Basic Information

Gene Symbol
-
Assembly
GCA_029286875.1
Location
JAGSMT010000098.1:954575-966321[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.4e-13 8.1e-10 40.2 0.0 2 89 252 326 251 326 0.91

Sequence Information

Coding Sequence
ATGAAGTTGTCACTGGATGAAGATCCATCCTCCTCTTTAGTCCATAACGAGGACGAGGTGCTGGCGATAAACGACAAGGTGGTCCTAAGGGCAGAGGACCTCCTCAGCTGGGTGTGCGACGGCTCCGGTTGGCGGTGGGGCTTGAGGGCGGTGTGGAGGGGAGCCTGCGCCCCACCGGCCGACGAGGCCAGCCCCACGGCGCCGCTGCATCACACAAGGCTGGACTTCAGCGACGTGGAGAGGGAGAAGAATACGATGACGGTGGACGCGGACAGTCCTGGCGTGATGGTCTTCTCCTATCCGCGCTACTGCCGCTACCGGGCGCTGGTCTCCAGGCTCGAGGGCATCCAGGCCGACTGGTTGAGGGACTCGCTGGTGGCGGCCCTTGGCGGGTACGCGGCGCCTACTAAGAACACCAGGATATTGTACTGTAAGGAAACCTTCGAGTACCCAGAGCTCGAGGGTCACGAGTTCGTGTGCAACCACCTGGCGCCGAAGCTGAAGGGCAGGCCGAGGGGCAGGCGGCGGAGGGCGAGGTCCCGCTCCGCCACGCCCTCGGACGAGGAGGCGGAGCGGCAGCAGCAGAGGCCGCAGCGCCAGCAGCAGCACAGGGCCTACGAAACCGCGACCCCGCGCCGCCTCTCCCTCCGCAACTGCGTCAAACGCAGCGAGGACGAGGACGAAGACCTGGAGAAGGAGACGAAGCCCAAGACTGAGGGGTTGGAGGTGGAGGAGGAGGCGGAGACGGAGGAGGAGAGACAGTTCCTCCACCAGCTGAGGCAGTTCCACAGGGGAAGGCACGAGGGCTTCAAAATGGCGCCCACGCTGAAGCACCTCTCCCTCCGCGCTCTGTACCTCGGCGTGAGCGCAAAGGGGGGCTACGAGGCGGTGTGCCGAGGCCGCCAGTGGGCCACGCTGTGCGCCGAGCAGCCGGCCAGGGCGAGGAGGCACTACGAGAGGTTCCTCCTGCCCTTCGAGAACCACGAGCGTCGCAGACTGGCCCAGCACCACAACCACCACCAGCACCAGCACCAGTACCGCCAGCCCAACGGAATACCGACCAGCCCTGAACCCAGGACCGTGGACACGATCGAGGTGCATGAGTCTCCGCCACCAGCTCGTGACCTGGAGACGGGCGAGGAGGTGGCCGAGGCGAAGGTGCCGAAGATCAGCGTCAGGCCGGTGGAGAGGCTCAACGAGGGTGCAGCAGGCGACGGTCGCTGGGGCTCCAAACACCATCTCCGGAACCCCAGCCAAGCCCACGTGTgcgcccagcgtgGTACGGCAGACCCACCGACGCCTCAGCATGAGGATCGGCGCCTGACCAATGGCCAGCCGCCTCTGACTCCAATCGACCAGCGAGCAAGGCCGGTGGGTAGAAGTTCTCTAAGAGCGGTCAGAGTAAAACCGACAAGACCTCTTTCTACGAATAATCCAGCCAGCTCCTCGCTGAACAACTTCGGCATCCACCACCCGCCCGCGCAGATCACCGCGGTGCCCCCGCTGCCCCCCCCGCCGCCGGCGCCCCCCCTGCCCCCTCCCACCCAGATGGCCTCCATCACGCCCGTGCACGGCGCCCTCGGCACCAGAACGGCGCAGCACTGCAGCGACGACGAGATCGTGGAGGTACCCTACAAGCCGAAAACACCGGAGATAATAGACCTGGACGAGTATCCTGAAAGTCCTCAGTCTATTAAACGCAAAAAGCTTGAGATCCTGAAGGAGCGGGGGTTGGAAGTGACCGCCGTCCCCGCCGTCCCCTCCCCCTGGCCGCCCCGGTCCTATAGCCCCCCTTCTCCTAAGTCCCGTGGTGCAACACCAGCTATTGACCCACGCCCAACTAGTGCAGATGTACGGGCCGCCCAACGGCGTTCAGCCCCTCGTGTCATACAAGCGACCAGCATATTCGGCTCCCCCGGCCCCGAAAAGACCGTGTACGGCAACCCCAAGGACCCGTTCATGCCCCCGCCGCACATAGTCCACGGCGCCCCTCTGCGGCCGGCGAGGAACGTCCCGCCTCCTCCCCTCCCACCTCACGATCCCTTAGACCTAACCTGCAAATCGCCACCTAGAGCCACGGTGGAGATACTCAGGGTGTCGTCCCCCCCTAACGTGGAGGCGAAGATCGGTCCCAATCTGGAGATAACCCTAGTTGGTCCCAAGCCCCGCTCGCCCCCCAAGCGGGCCCCCCAGAAGCGCTCCTCCAACGGCAAGTTCGCGCCGGCCAAGCCTCCCCCCGCCCCCTCCCCCCCGAAGCCCTCGCTAGTGGACCCCTACATGAGCGCCCTCAACAGCCTCGGTCAGATGGACCAGCGCCAATTGGCGATGTACAGGGACTTTGTGGCTAGTCAGTTTAGGGGGTACACTGGTTTGTTGAATATAGGCACGCCCACCACTAAGAATTGA
Protein Sequence
MKLSLDEDPSSSLVHNEDEVLAINDKVVLRAEDLLSWVCDGSGWRWGLRAVWRGACAPPADEASPTAPLHHTRLDFSDVEREKNTMTVDADSPGVMVFSYPRYCRYRALVSRLEGIQADWLRDSLVAALGGYAAPTKNTRILYCKETFEYPELEGHEFVCNHLAPKLKGRPRGRRRRARSRSATPSDEEAERQQQRPQRQQQHRAYETATPRRLSLRNCVKRSEDEDEDLEKETKPKTEGLEVEEEAETEEERQFLHQLRQFHRGRHEGFKMAPTLKHLSLRALYLGVSAKGGYEAVCRGRQWATLCAEQPARARRHYERFLLPFENHERRRLAQHHNHHQHQHQYRQPNGIPTSPEPRTVDTIEVHESPPPARDLETGEEVAEAKVPKISVRPVERLNEGAAGDGRWGSKHHLRNPSQAHVCAQRGTADPPTPQHEDRRLTNGQPPLTPIDQRARPVGRSSLRAVRVKPTRPLSTNNPASSSLNNFGIHHPPAQITAVPPLPPPPPAPPLPPPTQMASITPVHGALGTRTAQHCSDDEIVEVPYKPKTPEIIDLDEYPESPQSIKRKKLEILKERGLEVTAVPAVPSPWPPRSYSPPSPKSRGATPAIDPRPTSADVRAAQRRSAPRVIQATSIFGSPGPEKTVYGNPKDPFMPPPHIVHGAPLRPARNVPPPPLPPHDPLDLTCKSPPRATVEILRVSSPPNVEAKIGPNLEITLVGPKPRSPPKRAPQKRSSNGKFAPAKPPPAPSPPKPSLVDPYMSALNSLGQMDQRQLAMYRDFVASQFRGYTGLLNIGTPTTKN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-