Lcur007222.1
Basic Information
- Insect
- Lamproptera curius
- Gene Symbol
- ZNF526
- Assembly
- GCA_029286875.1
- Location
- JAGSMT010000019.1:3486276-3512599[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.032 5.1 9.0 3.8 2 23 646 667 645 667 0.95 2 15 3.6 5.6e+02 2.5 3.7 1 23 679 703 679 704 0.89 3 15 0.00015 0.023 16.3 1.5 2 23 710 733 709 733 0.96 4 15 0.063 10 8.1 0.2 1 23 739 761 739 761 0.93 5 15 0.002 0.31 12.8 3.3 1 23 929 951 929 951 0.98 6 15 0.21 33 6.4 0.0 2 20 962 980 961 982 0.88 7 15 0.084 13 7.7 0.7 1 23 1054 1076 1054 1076 0.97 8 15 1.9 2.9e+02 3.4 7.2 1 23 1083 1105 1083 1105 0.95 9 15 0.0013 0.2 13.4 1.8 1 23 1162 1185 1162 1185 0.95 10 15 0.00034 0.054 15.2 0.5 1 23 1192 1215 1192 1215 0.98 11 15 0.044 6.9 8.6 0.1 2 23 1237 1259 1236 1259 0.95 12 15 0.00066 0.1 14.3 2.5 2 23 1286 1308 1285 1308 0.94 13 15 0.0017 0.27 13.0 0.2 1 23 1316 1338 1316 1338 0.96 14 15 0.00013 0.021 16.5 0.1 1 23 1344 1366 1344 1366 0.97 15 15 4.8e-05 0.0076 17.9 0.5 2 23 1373 1395 1372 1395 0.95
Sequence Information
- Coding Sequence
- ATGGAGCAAGAGCTACCTCCATTAATTCTTTGTATGGAGAATATGAATGGGGAAGAGGTAACATTAAGTATTGAACCAAATGATGATTTTCAAACATTCCTGGACAAAGCCAAGGGCATATTGGGGTTcgattttgatattaattcaattactGGCGACCGCGCCGTGTCGCTAAACGAGAATATCTaccattatcttttaaattcgGATCTTCATTTTCGGGATGATCCCCAGCTGGGCGTTAACAGTAACGATTGTACTTCAGAGGAAGCTAACCCCAGCAATGATGGATTTATGTATATGCTCGATGATGGTACTCAAATAAGAGCCTCACAGATACAATTCGATAATGAAGACGCCCCTGTAGATTTAACGGCGGAACAAATACCATTCGTACGCTACGCAAACAACAGTGACGACGAAAACGAGAGATATGATAGGAACAatgaaaatacgaaaaaaatcaATATCGTTGAAAGCCCTGTTGCACGATGGACTAACTCCGATAGCCCTAAATGTAGCTTCGTAAATAGTTTACCATTTAAACTTGTCTGCTCGAACACGGCCAATTTTGAGGCACAGTTCACAAAATATTTGGAAACTAGCAGTACTAAAACATTTACCACGTTAAATCCAATCGATACTAGAAATAGATCCCCGAAAAGTATAGTCAAGGACAATTATCAAAACTACGATGGCTTCTACAAACAGCAGCGCAATAAAGATGACATTTCCAGTTTCACCCGCGAGGAAATCCTTAACATGTTTAAGGACTCCCCTGTTACATCTACGCCTTAcgaagaaaaacaaaactataacgAGAAAAGGCGTCATATTCGCAAAACCGATCCCACGCGTTTACATAAAAGCTGGAGTAACAAAACGCTGCCTTATTCCGACTTGAAAGAAGGGGACAACCATAAACAGAGCTGTTTCATCTGTGGTAAAGTTGATGATACCATAGATAAGTTATATTTGTTCGATAACGAGGACCAAAAACTGCATAGATGCTCATCACCGAGAAGTTATCCAACTCGACTGAAGATAATATGCGAACAATGCTTGACTGATAACTTTAGACTCAGCCCGATAAAAAACCCCACCCAGTCATTGGGCCCTGATGATTATTTGGTGATTAAGAATAACCAacagtttatatttaagaaagtgAACGATTTTAAAGTACAGGACGATATCGAGATTATTGACAATTTGGAAACACAGCACAGTTTGAAAGAGTCACAGGAATACGTGAAAGTTGAAATTGGTTCGGACGGCGAGATAGTTACTAAATGTATAGACAACGATACCAGGTCCTCAGATGATGTGATCATTGTTAAGGATGAGAAGAAAGAGAGCTCCAGTGATGTCGAAATTATAGAGCCCGATATAGATGATAATATAATAGACAACATAGATGAAGCAGATGAAGATGTTAAAGAATTTCTAGGGATATATCATAGTCAcaattGTTACGCCAACTTTAAATGGCTGAAAGGGCACCTTAAGGCCGCCCATTACAAGGCAAAAGTTGGAGATAGCGACGATGTCGGCGAAAAGCAAAAAGACGAGGTCGCCACATCCCCTGCCTCGTCCCCGGTGGCCAAAAGAACTAGGAGTGCAGTGAGAAAATCAGGCAGCGAAAACGACAAAGACAGAAGTCCAGATGTGCTGGAGAAAAACAAGATGAATGAGTCAACATTGACCGTCAAAACCGAAGTGAAACAAGAGTGTCTCGATAGTAGTGACGACGAGGCGATATGGATCGTGCAGACGGTCGGTGACGAAGCTAATGAACAATTGGAGAGCTTGCTCAAGGCAGCGaGGGCACAAGGTAGACCTAGACAGAAGCGTGAGTCCATCGATAATGATTTACTAGTTGAGAGACCTAGAAAGAAGAGGGGCAAGGGGCCAACCTCTGACCCCCAAATCGTAACCTGCCACAACTGCAACGAGTCGTTCACCTCCAAAGTACGCCTAAAGTTTCACATGCAGTTCCACGAGCCCACCGACCTGTTGACCACCGAAGGCGACTACACATGCCCCAAATGTCCTGAAGCGCACTTCCCCACCGAGAGCAAACTCTTCGACCACGTCCACTTCCAGCACCACAAGCAGAAGCGATGGCAGTGCCCAGTCCATGATTGTGGAAAGACCTTCTTTCTGAGGGCAACACTGACGAAGCACAGTCGCACGCACACAGACACGCGACGTTACGTGTGCGTCACGTGTGGGAAACGGTTCCTCGACAAGCAGACCCTCGACGAACACGGTGTTACCCATTTACAAgttatgtcggactcgcaccgactaaaaccaccacgttgttccttcctgacgcctttacgATGGGGTTACATGCAGCAGCGGACGCAGCCCCGTCTGTCGCCTATGGGCCCTCATCTACCtttgggcgcgtcggaactaacgcgccctacGGCGCCCTTGTACTTAGGTAACAGACAACCCCGAGTACtgtactcaggggccatggaagCCAGGAGTACTAAGCCCACTCAGGACAAGACCCCAGCCTCCAGCGGGGCCTCGATGTTTaactccgccgctagctccgtttcggccgcagaaggaatAAAaatcgacgactccatgccgaatgtcaTGACCTTTGGCCCCTTCATACCACATCAGCGGTACGATCCCGCCGAGTTGCGGAgaatagggagagcggcctatgTACATACCTTCTCTTTCCGCGTCTCCTCCTTGGCTACAGCGGACAGGGATGGAAGCACGTCTGCCGCTTTCGTCCTAATAAAGCCGTTCCAGTGCCACATCTGCCTGAAGCAGCTGACGCGTCGCTCCCGGTTGCGAATGCACCTCCGCGCGCACGAGGAGGAGCTGGCGCCCAGTCTCGTGCTGGTCTGCGCCGCGTGCGGACGCGCCTTCAGGGATTCGGACGATGCCCAGGAGCACGCCAGCAAATCGAAGGAGTGCATGGAACAATTCAGTCCGACGGTGAAAGAGGAGAACGAGACATCCGTTCAGCTCTCGCCGACGAGCGGTCTGGTGACTCATGCTACGGCCGTAGTTGCGCAATCGCCGCAAACCTCCTCCGCGCCCGGTGGCGAAGCCCTGCTGTCCGAGCTGACGGATGCAGCGCGTCTCATCATTCGAGTCGTTGAGATCGAGAAAGCGTTTCGTTGCGAGTACTGTGAAGAtGTTTTTTATCTGGAACACGCCCTGAACAGCCACCGCGCAATCCACAAAGGTGTGAAGAATCCTTTCACTTGTCACATTTGCAAAGTCAGCTTTGCCACATACTCCAGATGCACCACTCACAAGACGACCCACGGCTTCTACAAGCGTTCGCTGGCCGCGTGCCAGAAGCGCACTGGCGGCGTGGGCGGCGTGGGCGGCGTGGGCGGCGTGGGCGGCGTGGGCAGCGTGGGCGGCGCGGCCGAGGCGGGCCCCGCCGCCACCGGCATCCTCGGCTACGGCGGCTTCCCCGTCGTCAAACACTTCCTCTGCGAGGATTGCGGAAGATCGTACCTCCACTGGACGTACCTTCAAGTTCATCGCAGGATGAAACATGCCAACGAGAGTTTTCTGTACAAATGCAACCAATGCGGTCTTACGTTCCCCAACAGTTGGAGTGTGGCGTACCACAGGAAAAAGGTACATGGCAAGACCGGCACGGAAGATGGCGGCGGTACCACAAAAATCGCCAAAAACGATCACAAGATCCCGTGCCGCGACTGCAGCGAGGTGTTGCCGAACAAGAATGCGCTTTACGCCCATAGACAGAAGGAGCACAGTAATATGTCTCTTTCTATGAGCGATgatcaaaatgCAGGGGACGCGCCAGTCCGCGCGCCAGCCCCCAGGGCCACCTCCTGCTGCAAATGTGGTCACAACTTCAGCGAGCCCAGTGCTTTGCAACGCCATCTGAACGAGGTGCACGGGCACGAGCGCGCGAGCGGCCACGCGTGCGCGGTGTGCGGGCGCGCCTTCCGCTCGGCGTCCGTGCGCAACGAGCACCTCCGCGTGCACACGGGCGAGCGCCCCTTCGCCTGCGACGTCTGCGGCCTCGCCTTCCGACGGTCCACCGCCATGAGGAACCACCGCCTCATCCACTCCGGGGTGCGCGCGTGGCCTTGCCCGAGATGCCCCAAGCGGTTCCGCATTCGCTCCGACTTGCGCACGCATTTGCGGCTAAAACATCCCACTAGGCTTATTGTGCTCGAGATCGCAGGTTTGAATCCGTCGCACGATGAAGTGATGCAGCACATTCGAGACAACAATGTTACCGAAGGACGGATTTTAGAAATAACGAAAATGTCATTCGAGAAGGGTACCACCAGTTTAGTGCCGACCACCGCTCGGGCATTGTCCTTGCTAAGCGCAGTGCCTAGAACTAAGATAACTACCGAAACCCCACTTCAAATTAATACCGGTAAGTGA
- Protein Sequence
- MEQELPPLILCMENMNGEEVTLSIEPNDDFQTFLDKAKGILGFDFDINSITGDRAVSLNENIYHYLLNSDLHFRDDPQLGVNSNDCTSEEANPSNDGFMYMLDDGTQIRASQIQFDNEDAPVDLTAEQIPFVRYANNSDDENERYDRNNENTKKINIVESPVARWTNSDSPKCSFVNSLPFKLVCSNTANFEAQFTKYLETSSTKTFTTLNPIDTRNRSPKSIVKDNYQNYDGFYKQQRNKDDISSFTREEILNMFKDSPVTSTPYEEKQNYNEKRRHIRKTDPTRLHKSWSNKTLPYSDLKEGDNHKQSCFICGKVDDTIDKLYLFDNEDQKLHRCSSPRSYPTRLKIICEQCLTDNFRLSPIKNPTQSLGPDDYLVIKNNQQFIFKKVNDFKVQDDIEIIDNLETQHSLKESQEYVKVEIGSDGEIVTKCIDNDTRSSDDVIIVKDEKKESSSDVEIIEPDIDDNIIDNIDEADEDVKEFLGIYHSHNCYANFKWLKGHLKAAHYKAKVGDSDDVGEKQKDEVATSPASSPVAKRTRSAVRKSGSENDKDRSPDVLEKNKMNESTLTVKTEVKQECLDSSDDEAIWIVQTVGDEANEQLESLLKAARAQGRPRQKRESIDNDLLVERPRKKRGKGPTSDPQIVTCHNCNESFTSKVRLKFHMQFHEPTDLLTTEGDYTCPKCPEAHFPTESKLFDHVHFQHHKQKRWQCPVHDCGKTFFLRATLTKHSRTHTDTRRYVCVTCGKRFLDKQTLDEHGVTHLQVMSDSHRLKPPRCSFLTPLRWGYMQQRTQPRLSPMGPHLPLGASELTRPTAPLYLGNRQPRVLYSGAMEARSTKPTQDKTPASSGASMFNSAASSVSAAEGIKIDDSMPNVMTFGPFIPHQRYDPAELRRIGRAAYVHTFSFRVSSLATADRDGSTSAAFVLIKPFQCHICLKQLTRRSRLRMHLRAHEEELAPSLVLVCAACGRAFRDSDDAQEHASKSKECMEQFSPTVKEENETSVQLSPTSGLVTHATAVVAQSPQTSSAPGGEALLSELTDAARLIIRVVEIEKAFRCEYCEDVFYLEHALNSHRAIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLAACQKRTGGVGGVGGVGGVGGVGSVGGAAEAGPAATGILGYGGFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANESFLYKCNQCGLTFPNSWSVAYHRKKVHGKTGTEDGGGTTKIAKNDHKIPCRDCSEVLPNKNALYAHRQKEHSNMSLSMSDDQNAGDAPVRAPAPRATSCCKCGHNFSEPSALQRHLNEVHGHERASGHACAVCGRAFRSASVRNEHLRVHTGERPFACDVCGLAFRRSTAMRNHRLIHSGVRAWPCPRCPKRFRIRSDLRTHLRLKHPTRLIVLEIAGLNPSHDEVMQHIRDNNVTEGRILEITKMSFEKGTTSLVPTTARALSLLSAVPRTKITTETPLQINTGK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -