Basic Information

Insect: Lamproptera curius
Gene Symbol: -
Assembly: GCA_029286875.1
Location: JAGSMT010000018.1:1720080-1743183[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.00015 0.023 16.3 1.1 2 23 185 206 184 206 0.95

2 10 0.00035 0.056 15.1 5.6 1 23 212 234 212 234 0.99

3 10 7.4e-05 0.012 17.3 2.1 1 23 241 263 241 263 0.99

4 10 4.3e-06 0.00068 21.2 0.3 1 23 269 291 269 291 0.93

5 10 4.8e-06 0.00077 21.0 0.1 1 23 297 319 297 319 0.95

6 10 1e-06 0.00016 23.2 1.6 1 23 325 348 325 348 0.96

7 10 0.00016 0.025 16.3 1.8 1 23 354 377 354 377 0.95

8 10 1.2e-05 0.0019 19.8 1.2 2 23 384 405 383 405 0.97

9 10 9.5e-06 0.0015 20.1 1.0 1 23 411 433 411 433 0.97

10 10 0.0029 0.47 12.2 0.2 1 22 439 460 439 460 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.00015	0.023	16.3	1.1	2	23	185	206	184	206	0.95
2	10	0.00035	0.056	15.1	5.6	1	23	212	234	212	234	0.99
3	10	7.4e-05	0.012	17.3	2.1	1	23	241	263	241	263	0.99
4	10	4.3e-06	0.00068	21.2	0.3	1	23	269	291	269	291	0.93
5	10	4.8e-06	0.00077	21.0	0.1	1	23	297	319	297	319	0.95
6	10	1e-06	0.00016	23.2	1.6	1	23	325	348	325	348	0.96
7	10	0.00016	0.025	16.3	1.8	1	23	354	377	354	377	0.95
8	10	1.2e-05	0.0019	19.8	1.2	2	23	384	405	383	405	0.97
9	10	9.5e-06	0.0015	20.1	1.0	1	23	411	433	411	433	0.97
10	10	0.0029	0.47	12.2	0.2	1	22	439	460	439	460	0.97

Sequence Information

Coding Sequence: ATGGACGCAGAGAACGGATCGATTCTACGCGTGGTATCCGGTCAGAAGCTTATCTATGGCGGCAGTGAAATATCGCTGGTTGTGCCACAAGACGGCTCCGATGGGGATGGTcaagAATCGAACGATGAACAGATAGAGTTACAGGTATCTGGTGATGAAGAAACCGCTAATGCGATCATCGCCGCTGCACAAGAACAagGTGGCGCATTCATCAAAGTGGAATCGGGCGAGATGTTCCAAGTGAAATCGGTGCAAAGCAAGACTGGATCGGAGAGTGAGAGGAATGATGATGGCAACCCGGATAAGACATCTTTTGGAATATACTCGctGGTGTCGAAACTAGTAAGGGGCAGATTTAATTGTCTTCTCTGCCAGAAGGAAAACAAAAgTTTTGAAGGGGAAGCGTCGATTTTGTCCCAACACTTGCAATCTTCGCATGGGACGCAAGTCTATCCCTGTGACTCCTGCCGCCTCATGTTCCTGGAAGAGCAGGAATATCTCGACCATTTGGagAAATACACGCACAAAATGGCGGAAAGAAGCAAGGCGCTCGTGTGTCCGATCTGCAAGAAGAAATGCAGcTCGAAGCAGCTCCTGAACGAGCACGTGAACGCGCACAGCGGCGTCAGACCGTACAAATGCAAGCTCTGCGACAAAACCTTCGCCTCAAAATACACACATCAGTCACATCTGAAGACGCATCTcGATCGTCCTAGGCCGTTCAAGTGCGAGCAATGCGGAAAATCGTTTCTCACGTACCAGAATCTAAGTCAGCACGAAAAGACGCATTCCGGTGTGAAGGACTACATCTGCAAAGTCTGCGGAAAAGCTTTCGGGACTCAACACAATTTGAAAGTGCATGGAGTGGTCCACTCTGGCAGTAGACCATTTCTATGTGGCGTTTGCGGAAAGGCGTTCGCGAGGAGGGCCGAAGTGAGAGATCATATGCGGATACATACTGgcGAGAGGCCATTCTCGTGTGAGATTTGCGGCGCAAGCTTCACACAGAGATCGAACCTGCATTCGCACAGGAGGGCGACGCATTTGGACGACAAGCGCTACAAGTGTCAACTTTGCCCGAAACGATTTAAGAGAAGGAGATTGTTAGATTATCACGTGAAGGCCTCTCACACCGGCGAGCGACCGCTGCAATGCGAAATATGCAAAGTGACTTTCGTATATCCGGAACATTACAAGAAACATTTGAGAATACACAGTGGAGAGAAACCTTACGTTTGCGAGGTCTGCGGCAAATCCTTCAACTCCCGCGACAATAGGAACACGCACAGATTCGTTCACAGCGACAAGAAACCTTATGAGTGTCTAGTATGCGGCGCCGGTTATATGAGGAAACAGCTATTGTATCATCATATGAACACGAGTGTAATCCCGTCAACAGCGACAGTGGTCCTCCAAGCCGGAATAGGGAACGCGCCAACCGTCACAGTCGCGGACACAattttCGACACGACAAATGGCCTACAACTTGCCACTACCGAAAAATCTGTGGGACAAGGGACGGAAAGTGCTAACCTTTTTATATCTGACGACAAAATCATCATACAGGACAGTAAATCAACGTTGAACCTCGTCCAAGACAATGCGGAGGCGTCGCTTTTGACGTTACataacaTCGAGGACGATAAAGGCAACTCGATCCTGGACTCCGTTACCGCCGAACAGCTCGTTAACGCTCAGtcTGAGGGGATAATGGCGGAGGGAGCGCAGGCTGATGGAATCTTTCGTTTGGTACAAGTACGTTTGCCCGATGGAAGGAGTGGATGGTTGGCGGTCGATTCCTGA
Protein Sequence: MDAENGSILRVVSGQKLIYGGSEISLVVPQDGSDGDGQESNDEQIELQVSGDEETANAIIAAAQEQGGAFIKVESGEMFQVKSVQSKTGSESERNDDGNPDKTSFGIYSLVSKLVRGRFNCLLCQKENKSFEGEASILSQHLQSSHGTQVYPCDSCRLMFLEEQEYLDHLEKYTHKMAERSKALVCPICKKKCSSKQLLNEHVNAHSGVRPYKCKLCDKTFASKYTHQSHLKTHLDRPRPFKCEQCGKSFLTYQNLSQHEKTHSGVKDYICKVCGKAFGTQHNLKVHGVVHSGSRPFLCGVCGKAFARRAEVRDHMRIHTGERPFSCEICGASFTQRSNLHSHRRATHLDDKRYKCQLCPKRFKRRRLLDYHVKASHTGERPLQCEICKVTFVYPEHYKKHLRIHSGEKPYVCEVCGKSFNSRDNRNTHRFVHSDKKPYECLVCGAGYMRKQLLYHHMNTSVIPSTATVVLQAGIGNAPTVTVADTIFDTTNGLQLATTEKSVGQGTESANLFISDDKIIIQDSKSTLNLVQDNAEASLLTLHNIEDDKGNSILDSVTAEQLVNAQSEGIMAEGAQADGIFRLVQVRLPDGRSGWLAVDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -