Basic Information

Gene Symbol
Kdm5
Assembly
GCA_948098915.1
Location
OX402570.1:12429625-12476258[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.9e-24 9.9e-21 74.9 0.0 2 89 101 184 100 184 0.93
2 3 6.4 2.2e+04 -3.2 0.0 21 41 996 1015 983 1017 0.66
3 3 4.6 1.6e+04 -2.7 0.0 45 69 1310 1334 1298 1347 0.62

Sequence Information

Coding Sequence
ATGGGAAAATGTGATGAAACTAATGTGGAAGTTAATATGGGGGACTCCGCGTCCCCCATGAAGCCGGACAACTTCACATTTACGCCGCCCCCAGAGGCCCCGGTCTTCGAGCCTACGGCAGAAGAGTTCCTGGACCCCTTGGCGTACATCAGCAAGATACGTCCCATCGCCGAGAAGTCAGGGATCTGCAAAATAAAGCCCCCGGCGCATTGGCAGCCACCCTTCGGTGTGGACGTAGACCGTCTGCGGTTCACGCCCAGGATCCAGCGTCTTAATGAGTTGGAGGCCATAACCCGAGTGAAGCTGAACTTCCTCGACCAGATCATCAAGTTCTGGGAGCTGCAGGGTTCCATGCTGAAAATCCCGACGGTGGAGCGGAAGCCGCTTGACCTGTACGCACTGCATAAAGTGGTCAAGGAAGCAGGTGGCTTCGAAGTGTGTTCAGCGGAGCGCAAATGGTCCAAGATAGCGCGTCGCATGGGCCATCCCCAGGGGAAGGGCATCGGCTCCATAATGAAGAATCATTACGAGAGGATCCTATATCCCTACGACGTGTTTAAGAGCAACGGAGCTGTTGGGGATAACAAGGAGACTAAGATAGAGGTGAAACGTGAGCAGACCCCGGACGCTTCTCCCGCGGGTCCACGTTCCCGTTCGTCTTCGAAGTGTGCGCAGGCGACCCCCCCTCCCGCGTCCCCCGCCCCCGCCCCCTCGCCCGCCCGCCGCTACAAGTCGGAGCCGGAGCCGGCGGCCGAGGGCAGCCATACAGAAGGCGCACTACCCCCCAACAATGACAAGGGGATGAAGACCCCGGTTAAGGAGGAGAGTCCGGAGACTAATAGACGCAGTCCTCGCGAGAACAAATGGATGTCAGGGACGGGCAGCTGCGGATCTCGCGGGCGAGTGACCCGCTCCACGCGACTCCGTGAACATCGCATGTCTAACATGACGGTCTCCGTGACGCCGGCCCCGCCCGCCCCGCCCGCCCCGCCCGCGCCAACGCCCAGAGACCTCGACGTGCTTCCTGGAGCCGTCGTCAGTACCAACGATCCCTTGGCGAAGTACATGTGTCATGTCTGCGGGCGCGGTGACGTGGAGGAACAGATGCTGCTGTGTGACGGCTGTGACGACTCGTACCACACCTTCTGTCTGCTGCCGCCACTAGCGGACGTGCCCAAAGGGGACTGGCGGTGCCCCGTATGCCTGGCAGAAGCTGTATCAAAGCCGACAGAGGCGTTCGGCTTCGAGCAAGCCACAAGAGAGTACACTCTTCAACAGTTCGGAGAGATGGCTGATCAATTCAAATCAGACTACTTCAACATGCCAGTACATATGGTACCAACATCAACAGTGGAAAAGGAGTTCTGGCGTATAGTGTCTTCCATCGATGAGGATGTCACGGTGGAATATGGCGCTGATCTCCATTCCATGGACCATGGATCAGGTTTCCCAACAAAGTCCAGCGCTAACCTGTACCCCGGAGAGCAGCAGTACGCAGACTCCAGCTGGAATCTCAACAACCTGCCGGTTCTGGAAGGTTCTGTGCTGGGGCACATCAATGCTGACATATCCGGCATGAAGATACCGTGGCTGTATGTGGGTATGTGCTTTGCCACATTCTGCTGGCACAACGAAGATCACTGGAGCTACTCCATTAACTATCTACATTGGGGGGAACCAAAGACTTGGTACGGAGTCCCGAGCTCCAAGGCCGAGCAGTTCGAGGCGGCTATGAAGGCCGAAGCCCCGGAACTGTTCCAGCTGCAGCCAGACCTGCTTCACCAGCTCGTCACCATCATGAACCCCAATGTTCTCATGAAAGCTGGCGTTCCAGTATACAGAATGGATCAACACGCGGGCGAGTTCGTGATCACGTTCCCTCGGGCCTACCACGCCGGCTTCAACCAGGGATACAACTTCGCCGAGGCGGTCAACTTCACACCTGCTGACTGGTTGAAGATGGGCCGAGAATGCGTCCTCCACTACTCGACTCTCCGGCGCTACTGCGTGTTCTCCCACGACGAGCTGGTGTGCAAGATGGCGCTGGAGGCCGACTCGCTCAGTCTGACCGTCGCCCTCGCCGCCTACCGCGACATGCGGACCATGCTGCACACCGAACGGAAGCTGAGGAAGAGCATCCTGCACTGGGGCGTGACGGAGGCGGAGAGGGAAGCCTTCGAGCTGCTGCCGGACGACTCGCGGCAGTGCGCCTCGTGCAAGACGACGTGCTTCCTGTCGTGCGTCACGTGCGTGTGCACGCCGCACGTCGCCTGCCTGCGCCACGCCGCCGCACTCTGCGCCTGCGCGCCGCATCTGCATCGTCTAAGGTACCGCTACACTCTCGACGAGCTCCCAGCGATGCTGGAGAAGCTGAAGAAGAAGTCGGAACAGTTCCGCGAGTGGGCGGAGGCTGTGCAGAATGCGTTAGATCCTGACACACCCAAGACCTGTGATCTGGACGGCCTCAGAGCACATTTGCATCGAGCTACAGAACTTAAGATGCAGAAAACTGAGCTGGTGCGTGCTTTAGAGACGGCGATCGAGGACGCTGAGAAATGCGCGTCCGTCATCCAACAACTCGATCTAAACAAAATGAGGACCCGAACCCGCCACCACGACCCCAAGTACCGGCTCTCCATCCACGAGCTCACGCTCTTCGCTGCTGAGATCGACAGCTTGGCTTGCGTCCTACCTGAAGGATCGGCTGTCAAAGAGGTGTTGCGTCAGACTTCAGAGTTCGAGACCAGATCCACGGAACTGCTCAACAAAGACTTGGAGAAGATGGAGGCGTCTTATGTCAGGGAATTGGAGGAGACGGTGGAACTAGGTGGGCGACTATGCATAGTTTTGCCTCAGCTTGAAGCGGTGACGGTCAGACTGGCGCAGGCGCGGTGGCTAGAAGATTCCCAGCATCACCGAGATAACTGCAACTCGCTGACTCCGGCGATGCTGAAGCAGCTGCTAGCTAAAGCGGAGGAGCTGCTGCCTCATATTGCCATCGAGAAGGAGAGAGCTTCACTGTACAGACTACAAGCGGAAGTAGAAGAATGGGAGACGCGAGCTCAGGCAGTGCTCATAGACGCCAGCAAATCGACGCATGATGAAGAGAATCCGCAGTACAGCACTATCACAGACCTGACACAGCTGTTAGCTGAAGGATCTGACATCGAGGCATCTTTACCTTCCTACCATACTCTGCAGACAGCCATCACTCACGCCAAGGATTGGTTGAATAAGGTGGAGGAGATGCAGTCCAAAGATCTATACCCGTACATGCACAGTGTGGAAGCATTAGTAAAGAAGAGCCAGCAGCTTCCGCTAGCGTTGTACGAGAAGGACCAGCTAGCGGCCGCACTGCACTCTGCCAAGGAGTGGAAACGGGGAGCCGCTGAAATGTTCCTGAAGAAAAACTGGCCTCACACGTTACTGGAGGCGCTGTCACCCCGCGTGGGGGGTGCTGGGGGTGCGGGCGGGGGGGTGGGGGGTGGCAGGCGACGCACGCAGCCCGCGTTAGAATCCGCCCTGTTCCTGGACAAGTTCAACGAGGACTCCACCCCCACGGAGATAGTGGCGGCCTTCAAACAAGCTGAGGCCAAGGAACTGCAAGCTATTAAGGAACTTAGGAGCCGCAACATGCGCAAGGACGTGCGAGCGCCGCCTGCTACGACGGTCACCTTCTGCATCTGTCAGAAACGGCAATATGGCGTCATGACGCAGTGCGAGCTGTGCAAGGACTGGTTCCATGCATCGTGCATCGCGAACGCTCGCGACGACCGCGAGGAGTCCCCGGACCGCGAGGGCTTCCCGGGCACCGACTCCAAGTTCCTGTGTCCGGACTGTGTCCGCACCAAGCGTCCGAGACTCGACAGGATCCTGGCCTTACTCGTATGGCTACAAAAGCTCCCGGTTCGGTTAGCCGAGGGCGAGGCCCTGCAGTGCGTCACAGAACGTGCCATGGCGTGGCAGGACCAGGCCCGCGCGATGCTCTCCCAGCCGCATCACTTGCCCACGCATCAGGTAAAGAAGACTGTAAGTGCCCAATGCTGGGACCGAGGCCAACAGGCGAACAGAGAAAAAGCTGATAAATTGAACGCAGAGTTGAAGAAAGCGACCGGACGAGGTCACGACAGCATGTCACAAAACCCAAGATCGTCAGCGTCAGTGGAGCACGCCTACAGCGCCACTCCGAGATCGCCGGGGACCCGGCTGCCACCTGCGGCTCTTCAGAAGCTGGAGGATCTGATGCTGGAAGGAGATCTACTTGAGGTGGTGTTAGAGGAGCAACAGCAGGTGTGGGAGGCCGTGAGCGGAGCCCGCGACGCGGCGGGACGGCGGGGCGCGCGCGTGTTGGACGCCGGGAGACGCAAGCGGCGGCGCGCGCCCCTCTCGCATCCCGCCAAGCGGACTCGCCATCTGCGGCAGCACAACCACGCGCAAGTTGGACCGTCTACATCTGCGGCGTCGTCAACGAAACCTTCGTCATCCAAACGCGGAGGGTCTACTACTAACTATCTCAATAGGAAACAGGGTCTGTCTTCAGCGTCAGGGCTGATGATGCGGAAGCATTACATGGCGCGCCAGGAACGGAGGAAGAGAGGAGCTTCCACTAGGCTCAGGGGTTCGAGTCGCGGCGGCGCCAACCCGGCGGCCCGACGTCCTCGCAGCCAGGACTCCAGCTCCTCTATGTCCTCGGCGGAAGACGAAGACGACTGCGCGGCCGTCAACTGTCTGCGACCCACTGGCAAAGAAGTAGACTGGGTGCAATGCGACGGAGGCTGCGACGAGTGGTTCCACATGCATTGCGTCGGCATCGTCAAGGGCACGCTCGGAGAGAACGACGACTACGTGTGCGGCTCCTGCGCTAAGGACAACAAGCAGTGA
Protein Sequence
MGKCDETNVEVNMGDSASPMKPDNFTFTPPPEAPVFEPTAEEFLDPLAYISKIRPIAEKSGICKIKPPAHWQPPFGVDVDRLRFTPRIQRLNELEAITRVKLNFLDQIIKFWELQGSMLKIPTVERKPLDLYALHKVVKEAGGFEVCSAERKWSKIARRMGHPQGKGIGSIMKNHYERILYPYDVFKSNGAVGDNKETKIEVKREQTPDASPAGPRSRSSSKCAQATPPPASPAPAPSPARRYKSEPEPAAEGSHTEGALPPNNDKGMKTPVKEESPETNRRSPRENKWMSGTGSCGSRGRVTRSTRLREHRMSNMTVSVTPAPPAPPAPPAPTPRDLDVLPGAVVSTNDPLAKYMCHVCGRGDVEEQMLLCDGCDDSYHTFCLLPPLADVPKGDWRCPVCLAEAVSKPTEAFGFEQATREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEKEFWRIVSSIDEDVTVEYGADLHSMDHGSGFPTKSSANLYPGEQQYADSSWNLNNLPVLEGSVLGHINADISGMKIPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPSSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNVLMKAGVPVYRMDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKMGRECVLHYSTLRRYCVFSHDELVCKMALEADSLSLTVALAAYRDMRTMLHTERKLRKSILHWGVTEAEREAFELLPDDSRQCASCKTTCFLSCVTCVCTPHVACLRHAAALCACAPHLHRLRYRYTLDELPAMLEKLKKKSEQFREWAEAVQNALDPDTPKTCDLDGLRAHLHRATELKMQKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLSIHELTLFAAEIDSLACVLPEGSAVKEVLRQTSEFETRSTELLNKDLEKMEASYVRELEETVELGGRLCIVLPQLEAVTVRLAQARWLEDSQHHRDNCNSLTPAMLKQLLAKAEELLPHIAIEKERASLYRLQAEVEEWETRAQAVLIDASKSTHDEENPQYSTITDLTQLLAEGSDIEASLPSYHTLQTAITHAKDWLNKVEEMQSKDLYPYMHSVEALVKKSQQLPLALYEKDQLAAALHSAKEWKRGAAEMFLKKNWPHTLLEALSPRVGGAGGAGGGVGGGRRRTQPALESALFLDKFNEDSTPTEIVAAFKQAEAKELQAIKELRSRNMRKDVRAPPATTVTFCICQKRQYGVMTQCELCKDWFHASCIANARDDREESPDREGFPGTDSKFLCPDCVRTKRPRLDRILALLVWLQKLPVRLAEGEALQCVTERAMAWQDQARAMLSQPHHLPTHQVKKTVSAQCWDRGQQANREKADKLNAELKKATGRGHDSMSQNPRSSASVEHAYSATPRSPGTRLPPAALQKLEDLMLEGDLLEVVLEEQQQVWEAVSGARDAAGRRGARVLDAGRRKRRRAPLSHPAKRTRHLRQHNHAQVGPSTSAASSTKPSSSKRGGSTTNYLNRKQGLSSASGLMMRKHYMARQERRKRGASTRLRGSSRGGANPAARRPRSQDSSSSMSSAEDEDDCAAVNCLRPTGKEVDWVQCDGGCDEWFHMHCVGIVKGTLGENDDYVCGSCAKDNKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00632545;
90% Identity
-
80% Identity
-