Lsuf027069.1
Basic Information
- Insect
- Lampropteryx suffumata
- Gene Symbol
- -
- Assembly
- GCA_948098915.1
- Location
- OX402569.1:6206978-6217126[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 0.0025 1.7 9.6 0.0 12 28 24 40 18 47 0.86 2 6 0.25 1.7e+02 3.2 0.0 14 28 190 204 180 209 0.80 3 6 0.12 82 4.2 0.5 13 32 238 257 233 265 0.77 4 6 0.018 12 6.9 0.1 19 41 272 291 270 294 0.92 5 6 0.073 49 5.0 5.3 14 41 295 319 287 321 0.79 6 6 0.039 26 5.8 0.3 18 40 327 346 325 349 0.84
Sequence Information
- Coding Sequence
- ATGTCGGACATGGTAGAAGAAATCGTTTACATGATCGCTCCGGAGGAGATCAAGTCGGAGCTGGAGTCTGATGATGAGAAGGATGTGACTTGCCGTCTCTGCAATAAAGTATTTGCCAACTGGGTAGCGTTGCAGAATCATGCCCGGGTCGCACATATGGAAGCATATGAAACAGGCGATCCTAGCACATGGACTGAAGACGAGGTCTCTCTTATAAATAAACCAATAAAACGAAGACCCGACAAAGTGAAAACCAAAACCCAAGAGATCTTGTCCTTAATACAGCCTACTGACATCGCCGGTCTCGCTTCAGAGAACGTCAGTTATATCATCATCAAGAACGATGACTTACAGAAAGAAAAAGAGAGAAGTAGAAAGAGACCGAAGAAGGAGAAAGATGAAATGAAAGTCAAGAAGTCTGAGCCTGTTAAGGAACCTGAAGCTATAACGGGTCCGTTCGAATGCCTCGAGGCGTCGTCTTTCGGCTCGGACGGCACGTGCCATCAGATGTTCTTCTCATGTTGTGAGTACTCTGAGCACTTACTAACGGAACACACGAGGCCGAGGCGACGAGCCGCTCGATGCCAGGTGTGCGAGCGTCCACTATCACAGTTGCACCAAACGGGACCTAAGGACTTCACATGCGAGATTTGTAGCGAGGGATTCGATACAGTTAACGAGCTGGTGGAACACAAGAACGTTTTTCATTCCCGGAAAAAACGCTACGAATGCTCTGTATGCCAAAAGAGATTCTCCGCACAAGGTGGGGTTGTTCAGCATATGCGGATGCATACGGGTGACCGCCCCTACAGCTGTACCTTCTGCCCGAAGACCTTCACGCAGAAGTCTGGCCTGGAACAGCACATCCGCACTCACACCAAAGTCAAACCGTTCCGCTGCGTTATATGTTCCAAGACCTTTATACAAACCACACATCTGAAACAACATATGCGTACGCATACCAATGTTGTACCGTTCCAATGTGTGATATGCGAGAAGCGCTTTAAGCAATCCAGTCATCTAAACTACCACTTAAAAAACCACCCTGCGGACATGACCGACGAGCAGAAAGAGAAATACCGAGAGATAGTCAACAAGATACGCAGAGACGAGATATGTTCCGCGGACGAGGAGACAGCGCAAGCCGAGCGCAGCATCCAGGGAGACGAGAGAGAGAATGACAACTATGAGGTGTTTGGGTATGAGGACTCTCGGAGAGTCATCACTTGTACGGTCGCACAGTATTAG
- Protein Sequence
- MSDMVEEIVYMIAPEEIKSELESDDEKDVTCRLCNKVFANWVALQNHARVAHMEAYETGDPSTWTEDEVSLINKPIKRRPDKVKTKTQEILSLIQPTDIAGLASENVSYIIIKNDDLQKEKERSRKRPKKEKDEMKVKKSEPVKEPEAITGPFECLEASSFGSDGTCHQMFFSCCEYSEHLLTEHTRPRRRAARCQVCERPLSQLHQTGPKDFTCEICSEGFDTVNELVEHKNVFHSRKKRYECSVCQKRFSAQGGVVQHMRMHTGDRPYSCTFCPKTFTQKSGLEQHIRTHTKVKPFRCVICSKTFIQTTHLKQHMRTHTNVVPFQCVICEKRFKQSSHLNYHLKNHPADMTDEQKEKYREIVNKIRRDEICSADEETAQAERSIQGDERENDNYEVFGYEDSRRVITCTVAQY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00856953;
- 90% Identity
- iTF_00856953;
- 80% Identity
- iTF_00856953;