Lcur027955.1
Basic Information
- Insect
- Lamproptera curius
- Gene Symbol
- -
- Assembly
- GCA_029286875.1
- Location
- JAGSMT010000168.1:1775510-1789342[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.5e-11 1.6e-08 35.3 0.0 2 39 161 198 160 203 0.87 2 4 7.1e-12 7.5e-09 36.4 0.2 2 39 214 251 213 254 0.93 3 4 1.9e-14 2e-11 44.6 0.0 2 45 269 313 268 313 0.96 4 4 9.2e-17 9.7e-14 52.0 0.0 1 42 320 362 320 363 0.96
Sequence Information
- Coding Sequence
- ATGCCCGGCTACGGACCTTTACAAGTGAAATGCAAGCCGCGGTCAGATGGAGAGGACAGCAATTCACAATTCGCACAAAATTTTCTCAATAATCAGttcTCAACATCAGAACTGCTGGGGATTAAGTTGGAAGCACTGGACAATTCGGAGGACCACTCACCGTCGCAGATTCTACGTCATTTGCAGGTGGGTGAGGAATTGGAGCTGACCCCGTTGACGCCTGCGGGACCATCAGCGACGCCAGTGTGCGCCCGCCGCGTGCCCCCGCCTAGGGCTTCGCCTGAATCCCTGGAGACCCTCGAGCCGGCGCGAGCCTCCACGGGCACTACCCTACTTGATCAGCGTATGCAGCTTCTCGATCCGGGCGATGATTTTGGTCCGTTGCTGTCCGTCAAGGACGAGCCCCTCTCTGAGGGTGAGCCCCAGCTGAGCGACGAGGCGGAGACGGAGGAGAGCCGCGGCAGCCCCAAGAGCTGGTCCCCGAGGGACATGGAGCGCGCGCTGCAGGCGCTCAGGGACCGCCGCATGAGCCTCACCAAGGCGTCGTCGGCGTACGGCATCCCGTCCACCACGCTGTGGCAGCGCGCGCAGCGGCTGGGCATCGGCACGCCGAAGCGCGACGCGCCCAAGGGCTGGGGCGAGGGCGAGCTGCGCGCGGCGCTGCTGGCGCTGCGCAGCGGCGCGCTCTCCGCCAACAAGGCCAGCAAGGCCTACGGTATCCCAAGCAGCACCCTGTACAAGATCGCGCGCCGCGAGGGCATCCGCCTGGCGGCGCCCTTCAACGCCGCGCCCACCTCGTGGCGCAGAGGCGACTTGCAGCGCGCGCTCGCCGCAATCCGCTGCGGCGCGGCCTCCGTGCAGAGGGCGGCCGCGCAGTTCGGGATACCCACGGGCACCTTATACGGGAGGTGCAAGCGGGAGGGCATCGAGCTGTCTCGCTCCAACCCTACGCCGTGGTCAGAGGACGCCATGGGGGAGGCCTTGGAGGCTGTCAGGATAGGGCAGATGTCGATCAACCAAGCGGCCATCCACTTCAACCTGCCGTACTCCTCGCTGTACGGGAGGTTCAAGCGCTGCAAGTACCAGATGCCGGTATATCACTTCGGTGGGTCCACAGGCCCCCTCACCGCAATGCATCAACCAGCCCGAGGCGTCTTCCTGCGCGGAGGCGCCTCCGTCCGAGCCGGGGGGCTGGTGGGCGAGCGGCGCCACCACGCCCTGCAGTCAGCTGCTGGGCGAGGCGCACCAGATGCTGCTGGAGCAGCAGCACGGCTACTACGGCCTCGCCACCAGCTGAGCGGCGCCACCACGCCCTGCAGCCAGCTGCTGGGCGAGGCGCACCAGATGCTGCTGGAGCAGCAGCACGGCTACACGGCCTCGCCCACCAGGCCGAGCGGCGCCCACCCGCCCCTGCAGCCAGCTGCTGGGCGAGGCGCACCAGATGCTGCTGGAGCAGCAGCACGGCTACTACGGCCTCGCCACCAGCTGAGCGGCGCCACCACGCCCTGCAGCCAGCTGCTGGGCGAGGCGCACCAGATGCTGCTGGAGCAGCAGCACGGCTACTACGGCCTCGCCACCAGCTGA
- Protein Sequence
- MPGYGPLQVKCKPRSDGEDSNSQFAQNFLNNQFSTSELLGIKLEALDNSEDHSPSQILRHLQVGEELELTPLTPAGPSATPVCARRVPPPRASPESLETLEPARASTGTTLLDQRMQLLDPGDDFGPLLSVKDEPLSEGEPQLSDEAETEESRGSPKSWSPRDMERALQALRDRRMSLTKASSAYGIPSTTLWQRAQRLGIGTPKRDAPKGWGEGELRAALLALRSGALSANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTSWRRGDLQRALAAIRCGAASVQRAAAQFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRIGQMSINQAAIHFNLPYSSLYGRFKRCKYQMPVYHFGGSTGPLTAMHQPARGVFLRGGASVRAGGLVGERRHHALQSAAGRGAPDAAGAAARLLRPRHQLSGATTPCSQLLGEAHQMLLEQQHGYTASPTRPSGAHPPLQPAAGRGAPDAAGAAARLLRPRHQLSGATTPCSQLLGEAHQMLLEQQHGYYGLATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -