Lcur030034.1
Basic Information
- Insect
- Lamproptera curius
- Gene Symbol
- -
- Assembly
- GCA_029286875.1
- Location
- JAGSMT010000209.1:1109516-1116870[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.9 3.1e+03 -0.8 0.1 30 38 47 55 44 58 0.80 2 2 7.2e-08 7.6e-05 23.6 0.0 3 41 134 171 132 175 0.90
Sequence Information
- Coding Sequence
- ATGTCGGTCAAGGACGTCACGTCGATAGGTGAGAGCCCCGTTGGGTTCGGTGATCCCTCCATCGTCAAGATTGATGTTAGCAAGCTAATTGTAGTGTTAAAGTGCTCGCAGATCATTGGTAACTTACTGTCGCTATGCAAGTCGACGCTGCGTCGATACCACCGAGCCACGGGTTGCAAGCATCTGTTTGCGCAACGCCAGTCGAATTCCCGCCGCGTCGACTTCAAATTTGGAACGATCAAATACGATCCCGCGCGCGCGTTCTATTTCGGTGACGCGCGCTCGCACCGAAATAGCCCCGGCGTCCGTGGCACGTTGATGCGCCGCGGATTACGGACGTATTGCAAGAAAATGGTGCGAAATCGTAAGAGGAAGACAGATTACGGTCTTCATAATGAAAAAGATATGGCGGAAGCGATTTTGTTGGTTGAAAGTGGTTTGAGTCTTCGAAAAGCTGCAAATGAAAAGcatgttaattttatgacattgcAAAGATACgttcaaaagaagaaaaatgttCTGAGGATGAAGGACATATGGACTTACTCCAAATTATGCCAATAG
- Protein Sequence
- MSVKDVTSIGESPVGFGDPSIVKIDVSKLIVVLKCSQIIGNLLSLCKSTLRRYHRATGCKHLFAQRQSNSRRVDFKFGTIKYDPARAFYFGDARSHRNSPGVRGTLMRRGLRTYCKKMVRNRKRKTDYGLHNEKDMAEAILLVESGLSLRKAANEKHVNFMTLQRYVQKKKNVLRMKDIWTYSKLCQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -