Basic Information

Gene Symbol
Kdm5
Assembly
GCA_029286875.1
Location
JAGSMT010000010.1:6688956-6715381[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.6e-24 8.8e-21 75.3 0.0 2 89 75 158 74 158 0.93
2 2 4.5 1.5e+04 -2.3 0.0 45 68 1263 1289 1250 1300 0.64

Sequence Information

Coding Sequence
ATGGGAAAATGTGACGAAGCTAATGTCGAAGTTAGTATGGGGGACTCGGCGTCCCCCATGAAACCTGATAATTTCACCTTCACCGTGCCACCAGAGGCGCCTGTCTTTGAACCAACGCCTGAAGAGTTCCTAGATCCTTTAGCGTACATCAGTAAAATAAGGCCCATCGCTGAGAAGTCTGGCATTTGCAAGATCAAACCCCCCGCAGCAATAACACGGGTGAAGTTGAACTTCCTGGACCAGATAATCAAGTTCTGGGAGCTCCAAGGTTCGGTCCTCAAGATTCCCACAGTTGAGAGGAAGCCCTTGGATCTGtattcattacataaaatagttaaagaagCTGGTGGTTTTGAAGTATGTTCTGCTGAGAGAAAGTGGTCGAAAATCGCCCGCCGCATGGGCCATCCTCAAGGCAAGGGAATCGGCTCAATTCTGAAGAGTCATTATGAGAGGATTCTATATCCTTATGATGTATTCAAGAACAGTGGTGCTGTTGGAGACAGCAAGGAAACGAAGATCGAGGTGAAACGCGAGCAGACACCAGAGAAGCCGCCCACCTCCGCGGCCCGCAGTAGGTCCGCTAGCAAATGCCCGGCCGCCACGCCGCCCCCCGCGCGTCGCTACAAGAGCTCCGAGCCCGACCCCGTAGCAGAAGGCAGCCATACCGAAGGGGCCCTTCCTGGAGTGGAACGCTCCCTCAGGACCCCTGTGAAGGATGACGTGGAGACCCGTAGGAGTCCTAGGGAGAACAAATGGATGGCGGGCGCAGCCAGCTGTGGTGGGGGCCGCTCGAGACGGTTGAGGGAGCACAGGCTCAGCAATATGACCGTGTCGGTGACGCCAGCGCCCACACCGCAGCCCACGCTTACGACACATAATCCTGATGATCCGCTGGCCAAGTACATGTGCCACGTGTGCGGGCGAGGCGACGTGGAGGAGCAGATGCTGCTCTGCGACGGCTGCGACGACAGCTACCACACCTTCTGCCTGGTGCCTCCGTTGGCCGATGTGCCCAAAGGAGATTGGCGTTGCCCAGTCTGCCTCGCTGAAGAGGTATCAAAACCTGCTGAGGCCTTTGGTTTTGAGCAGGCATCGCGTGAATATACTCTGCAACAATTTGGTGAAATGGCTGACCAGTTCAAATCGGACTATTTCAATATGCCAGTTCatATGGTCCCCACATCAACTGTGGAGAGAGAATTCTGGAGGGTTGTTTCATCAATTGATGAAGATGTCACAGTGGAGTATGGAGCGGATTTACACTCAATGGACCATGGATCAGgTTTTCCTACAAAAATGAGCGCACATCTATACCCTGGTGAGCAGCAGTATGCAGAATCAAGTTGGAACCTGAACAATCTGCCCGTGTTGGAGGGCTCAGTATTAGGACATATCAATGCTGACATATCAGGGATgaagATCCCGTGGTTGTACGTGGGCATGTGCTTTGCGACCTTCTGCTGGCACAATGAGGACCACTGGAGCTACTCCATCAACTACCTTCACTGGGGCGAGCCCAAGACATGGTATGGAGTCCCTGGCTCCAAAGCGGAGCAGTTCGAAGCGGCCATGAAGGCGGAGGCACCAGAGCTGTTCCAGTTGCAACCGGATTTACTTCATCAGCTCGTCACCATCATGAACCCCAATATTCTCATGAAGGCAGGGGTACCAGTTTATAGGACCGACCAACACGCTGGCGAATTCGTGATAACATTCCCTCGCGCCTACCACGCCGGCTTCAACCAGGGGTACAACTTCGCCGAGGCGGTCAACTTCACGCCAGCGGACTGGCTGAAGGTGGGGCGCGAGTGCATCGCGCACTACTCCACGCTGCGGCGGCCGTGCGTGTTCTCGCACGACGAGCTGGTGTGCAAGATGGCGCTGCGCGCGGAGCTGCTGGGCGCCGGCGAGGCGCTGGCGGCGCACCGCGACATGCGCACCATGCTGCACGACGAGCGCAAGCTGCGCAAGGCGCTGCTGGACTGGGGCGTGACGGAGGCGGAGCGCGAGGCGTTCGAGCTGCTGGCGGACGACTCGCGCCAGTGCCAGCTGTGCAAGACCACGTGCTTCCTGTCGTGCGTCACCTGCACCTGCACCACGCACGTGGCCTGCCTGCGCCACTTCCGCAGCCTCTGCGCCTGCGCGCCCGCCGCGCACAAACTCAGGTACCGCTACACGCTGGACGAGCTGCCCGCGATGCTTGAGAAGCTGAAGAAGAAGTCGGAGTCGTTCCGCGAGTGGGCGGAGGCGGTGCAGAACGCGCTCGACCCCGACACGCCTAAGACCTGCGACCTGGACGGGCTCAGGGCGCATCTGAGGAGAGCGCACGAGCTCAAGATGCACAAAACAGAGCTAGTGCGAGCATTGGAGACAGCCATCGAAGACGCGGAAAAATGTGCTTCGGTGATCCAGCAACTGGATTTGAACAAGATGCGGACTCGAACCCGCCACCACGACCCCAAGTACCGGCTCACCATCCACGAGCTCACGCTCTTCGCGCAGGAGATTGACGGCCTGGCTTGCGTATTGCCGGAGGGGTCGGCGGTAAAGGAAGTATTAAGACAGACAGAGGAGTTTGAAGACCGCGCGACAGAGTTGCTTAGTAAAGACTTGGAGGAAATTGACGCGGCCGGAATTCGGGAACTGGAGGAGGTGGTGGAGCTGGGGTCGCGGCTGTGCATCGTGCTGCCGCAGCTGGGCGGCGCGGCGGCGCGGCTGCAGCAGGCGCGCTGGCTGGAGGAGGCGCGCGCGCTGCGGGCCGACTGCGCCGCGCTCACGCCGCCGCAGCTCGAGCGCCTGCTGGCCGCGGCCGACGCGCTGCCGCCGCACCGCCGCCTGGAGCGCGAGCGCGCGCAGCTCATGGCGCTCAGGGCGCAAGTGGAGGAGTGGGAGCGGCGCGCGCAGGCCGTGCTGGCGGAGGGGCGCGCGGAGGGCGCGGCGGGCGAGGAGGTGCGGCACACGAGCCTGGCGGAGCTGGAGGCGCTGCTGGCGGACGGCGACGACGTGGAGGCCGCGCTGCCCACGCACCACGCGCTGCACCAGGCCGTGGCGCACGCCAAGGACTGGCTGGCCAAGGTGGAAGAAATGCAGTCAAAAGATTTGTACCCATACATGCATAGTGTTGAAAACTTGGTAAAGAAGGGACAACAGATACCATTGGCGCTCTTTGAGAAGGATCAACTAGCGGCCGCGTTGCAATCGGCAAAGGAATGGAAAAAGGGAGCTGCCGAAATGTTcttaaaaaagAAGTGGGCCTGGAGCCTCCTGGAGGCGCTGTCGCCGCGCGCGGAGGCGGGCGTGGGCGTGGGCGTGGGCAAGCGGCGCGCGCGCGACGCGGCCGACGCGCCCGCCTTCCTGCAGCACTTCAGCGAGGACGCCACGCCCACCGAGATCGTGGCGGCCTTCAAGCAGGCCGAGCAGCGGGAGCTGGCCGCCGTCAAGGAGCTCAGGGCTCGGAATATACGCAAGGACGTCCGTGCGCCTCCCACCGCGGGCGTGACGTTCTGCCTGTGCCAGAAACGACAATACGGAGTTATGTCCCAGTGCGAACTCTGCAAGGACTGGTTCCATGCCGCGTGCATTGCCAGCGCCCGCGAGGAGGACGAGGAGCGCGAGTCGGGGGCGGAGTCCCCGGAGCGGAGCCCCGCGGAGATGCCGTACCCGGGGGCGGAGCGCAAGTTCCTCTGCCCCTTGTGTACGCGCACCAAGCGGCCAAGGTTGCATCGCATCCTGGCACTACTGGTATGGCTCCAAAAGCTGCCCGTCAGATTAGCGGAAGGCGAAGCCCTACAGTGCGTGACGGAGCGCGCGATGGCGTGGCAGGACTCCGCCAGGGCGCTGCTCGCCTCGCTGCCTCACCAACAGCAGCCGAGCACAGGAAAGACAGCATATCACATGCCTCTAGGTATATCATCTGCAAGTGTGGAGCATGCTTACAGTGCGACACCTCGTTCGCCTAGCACGAGGGTCACTCCCGGACTACTACAGAAGTTGGAGGATCTCATGTTAGAAGGAGACCTTTTAGAgGTGCGGCTGGAGGAGCAGGCGCAGGTGTGGAGCGCGGCGTGGTGGTGGCGCGGCGCGGAGGGGCGGCGGGCGGGCGCGGCGCCGCTGCTGCGCGTGCCCGACGCGCCGCGCCGCAAGCGCACGCAGCGCGCGCCGCGCCCGCACGCGCAGCTCAAGCGCACGCGCCCCGTGCACGCGCACGCGCACCACGGAGCAAGCACTACAAAGGGTACCATAAAGCGTGGATCTGCAACGACAACAAACTACTTGAATAGAAAACAGGGCATCTCATCAGGTTCCGGTCTGATGATGAGGAAGCACTACATGGCGAGACAGGAGCGACGCAAACGAGGCCTGGCTGCCTCCACTCGGGGGAAACATCCAAGACAATCCAGATTAGCACAACACCGTGGCGCGAGTGCGAGCGCGACGAGTGCGGGCGCTGCGAGTGCGAGCGGGACGGCGACGTCCACGAGCGCGGGCGCACGACGCGGCAACGCCGCAGCTCGCCGGAGCAGCTCCTCCTCGGTGTCCTCCACTTCTTCGGACGAGGACTGCGCGGCTGACAATTGCCTGCGACCTACCGgcAAAGTAGACTGGGTGCAGTGCGACGGCGGCTGCGACCAGTGGTTCCACATGCACTGCGTCGGCCTGAGCCGGGGCGCGCTGCGAGAGGACGACGACTACGTGTGCGGCGCCTGCGCCAGAGACCGCCGCTGA
Protein Sequence
MGKCDEANVEVSMGDSASPMKPDNFTFTVPPEAPVFEPTPEEFLDPLAYISKIRPIAEKSGICKIKPPAAITRVKLNFLDQIIKFWELQGSVLKIPTVERKPLDLYSLHKIVKEAGGFEVCSAERKWSKIARRMGHPQGKGIGSILKSHYERILYPYDVFKNSGAVGDSKETKIEVKREQTPEKPPTSAARSRSASKCPAATPPPARRYKSSEPDPVAEGSHTEGALPGVERSLRTPVKDDVETRRSPRENKWMAGAASCGGGRSRRLREHRLSNMTVSVTPAPTPQPTLTTHNPDDPLAKYMCHVCGRGDVEEQMLLCDGCDDSYHTFCLVPPLADVPKGDWRCPVCLAEEVSKPAEAFGFEQASREYTLQQFGEMADQFKSDYFNMPVHMVPTSTVEREFWRVVSSIDEDVTVEYGADLHSMDHGSGFPTKMSAHLYPGEQQYAESSWNLNNLPVLEGSVLGHINADISGMKIPWLYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSKAEQFEAAMKAEAPELFQLQPDLLHQLVTIMNPNILMKAGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFTPADWLKVGRECIAHYSTLRRPCVFSHDELVCKMALRAELLGAGEALAAHRDMRTMLHDERKLRKALLDWGVTEAEREAFELLADDSRQCQLCKTTCFLSCVTCTCTTHVACLRHFRSLCACAPAAHKLRYRYTLDELPAMLEKLKKKSESFREWAEAVQNALDPDTPKTCDLDGLRAHLRRAHELKMHKTELVRALETAIEDAEKCASVIQQLDLNKMRTRTRHHDPKYRLTIHELTLFAQEIDGLACVLPEGSAVKEVLRQTEEFEDRATELLSKDLEEIDAAGIRELEEVVELGSRLCIVLPQLGGAAARLQQARWLEEARALRADCAALTPPQLERLLAAADALPPHRRLERERAQLMALRAQVEEWERRAQAVLAEGRAEGAAGEEVRHTSLAELEALLADGDDVEAALPTHHALHQAVAHAKDWLAKVEEMQSKDLYPYMHSVENLVKKGQQIPLALFEKDQLAAALQSAKEWKKGAAEMFLKKKWAWSLLEALSPRAEAGVGVGVGKRRARDAADAPAFLQHFSEDATPTEIVAAFKQAEQRELAAVKELRARNIRKDVRAPPTAGVTFCLCQKRQYGVMSQCELCKDWFHAACIASAREEDEERESGAESPERSPAEMPYPGAERKFLCPLCTRTKRPRLHRILALLVWLQKLPVRLAEGEALQCVTERAMAWQDSARALLASLPHQQQPSTGKTAYHMPLGISSASVEHAYSATPRSPSTRVTPGLLQKLEDLMLEGDLLEVRLEEQAQVWSAAWWWRGAEGRRAGAAPLLRVPDAPRRKRTQRAPRPHAQLKRTRPVHAHAHHGASTTKGTIKRGSATTTNYLNRKQGISSGSGLMMRKHYMARQERRKRGLAASTRGKHPRQSRLAQHRGASASATSAGAASASGTATSTSAGARRGNAAARRSSSSSVSSTSSDEDCAADNCLRPTGKVDWVQCDGGCDQWFHMHCVGLSRGALREDDDYVCGACARDRR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-