Lsuf010835.1
Basic Information
- Insect
- Lampropteryx suffumata
- Gene Symbol
- -
- Assembly
- GCA_948098915.1
- Location
- OX402555.1:19210963-19213485[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.6e-12 1.3e-09 38.5 0.0 1 37 16 53 16 60 0.90
Sequence Information
- Coding Sequence
- ATGGTGCGAAATTACGTCAAAAAGAAAGAATCTAGCCCTAAATACACTGAAGAAAAATTACAAAGAGCTCTTGAGGAAATAAGAGCTGGTTCACTTACCACACACAAGGCGTCCGTTCTTTACGGAATTCCATTTGCTACTTTGTATTGTCGAAGCAAAGGAACTCGAGGTGCTATAAAGAAAGGTAAAGGACGTAGAATTGGACTTCCCGAGAACGTTGAAAACATTTTGGCAACTTCTGTGAAAACACTGGCTAAATGGGGCTTTGGTCTAAGTCGAAAGGAAATTTTAGAGCTATTATTATTATTACAAAAACTGTTTATTCTGCTCATTATAAGGGTTAAAGGAGGCGTACCTGGGAAAGACTGGTTCCTTAATTTCAAAAAACGACATCATTTATCAATTCGCAAACCGGAACCATTGGAGTATGCGAGAAAGAAGGCTGCTACAGATCCATTCATCATCTATGGATACTTTGATCTCCTAAAAAAAGTTTTGACGGATTTAAACTTGGAAAACAGGCCGAAACAGATCTGGAATTTGGATGAGAGTAGTCTCAGTATAGATCCGTCGAAAACAAAAATCGTCGGAGAAAAGGGTGAAAGCTCATCCAGAGTCACCAGCACATCCGGAAGAGAAAACACAACTTTTGTACTGGCTGTTAATGCTGCCGGTGGTCGAGCGCCACCCTTGATTATATTTAAAGCAAAAAATATCTGGGACCAGTGGAAAGCCCAGCCAGACAAGGAATATCCCGGTACGGCTTACGCTGCCTCTTCAAATGGTTGGATGGAGAAAGAGATATTTGAAAACTATTTTGAAAAAGTCCTCATACCAGCTCTGGGTGACGAACGGCCAGTCCTGGTCATATATGACGGCCACTCTACGCATGTATCTCTCAACCTAATACAAACTGCATTGGCCAATGACATAACCATTATTAAATTGCCAGCCCACACAAGTGATAGATTACAGCCATTAGACGTTTCCGTGTTCAAATCTTTTAAACAGAAATGGGACCAAACTGTTGCCACTTGGCAGAGACATAATATCGGTCTAAAACTACCCAAAGCACTGTTTTCACAATTTTTGGGTGAAACTTGGATGGAAGTAAGTGAAGATGTTATCATGAGTGGATTTAGAAAATCGGGGATATTTCCGTTCAATTCTGACGTCATCCCAAGAGAAAGTTTCTCTACGGAGGCTTTAGAGCGGTGGGAGAAGCACCTTGTGTGTCATGTGAACGATAGTGAGGTGGGTCCTTATCCTGATCGTTCAAATAACTCATCACCATCGATAATAAATCCACCAGCTTTCGGGGAGGAGCCCATTCCAACAACTTCTCAATTGTCAATTGTCAACGAAGCAGGTTCACAGAATTCCGTTACGTCAACTCCTCTATCAAATGAGATACAAGACTCTAATACTGCCCCAACTATGTCATTAGAACAAATGATTATTTCCACTATACAGCAAAAAGATCGGGCTGTAAATAAACAAAAGAAACGTAAGGTAGCCTCAGGTGCGGAAGTTGTTACGTCGACTGAAATGCTTGAGATTTTAAGGGAAAAAGAAAATCTATTTAAGAGAAAAAAAACTAAAATACACAAGAATATGAAAGGGAATAAGGGACGAAAGGAAAAAAGAATGAAAAGAAAAGATTCCGAAGATGACAGTACTGATGTAGGTTCTGAAAATGAAATACACTATGCTAATTCCGATGAAAGTGAATGGGTGGAAGATGAAGTTGGAGATCTTATAGAGCCAGAAGATGAAGCTGGACATCATATAGAGCCAGAAGATGAAGCTGGAGATCTTATAGAGCCAGAAGATGAAGCTGGAGATCTTATAGAGCCAGATAACAAAATAATAATGACGGAAATGAATAAGGAAAATACGATAGAGGAGGCTGAACTACAAATTAACAAATGGGTGATTGTTAAATACGCTCTAGTAAAAAAATATAAATATTACATAGGCATTGTGCAAAACAAGATAGATAGTCGTTGGGAGGTCAAATTTGTACGACGCAAGGGAGCAACATTTGTATGGCCAACAATAGAGGATGTTGATACAATCACCGCTGATTCTATCGTTAAGATATTGCCAAATCCTACAATAACCAAGCGTAATATAATATACTTCGATTACAAGTTCAGAAATATGATTATTTCGTAA
- Protein Sequence
- MVRNYVKKKESSPKYTEEKLQRALEEIRAGSLTTHKASVLYGIPFATLYCRSKGTRGAIKKGKGRRIGLPENVENILATSVKTLAKWGFGLSRKEILELLLLLQKLFILLIIRVKGGVPGKDWFLNFKKRHHLSIRKPEPLEYARKKAATDPFIIYGYFDLLKKVLTDLNLENRPKQIWNLDESSLSIDPSKTKIVGEKGESSSRVTSTSGRENTTFVLAVNAAGGRAPPLIIFKAKNIWDQWKAQPDKEYPGTAYAASSNGWMEKEIFENYFEKVLIPALGDERPVLVIYDGHSTHVSLNLIQTALANDITIIKLPAHTSDRLQPLDVSVFKSFKQKWDQTVATWQRHNIGLKLPKALFSQFLGETWMEVSEDVIMSGFRKSGIFPFNSDVIPRESFSTEALERWEKHLVCHVNDSEVGPYPDRSNNSSPSIINPPAFGEEPIPTTSQLSIVNEAGSQNSVTSTPLSNEIQDSNTAPTMSLEQMIISTIQQKDRAVNKQKKRKVASGAEVVTSTEMLEILREKENLFKRKKTKIHKNMKGNKGRKEKRMKRKDSEDDSTDVGSENEIHYANSDESEWVEDEVGDLIEPEDEAGHHIEPEDEAGDLIEPEDEAGDLIEPDNKIIMTEMNKENTIEEAELQINKWVIVKYALVKKYKYYIGIVQNKIDSRWEVKFVRRKGATFVWPTIEDVDTITADSIVKILPNPTITKRNIIYFDYKFRNMIIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00700947; iTF_00700948; iTF_00700949; iTF_00705924; iTF_00705921; iTF_00705922; iTF_00705923; iTF_01161251; iTF_01161255; iTF_00702825; iTF_00705931; iTF_00856531; iTF_00856532; iTF_00856533; iTF_00700950; iTF_00856535; iTF_00705947;
- 90% Identity
- iTF_00705924;
- 80% Identity
- -