Lyun002851.1
Basic Information
- Insect
- Lamprigera yunnana
- Gene Symbol
- nfxl1
- Assembly
- GCA_013368075.1
- Location
- JABVZV010000424.1:1733120-1739409[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.85 8.2e+03 -2.9 1.4 14 19 162 167 162 167 0.86 2 19 0.15 1.4e+03 -0.5 0.8 4 10 198 204 197 204 0.95 3 19 3e-08 0.00029 20.9 17.0 1 19 212 229 212 229 0.99 4 19 2 1.9e+04 -4.3 0.5 6 10 255 259 255 262 0.51 5 19 2.5e-05 0.24 11.6 12.4 1 18 265 282 265 283 0.92 6 19 1.4 1.3e+04 -3.6 1.0 6 10 308 312 307 312 0.88 7 19 1.8e-06 0.017 15.2 11.2 1 19 318 336 318 336 0.94 8 19 1.8 1.7e+04 -3.9 0.7 6 10 361 365 360 367 0.58 9 19 6.1e-05 0.59 10.3 5.6 1 18 371 388 371 389 0.97 10 19 1.1e-05 0.11 12.7 15.6 3 18 425 440 423 441 0.92 11 19 9.2e-11 8.9e-07 28.9 12.9 1 18 450 467 450 468 0.97 12 19 2 1.9e+04 -5.8 2.9 10 13 507 510 507 511 0.86 13 19 0.2 1.9e+03 -0.9 6.0 10 19 517 526 515 526 0.90 14 19 0.015 1.4e+02 2.7 7.2 1 12 535 545 535 545 0.89 15 19 2 1.9e+04 -4.3 2.7 14 18 573 577 573 578 0.85 16 19 2.1e-05 0.2 11.8 3.4 1 11 614 624 614 625 0.97 17 19 0.0015 14 5.9 14.2 3 19 655 671 654 671 0.92 18 19 1.1e-05 0.11 12.7 10.4 1 16 714 728 714 734 0.93 19 19 0.7 6.8e+03 -2.7 0.7 5 10 763 768 763 768 0.93
Sequence Information
- Coding Sequence
- atgagcGGAAGACACAAAAAATCCGGCAATGCCTGGTTTAAAAAGGAATCGCAACCAAATAACCTCGGAGGGAATCAGCCCAAGATGAACAATtcggaaattaaatttaagcaaATACATGAGAAGTTCCAAGAGGCTGTTAAGAAACACACCAAAGAGTTTGATTCTTCTTCAGAAGAAGAGGAATTACAAACCAGTGATATAATAAGGAGTATTTCTAAGCATTACACTCAGAGTGGAGGAACTAACGATAATTTAAGTAGAACTAATGCATATTTAACGGATACTGTCACTTCTGGTGTTAACATATGTCTTATTTGTATATCTTCTATTAAAAGGATGGATAATATTTGGAATTGTGAAGAATGTTTTTCCATCCTTCATCTAATGTGCATTCAGCGTTGGGCAAAAGacaaagtttttcaattaaagCAATCATTGGTGGATGAAATTCCAACAAAAAAGACATTGAAAATTATGTGGGATTGCCCCAAGTGTAGGCAAAACTACAATCCATCAGACATTCCAAAAAAGTACCTGTGTTTCTGTAAGAAAACCGAAAACCCTTCTTTTCAGCCTTTGTTAGTTCCTCACTCGTGTGGTGAAacctgtcaaaaatatttgaaaccgTTGTGCGGGCACAAGTGTCTTTTGCTTTGTCATCCGGGACCGTGTCCGCCTTGTCCCCAAATAGTTAAGGTTACTTGTTACTGTGGTCATCAGCCACCAAAAGTACAACGATGCAGCAGTAAAGAGTGGTCTTGTGGCAAGCCTTGTGAAAAATTACTCTCTTGTAAAAATCACAGGTGCACTTCTCCTTGTCATACTGATGAATGTAAGCCATGCCTTAAAAAGAgcatacaaaaatgtgtttgcGGAGATAAAAGCAAGCTTAGGGATTGTTCAACACCAATTTGGCAATGTGATAAAGtctgtaataaattattagaatGCAACAAACATGATTGTTTAGAAGTTTGTCACATAGGCAATTGTGGACCTTGCACTTTATCCAAACCACGAACTTGTCCTTGTGGAAAGTCATCATATATTCTCGATTGTACTGAAGGAACGCCTACTTGTGGTGATACTTGTGAAAAATTGTTAGAATGTGGATATCACATATGTTTCCGCCGTTGCCATAAGGATAAATGTGGAATGTGTCTTGAACTAGTTAAAAAGAAATGCCGTTGTGGATTACAAACAAAAGAAGTTCAGTGTAAAAAAGATTATCTATGCGAAACTAAATGTAAAAAGCTCAAGGATTGTTATAAACACCAGTGCAATCGCAAGTGTTGTGAAGGTAATTGTCCTCCATGTGAAAAACCTTGTGGTCGCACTTTGAGCTGTGGAAATCACAAATGTAGTTCTGTTTGCCACAGAGGTCCATGTTATCCTTGCAATTTGACTGAAAACGTTACATGTAGGTGTGGAGGTACTTCTGTGGCTGTTCCATGcggtagaaaaaagaaaactaggCCACCTAGATGTCTTCTTCTGTGCAAGATTAAACCAAATTGCCATCATGGGAAACGAGAACCACACAACTGCCACTTCAACAGTTGTCCACCGTGTcaacaaatatgtaataaaaagcTATCCTGTTCACATAAGTGTCCCGTTACATGTCACACTgcagtttttattataaaagaagGCCAACAAGGATCAATGCCTTGGGAGCAAATTGCACCACAGCTTGTACAAAAAGCTTTGCCTTGTCCAGATTGCCttgttttagtttctgtaaCTTGTTTAGgGAAACATGAAACAGCCCAATGGCCTTGTTTTGCTGCAAAAGTAAATAGCTGTGGTAGAGAATGTGGACGGTTATTAGAATGCGGAAATCATAAGTGCTTTTTACCATGTCACTTGGTTGAAGATGCTAAAGATGAACTAAGTgCTGGCACTGATTGTATTCAATGTGAAAATGAGTGTTCAAAACCAAGACCAGATGGTTGTACTCATGCTTGTCTGAAGCCATGTCATCCTGATGAATGCCCATCATGTCAACAAATGTTACGGGTAAAATGTTTATGTGGACTTAATCAAATCTTTATCGAATGTGATGCTTGGACTTCATCTGCTAGTAAAGAAGACTTGGAAAGTTGTGGAAACCGATGCCCTAAAAATTATCCTTGTGGACACCGATGTCGGTCTAACTGTCATAATGGAGAATGCCCAAATGCTGAACTTTGTAAAAAACGAATAAAGGTAACATGCAGCTGCAAACGCATTAAAAAGGAATTTACTTGTGAAGAAGTACGTTCAGAAACAACTGTTGTTAAATGTGACGAAATATGCTTAGAAAAACAGCAAGAAGAgagtaaaataagaaatatggaaaatgaGAAGAAAAGAAGAGAGGAGGAAATTAAGAATTTACAAGAATTAGAAAAGTATGAAAAACTACTTCATGGGaagaaaaaacataaagaacgaaaatttgttaataaagtGGAAGAGCGAAGTTTATTTCAGAAGTATTGGGTAGTTATTGTTTCAGTTTGTGGATTTATAGCCTCtacacttatttattatttgttacattaa
- Protein Sequence
- MSGRHKKSGNAWFKKESQPNNLGGNQPKMNNSEIKFKQIHEKFQEAVKKHTKEFDSSSEEEELQTSDIIRSISKHYTQSGGTNDNLSRTNAYLTDTVTSGVNICLICISSIKRMDNIWNCEECFSILHLMCIQRWAKDKVFQLKQSLVDEIPTKKTLKIMWDCPKCRQNYNPSDIPKKYLCFCKKTENPSFQPLLVPHSCGETCQKYLKPLCGHKCLLLCHPGPCPPCPQIVKVTCYCGHQPPKVQRCSSKEWSCGKPCEKLLSCKNHRCTSPCHTDECKPCLKKSIQKCVCGDKSKLRDCSTPIWQCDKVCNKLLECNKHDCLEVCHIGNCGPCTLSKPRTCPCGKSSYILDCTEGTPTCGDTCEKLLECGYHICFRRCHKDKCGMCLELVKKKCRCGLQTKEVQCKKDYLCETKCKKLKDCYKHQCNRKCCEGNCPPCEKPCGRTLSCGNHKCSSVCHRGPCYPCNLTENVTCRCGGTSVAVPCGRKKKTRPPRCLLLCKIKPNCHHGKREPHNCHFNSCPPCQQICNKKLSCSHKCPVTCHTAVFIIKEGQQGSMPWEQIAPQLVQKALPCPDCLVLVSVTCLGKHETAQWPCFAAKVNSCGRECGRLLECGNHKCFLPCHLVEDAKDELSAGTDCIQCENECSKPRPDGCTHACLKPCHPDECPSCQQMLRVKCLCGLNQIFIECDAWTSSASKEDLESCGNRCPKNYPCGHRCRSNCHNGECPNAELCKKRIKVTCSCKRIKKEFTCEEVRSETTVVKCDEICLEKQQEESKIRNMENEKKRREEEIKNLQELEKYEKLLHGKKKHKERKFVNKVEERSLFQKYWVVIVSVCGFIASTLIYYLLH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -