHLTTHTGERQFSCVICYKTFTAKNSLKIHMRIHSGEKPYTCNVCSKSFYESSSLSRHKRTHTGENPYTCTECNKSFSRKAYLQQHVAFCKRQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -