Lcur032739.1
Basic Information
- Insect
- Lamproptera curius
- Gene Symbol
- -
- Assembly
- GCA_029286875.1
- Location
- JAGSMT010000324.1:90754-92574[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-11 3.4e-08 34.3 0.0 1 39 10 48 10 53 0.91 2 2 7.2 7.6e+03 -2.0 0.0 9 16 124 131 124 132 0.81
Sequence Information
- Coding Sequence
- atgccTCCCATCAAAAGGAAGACCTGGGACCACACTGCCATGATACAGGCTGTGAATGCAGTACAGAAGAAAAGAAATGGGTACTTAAGAGCTGCAAAACGATTTGGTGTTCCTAAAGGTACCCTTGAGCGCTATGTGAAAAAAGATGTCCGTGCAGAAGATCTTGTCCAGGTTCCTATGGGGAGACGACCAGCCTTACCTATTGATTTAGAAGCCGAGCTGAAAAaAAAAGTTGAAGAAGTTAGTTCCAGTTCCGAAGACGATGACATGCCTGAGCTCGCACATAGCAGTGGGGATGAATATGATGCTGAATGTCCCTACTGTAGCGGCAACTTTTCACAGGATACTAGAGGAGAAAATGGGCCAAATGTCAAAGCTGTTTTAAATGGGCTCATGAGGATTGTGGAGATGTAG
- Protein Sequence
- MPPIKRKTWDHTAMIQAVNAVQKKRNGYLRAAKRFGVPKGTLERYVKKDVRAEDLVQVPMGRRPALPIDLEAELKKKVEEVSSSSEDDDMPELAHSSGDEYDAECPYCSGNFSQDTRGENGPNVKAVLNGLMRIVEM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -