Lcur013975.1
Basic Information
- Insect
- Lamproptera curius
- Gene Symbol
- Zfy1
- Assembly
- GCA_029286875.1
- Location
- JAGSMT010000045.1:955395-958376[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.0002 0.031 16.0 0.6 1 23 122 144 122 144 0.98 2 18 0.00017 0.027 16.1 2.0 2 23 151 173 150 173 0.92 3 18 1.1e-06 0.00017 23.1 1.1 1 23 179 201 179 201 0.97 4 18 5.3e-07 8.3e-05 24.0 1.5 1 23 207 229 207 229 0.99 5 18 0.00022 0.035 15.8 0.5 1 23 235 257 235 257 0.98 6 18 0.005 0.79 11.5 5.4 1 20 263 282 263 285 0.92 7 18 2.4 3.8e+02 3.1 0.1 1 13 291 303 291 307 0.87 8 18 0.086 14 7.6 0.4 2 23 360 380 360 380 0.96 9 18 4.4e-05 0.007 18.0 0.3 1 23 386 409 386 409 0.96 10 18 6.7e-07 0.00011 23.7 4.0 1 23 415 437 415 437 0.98 11 18 1.3e-05 0.0021 19.6 0.3 1 23 443 465 443 465 0.99 12 18 0.26 41 6.1 0.0 2 23 499 520 498 520 0.93 13 18 0.0037 0.59 11.9 0.2 2 23 680 701 680 701 0.97 14 18 0.0018 0.28 12.9 0.1 1 23 707 729 707 729 0.95 15 18 0.0013 0.21 13.3 0.5 1 23 735 757 735 757 0.93 16 18 0.0039 0.62 11.9 2.8 1 23 763 785 763 785 0.97 17 18 0.002 0.32 12.8 6.1 1 23 791 813 791 814 0.95 18 18 9.1e-05 0.014 17.0 1.4 1 23 818 841 818 841 0.97
Sequence Information
- Coding Sequence
- ATGCAAGGCCGCCTTAACTCGACCCATGACGGAGGTGTTGATGTCGACGATGAATCTGGCGACGACGAACCCCTGGCCGCGTTGGCCGCTAAAAAGTCGACGGACTTATACCAAAATTTCTATAAAGCTCTTGTTAATTTTGGAAACCATTTCATATCAGAGCACCGGCATGATGACGGTACATCGTACACCGATTCTAGTGATTCTGAAAAGATCGAGGAGGATCTAGTTGGAGAAGTCAGCGAAACTGAGGTGGAAGACTACGACGACCTTAGTGCACACAACATGCGAAAGGATCGGATGGATGAGCAAACTAGGTTGGAATTGTTCAGTGCTCAGCGTCGTACAGATGGCAAGATGTATTACGTATGCAATATTTGCGACAAAAGACTCAGTTCGGCAAATTCGTATATATACCACAAGCGGATACACACGGGCGAGAAACCGTGCGTCTGTCACATATGCGGGAAGCAGTTCCGAGCGCCGAACGGGTTACAGCGACATCTGACTGAGACACACGAACGGTTAAAACGACACCCGTGCGGCCTCTGTCCAAAGAGCTTCGCGAACACGCAGAATTTGAAGCAACACATTCGCACGCATACTGGCGAACGGCCGTACGTATGCGCGCGCTGTGGCAAACGGTTCACTCAGAGCGGGTCTTTGCACGCCCATCTAAGGACGCACAGCGAGCAGTTTCCATACCAGTGCGTGGAGTGCGGCGCCAAATTCCGCCTACGGTTCGCCCTCGCCAGGCACAGGCTTAAACACACTGGCGAGAAGCCTCACGCGTGCCAGCAGTGCGGGAAAGCGTTTAGGCAACGACACGATTTGTACAGCCACACGCTCTGCCACGGCGACCCTAAACCCCACGCGTGCACAATCTGCAGCGCCGCTTTCAGACATCCCCCGCGCTTTGAAACACCATTTACAATTGtcattgaaattgaaaatgaaGTGAAATTGAAAACAGTAGACCAGACCGACAGAGAAGACTCACAAGGAAGTGACCAAAGAGATATAGACTTCGCCACGAACCCTCGTACGGTGATTGGAGATGATGGAAAGAAGTACGCGCAATGCCCCACCTGTAACAAGAGTGTGTCGATCGGTTTTTGGAGGAGGCATGCTAGGACGCATCTCGGCGAAAAGAGATACAGCTGTCACGCTTGCGGCCTCTCATTCAGTGAAAGTGGTAACTTAGCGAGGCACGAGAGGGCACTTCACGCTAAACATCGCCCCTTCACCTGTAACGTTTGCTCCAAGACCTTTACGAGGAGCAGCCATCTTCAAGACCACGTCAAATCACATTCGGATAGTCGGGACTACGTATGTGACACGTGTGGCAAAGCTTCAAAATCGTCAGCGGCGTTACGCATGCACAGAAAGACACACGAGGACGAGTGTAGGTTCCGGGGAAACGCGTTCGCGGCGCAAACTCCGCACCCTTCGCCGCACACTGATCACACAGACGACCTCAAAGGGCCAAGAAAAACGTGCGGATATTGTCCTCTGGAATTTCCTGCCGCAGAATTAACAAATCACCTGATCAATGCCCACTCGGATTTGCTATTCCATTGCAATGTTTGCAATTCTTATTTGGACAgaaaagtttattcattacatgtATCCGCGCACAATGCTCTTCAGATCGCGGGTAGCAGCGACAAAGACGCTAATAGGAAGATTAATagaacgaaaaaaattaaaaacagcaaGGACAAGAAAGACTACGCAGTAGGCTCAAATAAATCAAAGACATCACAAAATAAAGCTACACCAGAGAAGTCTGGGCGAAAATCAGAGGGGAGTGGAGTGGTTAGCGATAAGAACCTAAGTAATGAATTTTCGGACCATAGCGATGTCGAATATTTCGGACCGCTGCCGCAATCGGTTTTCCAAGCGATCGAAGATGCTCAAGACAGCCACAGCGAAGAAAGTGACCGTCACTCGCCGTCCATTCCAGTAGAGGAGACAGACGAAACGAACCAGACGGCATCCGATAAAAGGCAGCCCAAAAAACCCAAGCAAACACGCACCTGCCCCGTCTGCGCAAAAGTGTACACGGCGTCATCCAGCTACTTCTACCATTTGAACTCGCACCGCCAAAGCAAGGAGCACATCTGCGACGTCTGCGGCAAGAAGCTCGGCAGCCGGAGCAGTCTGGTGCAGCACGCGGCGGTGCACGCGAGCGAGGGAAGCTTCGAGTGCATCGAGTGCGGCAAGAAGTTCAGATCGCGAGCGAGCCTGTACATCCACAGCGAGAGTCACGGGGGCAAGAAAAACTTCGCCTGCGACCAGTGCGACAGTGCGTTCAGGTGGCGGACGCATTTGAAACGCCACCTGAAGAGGCACTCGGCCGAGAAGAGCCACGTGTGCACAACTTGCGGCCGCGGCTTCAACGTGCGCTGCGACCTGTTGCGACACTCGCGCACCCATCACGTCGGCAGCCACGTGTGCGATCAGTGCAACGCCATATTCGCACAGCGCAGGTACTTGAAGGCGCACATGATGAAGAAACACTCCGTGGAGATAAGTGGCGTCGAAGAGGcgaaataa
- Protein Sequence
- MQGRLNSTHDGGVDVDDESGDDEPLAALAAKKSTDLYQNFYKALVNFGNHFISEHRHDDGTSYTDSSDSEKIEEDLVGEVSETEVEDYDDLSAHNMRKDRMDEQTRLELFSAQRRTDGKMYYVCNICDKRLSSANSYIYHKRIHTGEKPCVCHICGKQFRAPNGLQRHLTETHERLKRHPCGLCPKSFANTQNLKQHIRTHTGERPYVCARCGKRFTQSGSLHAHLRTHSEQFPYQCVECGAKFRLRFALARHRLKHTGEKPHACQQCGKAFRQRHDLYSHTLCHGDPKPHACTICSAAFRHPPRFETPFTIVIEIENEVKLKTVDQTDREDSQGSDQRDIDFATNPRTVIGDDGKKYAQCPTCNKSVSIGFWRRHARTHLGEKRYSCHACGLSFSESGNLARHERALHAKHRPFTCNVCSKTFTRSSHLQDHVKSHSDSRDYVCDTCGKASKSSAALRMHRKTHEDECRFRGNAFAAQTPHPSPHTDHTDDLKGPRKTCGYCPLEFPAAELTNHLINAHSDLLFHCNVCNSYLDRKVYSLHVSAHNALQIAGSSDKDANRKINRTKKIKNSKDKKDYAVGSNKSKTSQNKATPEKSGRKSEGSGVVSDKNLSNEFSDHSDVEYFGPLPQSVFQAIEDAQDSHSEESDRHSPSIPVEETDETNQTASDKRQPKKPKQTRTCPVCAKVYTASSSYFYHLNSHRQSKEHICDVCGKKLGSRSSLVQHAAVHASEGSFECIECGKKFRSRASLYIHSESHGGKKNFACDQCDSAFRWRTHLKRHLKRHSAEKSHVCTTCGRGFNVRCDLLRHSRTHHVGSHVCDQCNAIFAQRRYLKAHMMKKHSVEISGVEEAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -