Basic Information

Insect: Lamproptera curius
Gene Symbol: -
Assembly: GCA_029286875.1
Location: JAGSMT010000109.1:1456646-1469010[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00062 0.099 14.4 6.5 1 23 196 218 196 218 0.98

2 12 1.4e-06 0.00023 22.7 0.4 3 23 232 252 231 252 0.98

3 12 0.00022 0.034 15.8 3.1 2 23 261 282 261 282 0.98

4 12 0.00025 0.039 15.6 2.0 1 23 288 310 288 310 0.97

5 12 3.5e-06 0.00056 21.4 0.8 1 23 316 338 316 338 0.98

6 12 1.3e-05 0.002 19.7 8.4 2 23 345 366 344 366 0.97

7 12 2e-06 0.00032 22.2 1.3 1 23 395 417 395 417 0.99

8 12 0.00025 0.039 15.6 0.7 1 23 423 445 423 445 0.98

9 12 0.0014 0.22 13.3 0.7 1 23 451 473 451 473 0.97

10 12 0.00085 0.14 13.9 0.7 3 23 481 501 479 501 0.97

11 12 0.00058 0.091 14.5 4.3 1 23 507 529 507 529 0.99

12 12 0.00029 0.046 15.4 3.7 1 23 578 600 578 600 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00062	0.099	14.4	6.5	1	23	196	218	196	218	0.98
2	12	1.4e-06	0.00023	22.7	0.4	3	23	232	252	231	252	0.98
3	12	0.00022	0.034	15.8	3.1	2	23	261	282	261	282	0.98
4	12	0.00025	0.039	15.6	2.0	1	23	288	310	288	310	0.97
5	12	3.5e-06	0.00056	21.4	0.8	1	23	316	338	316	338	0.98
6	12	1.3e-05	0.002	19.7	8.4	2	23	345	366	344	366	0.97
7	12	2e-06	0.00032	22.2	1.3	1	23	395	417	395	417	0.99
8	12	0.00025	0.039	15.6	0.7	1	23	423	445	423	445	0.98
9	12	0.0014	0.22	13.3	0.7	1	23	451	473	451	473	0.97
10	12	0.00085	0.14	13.9	0.7	3	23	481	501	479	501	0.97
11	12	0.00058	0.091	14.5	4.3	1	23	507	529	507	529	0.99
12	12	0.00029	0.046	15.4	3.7	1	23	578	600	578	600	0.99

Sequence Information

Coding Sequence: ATGGCTGCTGTTAATAAAGCTGTGCCGTTAAATTTAGATAAAGTGTGTCGCGCgtgtttactaataaaaaaggaTATGCGACCATTATTCGAACAACTCACTGCTACAATGTTGATGGAAATATCGAAGGTGCAGGTGTCGGTAGGCGATGGGTTGCCATCACAGTTGTGCCTGCAGTGCGTTCACCAGATATCGCGGTGTCACGCCTTCAAGGAGATGGTGGAGCGGAATGACGTCACGTTGCGTGATCAAGTGAAAAACGCAGCAGAGGAGGCGCTTAAGAAGGAGACCTTGGCAATGAACTGCACGGAGCAGTCCCAGTTCATCCAGTACATCGAGGTACCGCTTCTGAGCAGCAACAACCAGATATTGGACGGTTTCTTCACGACCGGCAACGAGCAGAGTCAAGTCACTGAACAGCAGATCATGCAGAAGGAGGATGGATTCGATATAGAAAAGATCGGAGTTCAAGAGCCTCAGCCTCAGGTCCATGCGGAAGTGGCGAAGAACGATCTGAACATGGACGAGGACAACTACATGCAGCTTGTGGTGTTCCAAGTGACCTCCTCAGTATCGCCAGGGAGGCATGTTTGCAACTTGTGCCACAAGGAGTTCAAACATGGACGGTGGCTGAAGCTGCACATGCGCTCACACTCTAATTGGATAAAGGCGAACTGCAAGCAGCCGCCCATGTGCCCGATTTGCAAGCGAACATTCAAGGGCCCCGGAATGCTGCGCATGCACATGCGCACCCACGAACAGCGTCCCCCCAAGCAGCCGACATGCTCCGTGTGCCAGAGGACCTTCCAGACCAAGACGCTGCTGTACAGGCACAGGCAGACGCACTTCGAGCAGAAGACGCACCAGTGCACAGTGTGCGACAAGCGCTTCTTCAGCGGATACGCGCTAAGATCGCATTTGGCAAGGCATAGGGGCGAGAGGCCCTACGTGTGCTCCATTTGCTCCAAGAGCTTCTATAACCCTACAGATCTCAAGGTCCACTTCCGCCTGCACACCGGGGAGAAGCCGCTCAAGTGCTCGGAGTGCAACAAGACCTTCCGCCGCCACTCGACCCTCTGCCAGCACATGAAGAAGCACCGCGGCATCAGGAACCATTCACTCATGCTCGTCTGCAAGGGCTTAGAGGTTCTAATGCTTCAATCGACATGTCGCGAGCGTCCGTTCGAGTGCCAGTACTGCGAGCGCAAGTTCGCGCAGCAGTCGGCGCTCATCTACCACCGGCGCACGCACACGGGCGAGAAGCCCTACACGTGCAAGCTCTGCCCCGCCAAGTTCACCACCTCCTCCGCCAGGAACAACCACCTCGTCACCCACACGGGCCACAAGAGGTTCGTGTGCCCGGTGTGCCTGAAGGGCTGCACGAGCCGCGCCGAGCTGCGCGTGCACTCGAGCAAGCACACGGGCGAGAAGCTGTTCGGCTGCGAGGTGTGCGCGCAGCGCTTCAGCTCCGCCTCGTACCTGGCCGTGCACCGGCGCCACCACACCGGCGAGCGCAAGTACCGCTGCGCGCACTGCGGCAAGGGGTACATAGAGTCGTGCGCGTACAAGAAACATTTGAAAACGCACGAGGGGAAGGAAACCGAACCCGGGACCGCTGAGCTGTCCGACCAAGTGGTGAACAAAGAGGGGGAGGTGAAGGTGCAGGACCTGGTGACCCTGGATGAGGAGCAGCTCCAGCCCCAGGGTCAGAGCCAGGAGGGCCAGAGGCGCTTCAAGTGCGGCCTTTGCGTCAAGACCTACATGTATCTCCACAGTCTCAAGAAGCACATGATGACCCACATACCGCAACAGCAGCAACAGCAGCAGCAACAACAACAGCAACATCAGCAACAGCAACAGCAACAACAGCAGCAACACCAAACACAACAGCAACATCAGACGCAGCAACAGCACCACCAGatgcagcagcagcagcagccgTCGCACCTGCAGCAGCAGGTGGTGCAGGTGGGCGGTGTGCCGCAACTCGCTCTGCACGCACAACACGTGCAACAAGGCATCGCCGTCTCAGGGGTACAGGGGCAGCACACATACCCGGTGATATCGTCCGTGCAGTCCTTACAACTCCAACAGACGCATCAACAAGTCAATACGCAGCAACAACCACAGCAACTGCAAGTGCAAACCATACAGATACACCCTCAGCATCAGCCCATACAGATACATGCGGTGGGAGTGCAGCAAGTGCAGCAGCAACAGCTGCACGTCGCCACCTCCACTTGCCAGACCATGTTGCCGAACATCCTGCAGCTCCAGCCTGCGACGGTGGCGGTGTCCGGTCTTGGGCAGCAGGAGCTGGGCGGAGTGGCCCATCGCATCATACTCCAACAACCGTCTTCACATCCAGCCTTATATACGATACATCATTAG
Protein Sequence: MAAVNKAVPLNLDKVCRACLLIKKDMRPLFEQLTATMLMEISKVQVSVGDGLPSQLCLQCVHQISRCHAFKEMVERNDVTLRDQVKNAAEEALKKETLAMNCTEQSQFIQYIEVPLLSSNNQILDGFFTTGNEQSQVTEQQIMQKEDGFDIEKIGVQEPQPQVHAEVAKNDLNMDEDNYMQLVVFQVTSSVSPGRHVCNLCHKEFKHGRWLKLHMRSHSNWIKANCKQPPMCPICKRTFKGPGMLRMHMRTHEQRPPKQPTCSVCQRTFQTKTLLYRHRQTHFEQKTHQCTVCDKRFFSGYALRSHLARHRGERPYVCSICSKSFYNPTDLKVHFRLHTGEKPLKCSECNKTFRRHSTLCQHMKKHRGIRNHSLMLVCKGLEVLMLQSTCRERPFECQYCERKFAQQSALIYHRRTHTGEKPYTCKLCPAKFTTSSARNNHLVTHTGHKRFVCPVCLKGCTSRAELRVHSSKHTGEKLFGCEVCAQRFSSASYLAVHRRHHTGERKYRCAHCGKGYIESCAYKKHLKTHEGKETEPGTAELSDQVVNKEGEVKVQDLVTLDEEQLQPQGQSQEGQRRFKCGLCVKTYMYLHSLKKHMMTHIPQQQQQQQQQQQQHQQQQQQQQQQHQTQQQHQTQQQHHQMQQQQQPSHLQQQVVQVGGVPQLALHAQHVQQGIAVSGVQGQHTYPVISSVQSLQLQQTHQQVNTQQQPQQLQVQTIQIHPQHQPIQIHAVGVQQVQQQQLHVATSTCQTMLPNILQLQPATVAVSGLGQQELGGVAHRIILQQPSSHPALYTIHH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -