Lyun009524.1
Basic Information
- Insect
- Lamprigera yunnana
- Gene Symbol
- stc
- Assembly
- GCA_013368075.1
- Location
- JABVZV010001778.1:12411-22797[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 2 1.9e+04 -4.1 1.6 15 19 382 386 381 386 0.81 2 13 6.8e-05 0.66 10.2 16.9 3 19 429 445 415 445 0.87 3 13 2 1.9e+04 -5.1 2.7 5 10 470 475 470 475 0.90 4 13 1.5e-06 0.014 15.5 13.2 1 19 481 499 481 499 0.93 5 13 1.3 1.2e+04 -3.5 0.5 5 10 528 533 528 536 0.69 6 13 5.3e-07 0.0052 16.9 14.1 1 19 539 557 539 557 0.94 7 13 4.2e-06 0.041 14.0 13.9 4 19 604 619 597 619 0.86 8 13 1.4 1.3e+04 -3.6 2.0 5 10 648 653 648 653 0.93 9 13 0.0028 27 5.0 11.0 1 11 659 669 659 681 0.91 10 13 4.2e-10 4.1e-06 26.8 14.2 1 19 686 704 686 704 0.98 11 13 3.4e-05 0.33 11.1 6.0 9 19 750 760 744 760 0.89 12 13 2.5e-06 0.025 14.7 21.5 1 18 796 814 796 818 0.96 13 13 6.3e-06 0.061 13.5 17.1 1 18 825 843 825 844 0.92
Sequence Information
- Coding Sequence
- ATGTCTTATTGGGGTTCAAATTCCCAACAACAATCTTTTCGTGGAGGTCGGGACGATTATCATTACAATTACGATGCCACATCGTATAACGTAACTGTTCCTTTGTGTAATCAAAATGTGCCCCCACAATACTACCCAAATCCACCTGCACAAGAAACTGGTGGCAATCACACTTCCCTCATGACGAATTCCGCAAATTGCAACTTCGGTGTAGCTTATGAAAATGGTCCTAGTGTATCAACGAGTGATCCAGGAGTTACTTCTTCACCAGTTTTTCATTCCAATTTGACACCGTTGGCTAAAGAATTTACTCCCGGTTCTAGTTCTCATAATACTGTTCAAAATGATAGTAAAAGACAGGGTGCTGTGAAGAAAAGCACATATTGGAACCAAGAAAGACGTTATTATGGTGACAAGAAACACAGAAACAATGATAGTGGGTATGGTAGGAACCGAACTTTTTATTCAAacccacaaaataatttaaaagattttaataaaagcaAGGAACAAAGTAAAATCCTGGAAGACACCAAACGGTTCTTACAACATGTTAAAACCATTGAAGATCAAAGAAATGTCATTGGTAGTGGTCCTGTACCCGCAACTATACCAGACAGTCACGGGTCCATTAAAAATAAGTCTCtagaaaaaaattacgtttcaaaGCCACATAGCACTACTAGTGCTGTAAAAGTGAACAAACCCAATGggtttcagaaaaataataatggtaGGAACTATAGAAATTACTATAAACAGGATTACTATGAGAACGATGTTAGAGGAAGAAATTTTGAAAGATGCAATCAAAACGAAAGTAATGAAATGCAAACTAATGAGCGAAGGAAACATCATGATAAGGGCAACAGTCAAAAAGAGGATGTCAATATAAAGAAAAGTTCAAACGAGCCTGTTGATAGTAGAAACTCggattttaatctaaaaaagaAACtggaTGCTGCATCTCAAAGAGAGAGGCTGGAGCAATTGGTAATACGGCGTTTATTAGAGTGTTTAGTATGTTGCGAAAGGTTACGTCACATGGACCAAATTTGGTCGTGCAAACAGTGCTATCATATTCTTCATTTGAATTGTACAATTCGATGGGCTCAGTCATCAAAATTGGACTCTGGTTGGAGATGTCCTGCTTGTCAAAATGTCTATGAAAATGTACCTACGGAATATCGTTGTTATTGTTTAAAAGAAGTTAATCCCATCTTAGATCCAGGTGCACTTCCACATAGTTGCGGATTGAGTTGTGGACGTAAAGGTCGTTCTTGCTTGCATAACTGTACTCTGATTTGTCATCCAGGACCATGTCCCGATTGCTCTGTGATGGTATCAAAATCTTGTGGATGTGGGGCCACAAAGCCTATCGTTAAATGTAGTTCCACTGTTCCTATTACATGTCAAAAGCAgtgtaataaaactttaaattgtgATATTCACACATGCAGTGGTAAGTGTCATGAAGGGGAATGCGAACCCTGCACTAACGTAATAAAGCAAGAATGTTATTGTGGCAAGGAAGGTCGTAAAATTGATTGCACAGTAGAAGCAAATTTAGAGACATTATACAAATGTGGTAAACCTTGTGAAAAGTTATTATCCTGTAAAAATCACAAGTGCGAACGCAATTGTCATGCTGGGGAGTGTTCTCCTTGTCCAAAAGCACCAACTGAAGCTACTACTTGTCCTTGCGGAAAGACAAAATTGGTACATGAAAGAGAATCGTGCCTTGATCCAATTCCTTGCTGTGATAAGACATGTTCAAAAAAGTTAGATTGCGGTCAGCCAAGTGCTCCGCATTTATGCAAACAGCCGTGTCACAGTGGACCATGTCTACCTTGCTCTGAAACTACAATGATACGTTGCCGTTGTGGTCACATggataaagaaattttatgtgTAGAACTTACTACAAAAGCAGATGATGCACGATGTGAAAAAAAGTGTGTTAAGaaacgtttGTGTGGAAAGCATAAGTGCAATCAATTGTGCTGCATTGAACTAGATCATATTTGCCCTCTGCCATGTAACCGTTTACTCTCGTGTGGACAGCATCGATGTGAAGAACCTTGTCATAAAGGAAGATGTTCACCTTGCTGGAGAACTAGTTTTGATGAATTATATTGTGAGTGTGGTTCTAGTGTTCTTTATCCACCAGTGGCTTGTGGTACACGACCACCTCCTTGTGATCAAATATGCTCTCGAGTTAGAACATGTAATCATGATGCTATGCATTCGTGTCATTCAGGTTCTTGTCCTCCATGCACTGTTCTAACAAAGCGTTGGTGTTATGGAAAACACGAACAACGTTCAACGATTCCTTGTCACCAGAATGATTTTAGTTGCGGTCTTCCTTGTGGACGTATTATGCCATGCGGAAAACACAAATGTCAACAGCCATGTCATGATGGACATTGTCGCACTCCATGCAATCAACCATGTCTTGAATCACGTGCAGAATGTGGACATCCATGCAGTCAACCGTGTCACGATGGGCCTTGTCCAGAAACTACTTGTAAACAAACAGTACAAGTTACATGCGAATGTGGGTTTAGAAAAAATAACCGCATTTGCGTAGACTTAATAAGCGAATATCAAAACATTACTATGGCGCAACTTGCCAGCAAAATTGAGCAAATGCAGTTTGGTCGAACTGTCGATATTACTGATCTTGTTAGTGGACAAAAACGGGGCTCTTTGAAAACtttggattGCAACGATGAATGTCGCCTCGTAGAACGCAATAGAAGATTGGCAATAGGATTGCAAATTCGAAATCCAGATTTAAGTGCAAAGTTAACACCGCGTTATTCAGATTATATGAGAAGTTGGGCTAAGaaagattcaaaattttgtcAGGATGTTCACGAAAAATTAACAGAATTAGTACATCTAGCGAagcaaagcaaacaaaaaagtaGAGCGTATTCGTTTAAATCGATGAATCGTGATAAACGTCACTTTGTTCATGAATATTGCGAACATTTTGGTTGCGATAGTGCCGCATATGATCTGGAACCAAACAGAAATGTTGTTGCTACGGCTTATAAAGACAAATCGTGGTTACCTAGTTATAGTTTGCTTGAAATTATTCAAAGAGAAAGTGGACAAAGGAAAGTACCTGGTCCACAGCAGCTTGGAAAAGGTAATGTCTCTAAACCCGAAACTGTATCTTTAAAATTACCAGGTCGTATTCCAAGACCTGCCACACCTCCTGCTGAATATGTTGATTACTTTAATAATCCTCCAGAGTAG
- Protein Sequence
- MSYWGSNSQQQSFRGGRDDYHYNYDATSYNVTVPLCNQNVPPQYYPNPPAQETGGNHTSLMTNSANCNFGVAYENGPSVSTSDPGVTSSPVFHSNLTPLAKEFTPGSSSHNTVQNDSKRQGAVKKSTYWNQERRYYGDKKHRNNDSGYGRNRTFYSNPQNNLKDFNKSKEQSKILEDTKRFLQHVKTIEDQRNVIGSGPVPATIPDSHGSIKNKSLEKNYVSKPHSTTSAVKVNKPNGFQKNNNGRNYRNYYKQDYYENDVRGRNFERCNQNESNEMQTNERRKHHDKGNSQKEDVNIKKSSNEPVDSRNSDFNLKKKLDAASQRERLEQLVIRRLLECLVCCERLRHMDQIWSCKQCYHILHLNCTIRWAQSSKLDSGWRCPACQNVYENVPTEYRCYCLKEVNPILDPGALPHSCGLSCGRKGRSCLHNCTLICHPGPCPDCSVMVSKSCGCGATKPIVKCSSTVPITCQKQCNKTLNCDIHTCSGKCHEGECEPCTNVIKQECYCGKEGRKIDCTVEANLETLYKCGKPCEKLLSCKNHKCERNCHAGECSPCPKAPTEATTCPCGKTKLVHERESCLDPIPCCDKTCSKKLDCGQPSAPHLCKQPCHSGPCLPCSETTMIRCRCGHMDKEILCVELTTKADDARCEKKCVKKRLCGKHKCNQLCCIELDHICPLPCNRLLSCGQHRCEEPCHKGRCSPCWRTSFDELYCECGSSVLYPPVACGTRPPPCDQICSRVRTCNHDAMHSCHSGSCPPCTVLTKRWCYGKHEQRSTIPCHQNDFSCGLPCGRIMPCGKHKCQQPCHDGHCRTPCNQPCLESRAECGHPCSQPCHDGPCPETTCKQTVQVTCECGFRKNNRICVDLISEYQNITMAQLASKIEQMQFGRTVDITDLVSGQKRGSLKTLDCNDECRLVERNRRLAIGLQIRNPDLSAKLTPRYSDYMRSWAKKDSKFCQDVHEKLTELVHLAKQSKQKSRAYSFKSMNRDKRHFVHEYCEHFGCDSAAYDLEPNRNVVATAYKDKSWLPSYSLLEIIQRESGQRKVPGPQQLGKGNVSKPETVSLKLPGRIPRPATPPAEYVDYFNNPPE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -